Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459675

Identifier: 77459675

GI number: 77459675

Start: 3938416

End: 3939309

Strand: Direct

Name: 77459675

Synonym: Pfl01_3453

Alternate gene names: NA

Gene position: 3938416-3939309 (Clockwise)

Preceding gene: 77459674

Following gene: 77459676

Centisome position: 61.17

GC content: 64.54

Gene sequence:

>894_bases
ATGCAAGCCGAATTGATCGTCGACGCCCGCAACGCGGTGGGTGAAAGCCCGGTGTGGGTGCCGCAGGAAAATGCGCTCTA
CTGGGTCGATATCCCCAACGGTGGCCTGCAACGCTGGGATGCCGACACTGGCCATGTTCACGCCTGGAAGGCTCCCGAGA
TGCTCGCCTGCCTCGCCCGACACAGCCGGGGCGGCTGGGTGGCCGGTATGGAGAGCGGGTTCTTTCAACTGCGCCCCCAC
AGCGATGGCAGCCTTGACAGCGACCTGCTCGCGACCGTGGAACACAGCCGCCAGGACATGCGCCTGAACGACGGCCGCTG
CGACCGTCAGGGCCGGTTCTGGGCCGGCAGCATGGTGCTGAACATGGGCCTGAATCTGCCCGAAGGCCGGCTCTATCGCT
ACGCCGCCGGGCAAACAGGCGCGATCGAGGCACAGCTTGATGGCTTCATCGTGCCCAACGGTCTGGGCTTCAGTCCGGAC
GGCAAAACCATGTACCTGTCGGACTCGCACCCGAACGTGCAACTGATCTGGGCCTTCGATTACGACATTGCCAGCGGCAC
CCCCTCCAACCGACGGGTGTTCGTGGACATGAACCATTTTTACGGCCGTCCCGACGGCGCTGCCGTGGATGCCGATGGCT
GCTACTGGATCTGCGCCAACGATGTCGGCCTGATCCACCGGTTCACCCCGGAAGGTCGCCTTGACCGCTCGCTGCCGGTA
CCGGTGAAAAAACCCACCATGTGCGCCTTCGGTGGCAGCCGGATGGACACCTTGTTCGTGACCTCGATCCGCCCCGCCGA
CGACCAGGACCCGCATTCGCTGGCCGGCGGCGTGTTCGCCCTCAACCCCGGCATAAAAGGCCTGCCGGAGCCATTGTTCG
ACGACCTGCTGTAA

Upstream 100 bases:

>100_bases
ACCCGGCGCGGATCTATCAGGGCGGGGCCTTCGTTGCGGCCGGCCCGTTCGGCGATTGACCGGCGCGATTCACGTCTCCA
ATAAAACCAAGGGAATGAGT

Downstream 100 bases:

>100_bases
CCCCCTGCTGCATCGCTGTGCCTTGAACACAAAAATAACAAGACTGGAGAACCCCTCATGGACTTCAAACGCACGTTGCT
CGCCGCCGCTCTCCCCCTCG

Product: gluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQAELIVDARNAVGESPVWVPQENALYWVDIPNGGLQRWDADTGHVHAWKAPEMLACLARHSRGGWVAGMESGFFQLRPH
SDGSLDSDLLATVEHSRQDMRLNDGRCDRQGRFWAGSMVLNMGLNLPEGRLYRYAAGQTGAIEAQLDGFIVPNGLGFSPD
GKTMYLSDSHPNVQLIWAFDYDIASGTPSNRRVFVDMNHFYGRPDGAAVDADGCYWICANDVGLIHRFTPEGRLDRSLPV
PVKKPTMCAFGGSRMDTLFVTSIRPADDQDPHSLAGGVFALNPGIKGLPEPLFDDLL

Sequences:

>Translated_297_residues
MQAELIVDARNAVGESPVWVPQENALYWVDIPNGGLQRWDADTGHVHAWKAPEMLACLARHSRGGWVAGMESGFFQLRPH
SDGSLDSDLLATVEHSRQDMRLNDGRCDRQGRFWAGSMVLNMGLNLPEGRLYRYAAGQTGAIEAQLDGFIVPNGLGFSPD
GKTMYLSDSHPNVQLIWAFDYDIASGTPSNRRVFVDMNHFYGRPDGAAVDADGCYWICANDVGLIHRFTPEGRLDRSLPV
PVKKPTMCAFGGSRMDTLFVTSIRPADDQDPHSLAGGVFALNPGIKGLPEPLFDDLL
>Mature_297_residues
MQAELIVDARNAVGESPVWVPQENALYWVDIPNGGLQRWDADTGHVHAWKAPEMLACLARHSRGGWVAGMESGFFQLRPH
SDGSLDSDLLATVEHSRQDMRLNDGRCDRQGRFWAGSMVLNMGLNLPEGRLYRYAAGQTGAIEAQLDGFIVPNGLGFSPD
GKTMYLSDSHPNVQLIWAFDYDIASGTPSNRRVFVDMNHFYGRPDGAAVDADGCYWICANDVGLIHRFTPEGRLDRSLPV
PVKKPTMCAFGGSRMDTLFVTSIRPADDQDPHSLAGGVFALNPGIKGLPEPLFDDLL

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=298, Percent_Identity=32.2147651006711, Blast_Score=143, Evalue=2e-34,
Organism=Homo sapiens, GI4759036, Length=298, Percent_Identity=32.2147651006711, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24646912, Length=294, Percent_Identity=27.5510204081633, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24646910, Length=294, Percent_Identity=27.5510204081633, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24641471, Length=301, Percent_Identity=26.578073089701, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI18860103, Length=301, Percent_Identity=26.578073089701, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24641469, Length=301, Percent_Identity=26.578073089701, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI45551448, Length=301, Percent_Identity=26.578073089701, Blast_Score=98, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32629; Mature: 32629

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAELIVDARNAVGESPVWVPQENALYWVDIPNGGLQRWDADTGHVHAWKAPEMLACLAR
CCCEEEEECHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHH
HSRGGWVAGMESGFFQLRPHSDGSLDSDLLATVEHSRQDMRLNDGRCDRQGRFWAGSMVL
CCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECEEEE
NMGLNLPEGRLYRYAAGQTGAIEAQLDGFIVPNGLGFSPDGKTMYLSDSHPNVQLIWAFD
ECCCCCCCCCEEEEECCCCCEEEEEECCEEECCCCCCCCCCCEEEEECCCCCEEEEEEEE
YDIASGTPSNRRVFVDMNHFYGRPDGAAVDADGCYWICANDVGLIHRFTPEGRLDRSLPV
CCCCCCCCCCCEEEEECHHHCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCCC
PVKKPTMCAFGGSRMDTLFVTSIRPADDQDPHSLAGGVFALNPGIKGLPEPLFDDLL
CCCCCCEEEECCCCCEEEEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHCC
>Mature Secondary Structure
MQAELIVDARNAVGESPVWVPQENALYWVDIPNGGLQRWDADTGHVHAWKAPEMLACLAR
CCCEEEEECHHHCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHH
HSRGGWVAGMESGFFQLRPHSDGSLDSDLLATVEHSRQDMRLNDGRCDRQGRFWAGSMVL
CCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECEEEE
NMGLNLPEGRLYRYAAGQTGAIEAQLDGFIVPNGLGFSPDGKTMYLSDSHPNVQLIWAFD
ECCCCCCCCCEEEEECCCCCEEEEEECCEEECCCCCCCCCCCEEEEECCCCCEEEEEEEE
YDIASGTPSNRRVFVDMNHFYGRPDGAAVDADGCYWICANDVGLIHRFTPEGRLDRSLPV
CCCCCCCCCCCEEEEECHHHCCCCCCCEEECCCEEEEEECCCEEEEEECCCCCCCCCCCC
PVKKPTMCAFGGSRMDTLFVTSIRPADDQDPHSLAGGVFALNPGIKGLPEPLFDDLL
CCCCCCEEEECCCCCEEEEEEEECCCCCCCCHHHCCCEEEECCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA