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The map label for this gene is bkdR [H]

Identifier: 77459684

GI number: 77459684

Start: 3946653

End: 3947141

Strand: Reverse

Name: bkdR [H]

Synonym: Pfl01_3462

Alternate gene names: 77459684

Gene position: 3947141-3946653 (Counterclockwise)

Preceding gene: 77459690

Following gene: 77459681

Centisome position: 61.31

GC content: 59.3

Gene sequence:

>489_bases
ATGCGCAAACTGGACCGTACCGACATCGGCATTCTCAACAGCCTTCAGGAGAACGCGCGCATCACCAACGCCGACCTTGC
CCGTTCGGTCAATCTGTCGCCGACGCCGTGCTTCAACCGGGTCAAGGCGATGGAAGAGCTGGGGCTGATCCGCGAGCAGG
TGACGCTGCTGGATGCAGACCTGCTGGGCCTGCACGTCAACGTGTTCATCCACGTCAGTCTCGAGAAGCAGGTAGAGGAA
GCGCTGCAGCATTTCGAAGAAGCCATTTCCGATCGTCCCGAAGTCATGGAGTGCTACCTGATGGCCGGCGACCCTGACTA
CTTGATCCGGGTGCTGGTGCCGACCATTCAGTCGCTCGAACGCTTCATGATGGACTTTCTGACCAAGGTGCCGGGCGTGG
CCAACATTCGGTCAAGTTTTGCGCTCAAGCAGGTGCGCTATAAGACGGCATTGCCGCTGCCGGCGAACGGTTTGACGCTG
GGCAACTGA

Upstream 100 bases:

>100_bases
AGGCCCGGGCAAGAAGAATATTTCTCTCTGTTTCGTTGCACTGGAGATCATTTGCAGATAGAAATTCTGCATAAACATAA
AAAACAGGTGGTTTTGTCTC

Downstream 100 bases:

>100_bases
ATCCGGTGCCGTTCACAGGTATTCATATCGATAACCCAGTTCTTCGGTAAAAAGAGTCTGCTCAATGGTGAAGCTTTGAG
GCCACGGAGCGAGTTCGTTT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRKLDRTDIGILNSLQENARITNADLARSVNLSPTPCFNRVKAMEELGLIREQVTLLDADLLGLHVNVFIHVSLEKQVEE
ALQHFEEAISDRPEVMECYLMAGDPDYLIRVLVPTIQSLERFMMDFLTKVPGVANIRSSFALKQVRYKTALPLPANGLTL
GN

Sequences:

>Translated_162_residues
MRKLDRTDIGILNSLQENARITNADLARSVNLSPTPCFNRVKAMEELGLIREQVTLLDADLLGLHVNVFIHVSLEKQVEE
ALQHFEEAISDRPEVMECYLMAGDPDYLIRVLVPTIQSLERFMMDFLTKVPGVANIRSSFALKQVRYKTALPLPANGLTL
GN
>Mature_162_residues
MRKLDRTDIGILNSLQENARITNADLARSVNLSPTPCFNRVKAMEELGLIREQVTLLDADLLGLHVNVFIHVSLEKQVEE
ALQHFEEAISDRPEVMECYLMAGDPDYLIRVLVPTIQSLERFMMDFLTKVPGVANIRSSFALKQVRYKTALPLPANGLTL
GN

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34.6666666666667, Blast_Score=111, Evalue=2e-26,
Organism=Escherichia coli, GI1787116, Length=150, Percent_Identity=34, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18221; Mature: 18221

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLDRTDIGILNSLQENARITNADLARSVNLSPTPCFNRVKAMEELGLIREQVTLLDAD
CCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLHVNVFIHVSLEKQVEEALQHFEEAISDRPEVMECYLMAGDPDYLIRVLVPTIQSLE
HHHEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCHHHHHHHHHHHHHHHH
RFMMDFLTKVPGVANIRSSFALKQVRYKTALPLPANGLTLGN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRKLDRTDIGILNSLQENARITNADLARSVNLSPTPCFNRVKAMEELGLIREQVTLLDAD
CCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLHVNVFIHVSLEKQVEEALQHFEEAISDRPEVMECYLMAGDPDYLIRVLVPTIQSLE
HHHEEEEEEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCHHHHHHHHHHHHHHHH
RFMMDFLTKVPGVANIRSSFALKQVRYKTALPLPANGLTLGN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]