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The map label for this gene is yiiZ [H]

Identifier: 77459676

GI number: 77459676

Start: 3939367

End: 3940338

Strand: Direct

Name: yiiZ [H]

Synonym: Pfl01_3454

Alternate gene names: 77459676

Gene position: 3939367-3940338 (Clockwise)

Preceding gene: 77459675

Following gene: 77459677

Centisome position: 61.19

GC content: 59.57

Gene sequence:

>972_bases
ATGGACTTCAAACGCACGTTGCTCGCCGCCGCTCTCCCCCTCGCGCTCACCTTCGGCAGCGCCGCCCAGGCACTGGAAAT
CAAATTCGCCGACATCCACCCCGCCGGGTATCCGACCGTGGTCGCTGAAGAACAGTTGGGCAAGACCCTGGTTGCCGAAA
GTGACGGCAAGCTGACCTTCAAAATGTTTCCCGGCGGCGTGCTCGGCTCGGAAAAGGAAGTGGTCGAACAGGCTCAGGTG
GGCGCCATTCAAATGGCCCGCGTCAGCCTCGGTATCGTCGGTCCGGTGGTGCCGGACGTAAACGTGTTCAACATGCCGTT
CGTGTTCCGTGACCAGGCGCACATGCGCAAGATTATCGACGGTGAAATCGGTGACGAAATCCTCGACAAGATCACCCAAT
CCGAATTCAACCTCGTCGCCCTGGCGTGGATGGACGGCGGCACGCGCAACATCTACACCAAGAAACCGGTGCGCAGCCTT
GAAGACCTCAAGGGCATGAAAATCCGTGTGCAGGGCAACCCGATGTTCATCGAAACCATCAACGCCATGGGCGGCAACGG
GATCGCCATGGACACCGGCGAAATCTTCAGTGCGCTGCAGACCGGCGTCATCGACGGTGCGGAAAACAATCCGCCGACCC
TGCTCGAACACAACCATTACCAGAACGCCAAGTTCTACAGCCTGACCGGGCACCTGATCCTGCCCGAGCCCATCGTGATG
TCGAAAATCACCTGGGACAAACTCACCCCCGATCAGCAGACGCTGGTGAAGAAAGCCGCCAAGGCTGCGCAGGCTCAGGA
GCGCACGCTGTGGGACGCCAAGTCCGTCAGCAGTGAGGAAAAACTCAAGGCGGCCGGCGTAGAGTTCATCACCGTCGACA
AGAAGCCCTTCTATGAGGCCACCGCCTCGATCCGTGAAAAATACGGCGCGCCCTACGCCGACCTGATCAAGCGCATCGAA
GCCGTTCAGTAA

Upstream 100 bases:

>100_bases
CATAAAAGGCCTGCCGGAGCCATTGTTCGACGACCTGCTGTAACCCCCTGCTGCATCGCTGTGCCTTGAACACAAAAATA
ACAAGACTGGAGAACCCCTC

Downstream 100 bases:

>100_bases
ACCTCCCAGCCCTCTGCAAAAGGCCCGGCAGCGCTGACGTCGCCTGATGTCCGCGCGTGCCCGGTTACGGTGGAACCCGA
TGAAGAATTTGCTGCTGCGC

Product: TRAP dicarboxylate transporter subunit DctP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MDFKRTLLAAALPLALTFGSAAQALEIKFADIHPAGYPTVVAEEQLGKTLVAESDGKLTFKMFPGGVLGSEKEVVEQAQV
GAIQMARVSLGIVGPVVPDVNVFNMPFVFRDQAHMRKIIDGEIGDEILDKITQSEFNLVALAWMDGGTRNIYTKKPVRSL
EDLKGMKIRVQGNPMFIETINAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHYQNAKFYSLTGHLILPEPIVM
SKITWDKLTPDQQTLVKKAAKAAQAQERTLWDAKSVSSEEKLKAAGVEFITVDKKPFYEATASIREKYGAPYADLIKRIE
AVQ

Sequences:

>Translated_323_residues
MDFKRTLLAAALPLALTFGSAAQALEIKFADIHPAGYPTVVAEEQLGKTLVAESDGKLTFKMFPGGVLGSEKEVVEQAQV
GAIQMARVSLGIVGPVVPDVNVFNMPFVFRDQAHMRKIIDGEIGDEILDKITQSEFNLVALAWMDGGTRNIYTKKPVRSL
EDLKGMKIRVQGNPMFIETINAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHYQNAKFYSLTGHLILPEPIVM
SKITWDKLTPDQQTLVKKAAKAAQAQERTLWDAKSVSSEEKLKAAGVEFITVDKKPFYEATASIREKYGAPYADLIKRIE
AVQ
>Mature_323_residues
MDFKRTLLAAALPLALTFGSAAQALEIKFADIHPAGYPTVVAEEQLGKTLVAESDGKLTFKMFPGGVLGSEKEVVEQAQV
GAIQMARVSLGIVGPVVPDVNVFNMPFVFRDQAHMRKIIDGEIGDEILDKITQSEFNLVALAWMDGGTRNIYTKKPVRSL
EDLKGMKIRVQGNPMFIETINAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHYQNAKFYSLTGHLILPEPIVM
SKITWDKLTPDQQTLVKKAAKAAQAQERTLWDAKSVSSEEKLKAAGVEFITVDKKPFYEATASIREKYGAPYADLIKRIE
AVQ

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790004, Length=330, Percent_Identity=31.8181818181818, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35336; Mature: 35336

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFKRTLLAAALPLALTFGSAAQALEIKFADIHPAGYPTVVAEEQLGKTLVAESDGKLTF
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEHHHHCCEEEECCCCCEEE
KMFPGGVLGSEKEVVEQAQVGAIQMARVSLGIVGPVVPDVNVFNMPFVFRDQAHMRKIID
EECCCCCCCCHHHHHHHHHCCHHEEHHHHHHECCCCCCCCEEECCCEEECCHHHHHHHHC
GEIGDEILDKITQSEFNLVALAWMDGGTRNIYTKKPVRSLEDLKGMKIRVQGNPMFIETI
CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEECCHHHHHHHCCCCEEEECCCCEEEEEE
NAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHYQNAKFYSLTGHLILPEPIVM
CCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEECCEECCCCHHH
SKITWDKLTPDQQTLVKKAAKAAQAQERTLWDAKSVSSEEKLKAAGVEFITVDKKPFYEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCCHHHH
TASIREKYGAPYADLIKRIEAVQ
HHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDFKRTLLAAALPLALTFGSAAQALEIKFADIHPAGYPTVVAEEQLGKTLVAESDGKLTF
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEHHHHCCEEEECCCCCEEE
KMFPGGVLGSEKEVVEQAQVGAIQMARVSLGIVGPVVPDVNVFNMPFVFRDQAHMRKIID
EECCCCCCCCHHHHHHHHHCCHHEEHHHHHHECCCCCCCCEEECCCEEECCHHHHHHHHC
GEIGDEILDKITQSEFNLVALAWMDGGTRNIYTKKPVRSLEDLKGMKIRVQGNPMFIETI
CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEECCHHHHHHHCCCCEEEECCCCEEEEEE
NAMGGNGIAMDTGEIFSALQTGVIDGAENNPPTLLEHNHYQNAKFYSLTGHLILPEPIVM
CCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEEECCEECCCCHHH
SKITWDKLTPDQQTLVKKAAKAAQAQERTLWDAKSVSSEEKLKAAGVEFITVDKKPFYEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEEECCCCHHHH
TASIREKYGAPYADLIKRIEAVQ
HHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609; 7729880 [H]