| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yaiN [C]
Identifier: 77459696
GI number: 77459696
Start: 3959450
End: 3959725
Strand: Reverse
Name: yaiN [C]
Synonym: Pfl01_3474
Alternate gene names: 77459696
Gene position: 3959725-3959450 (Counterclockwise)
Preceding gene: 77459697
Following gene: 77459695
Centisome position: 61.5
GC content: 63.04
Gene sequence:
>276_bases ATGTCGCACACGCACGAACACAAAGGCGAGTTGCTCAACCGGGTCCGGCGCATTGCCGGGCAGGTTCAGGCTGTTGAAAA AGCGCTGGAATCCGAGGCCGATTGTGCCAAGACGTTGCACCTGATGGCGGCGATTCGCGGCGCGGTCAATGGCTTGATGG AGCAGTTCATCGAGGCCCACGCCCGCGAGCATGTCGCCCGTCCCGACCTCAGCGACGAAGCCCGCGCCCAGGGCGTGGAA GAGTTGCTGCTGGCCATCCGCCGATATTCCAAGTGA
Upstream 100 bases:
>100_bases CGTCAAAAATTCAAGCTGCGACGGATGGTCGAAAACAGGCCTTGCCCCTCTCGATCGGAACAGCGACTATGCTCGCCATA TAGGGGTAGGGGGTATAGGT
Downstream 100 bases:
>100_bases GCGCCGACATCATGACCCTCAAGGTTGATGACTTTTCCCACAACCACCAGTTTCTCGGTGCTTCGCACGATGAAAACGCC CGCCGCACCCTGTGGGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSHTHEHKGELLNRVRRIAGQVQAVEKALESEADCAKTLHLMAAIRGAVNGLMEQFIEAHAREHVARPDLSDEARAQGVE ELLLAIRRYSK
Sequences:
>Translated_91_residues MSHTHEHKGELLNRVRRIAGQVQAVEKALESEADCAKTLHLMAAIRGAVNGLMEQFIEAHAREHVARPDLSDEARAQGVE ELLLAIRRYSK >Mature_90_residues SHTHEHKGELLNRVRRIAGQVQAVEKALESEADCAKTLHLMAAIRGAVNGLMEQFIEAHAREHVARPDLSDEARAQGVEE LLLAIRRYSK
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=91, Percent_Identity=42.8571428571429, Blast_Score=79, Evalue=8e-17, Organism=Escherichia coli, GI1788422, Length=66, Percent_Identity=48.4848484848485, Blast_Score=62, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 10180; Mature: 10049
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTHEHKGELLNRVRRIAGQVQAVEKALESEADCAKTLHLMAAIRGAVNGLMEQFIEAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREHVARPDLSDEARAQGVEELLLAIRRYSK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHTHEHKGELLNRVRRIAGQVQAVEKALESEADCAKTLHLMAAIRGAVNGLMEQFIEAH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREHVARPDLSDEARAQGVEELLLAIRRYSK HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA