| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is dht [H]
Identifier: 77459663
GI number: 77459663
Start: 3924919
End: 3926358
Strand: Direct
Name: dht [H]
Synonym: Pfl01_3441
Alternate gene names: 77459663
Gene position: 3924919-3926358 (Clockwise)
Preceding gene: 77459657
Following gene: 77459664
Centisome position: 60.96
GC content: 62.64
Gene sequence:
>1440_bases ATGTCTCTGTTGATCCGTGGCGCCACCATTGTTACCCATGATGAAAGTTACCGCGCCGATGTCTATTGCGCTGACGGCGT GATCAAAGCCATTGGTGAAAACCTGGATATTCCCGCCGGCGCCGAAGTGCTCGACGGCAGCGGACAATACCTGATGCCCG GCGGCATCGATCCGCACACCCACATGCAACTCCCGTTCATGGGCACCGTGGCCAGCGAAGACTTCTACAGCGGCACCGCC GCAGGCCTGGCCGGAGGCACCACTTCGATCATCGATTTCGTGATTCCCAATCCGCAGCAGTCACTGCTCGAAGCGTTTCA CCAGTGGCGTGGCTGGGCGGAAAAATCCGCGTCCGACTACGGCTTCCACGTCGCGATTACCTGGTGGAGTGAGCAGGTGC GTGAGGAAATGGCCGAGCTGGTCAGCCATCACGGGATCAACAGCTTCAAGCATTTCATGGCTTACAAGAACGCGATCATG GCCGCCGACGACACGCTGGTGGCGAGCTTCGAGCGCTGCCTGGAACTCGGCGCGGTGCCGACCGTGCACGCAGAAAACGG CGAGCTGGTCTATCACCTGCAACGCAAGTTGATGGCCCAGGGCATCACCGGGCCGGAAGCGCATCCGCTGTCGCGGCCCT CGCAGGTCGAAGGCGAAGCCGCGAGCCGGGCAATCCGGATCGCTGAAACCATCGGCACGCCGCTGTACCTGGTGCACGTC TCGACCAAGGAAGCCCTCGACGAAATCACCTATGCCCGCAGCAAGGGCCAACCGGTTTACGGCGAAGTGCTGGCCGGGCA TCTGCTGCTGGACGACAGTGTCTATCAGCATCCGGACTGGCAGACCGCCGCCGGTTATGTGATGAGCCCGCCGTTCCGTC CGCGCGGGCATCAGGATGCGCTGTGGCATGGTTTGCAGAGCGGCAATCTGCACACCACCGCCACCGACCATTGCTGCTTC TGCGCCGAGCAGAAAGCCGCCGGCCGCGACGACTTCAGCAAGATCCCCAACGGCACTGCCGGCATCGAAGACCGCATGGC GGTGTTGTGGGATGAAGGGGTGAATTCGGGGCGATTGTCGATGCAGGACTTCGTCGCCCTCACCTCCACCAACACTGCAA AGATCTTCAACCTCTACCCGCGCAAGGGCGCGATCCGCGTCGGCGCCGATGCCGACCTGGTGCTGTGGGACCCGCAAGGC ACCCGCACCATCTCCGCCAAGACCCACCATCAGCAGGTGGACTTCAACATCTTCGAAGGCAAGACCGTGACCGGTGTGCC GAGCCATACCGTCAGCCAGGGCCGGGTGGTCTGGGCCGACGGTGACCTGCGCGCCGAGCGTGGGGCGGGCCGGTATATCG AACGGCCGGCGTATCCGGCGGTGTTTGATTTGCTGAGCAAGCGGGCTGAGCAACATAAGCCTACTGCTGTGAAACGCTGA
Upstream 100 bases:
>100_bases CGTCTATTCCTGACAGCGCTGACAAGATTACGCATTTGGCGCTGCAGACAATAAAACACTAGAACCGACACAAGTCGGTC ATGCCTGCGAGGAACTCGGA
Downstream 100 bases:
>100_bases AAGCGGCCTTCGGCCTCATCGCGGGCAAGCCCGCTCCCACAGGTTTTATGCGCGCCGTAGATCCCTGTGGGAGCTGGCTT GCCAGCGATGAGGCCAGTTC
Product: phenylhydantoinase
Products: NA
Alternate protein names: DHPase [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSLLIRGATIVTHDESYRADVYCADGVIKAIGENLDIPAGAEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFYSGTA AGLAGGTTSIIDFVIPNPQQSLLEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIM AADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQGITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHV STKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQDALWHGLQSGNLHTTATDHCCF CAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLSMQDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQG TRTISAKTHHQQVDFNIFEGKTVTGVPSHTVSQGRVVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAEQHKPTAVKR
Sequences:
>Translated_479_residues MSLLIRGATIVTHDESYRADVYCADGVIKAIGENLDIPAGAEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFYSGTA AGLAGGTTSIIDFVIPNPQQSLLEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIM AADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQGITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHV STKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQDALWHGLQSGNLHTTATDHCCF CAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLSMQDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQG TRTISAKTHHQQVDFNIFEGKTVTGVPSHTVSQGRVVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAEQHKPTAVKR >Mature_478_residues SLLIRGATIVTHDESYRADVYCADGVIKAIGENLDIPAGAEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFYSGTAA GLAGGTTSIIDFVIPNPQQSLLEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIMA ADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQGITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHVS TKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQDALWHGLQSGNLHTTATDHCCFC AEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLSMQDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQGT RTISAKTHHQQVDFNIFEGKTVTGVPSHTVSQGRVVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAEQHKPTAVKR
Specific function: Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N-carbamoyl-D-amino acids [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=484, Percent_Identity=52.6859504132231, Blast_Score=505, Evalue=1e-143, Organism=Homo sapiens, GI4503377, Length=468, Percent_Identity=47.6495726495726, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI4503379, Length=476, Percent_Identity=45.7983193277311, Blast_Score=453, Evalue=1e-127, Organism=Homo sapiens, GI4503051, Length=459, Percent_Identity=47.9302832244009, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI62422571, Length=459, Percent_Identity=47.9302832244009, Blast_Score=445, Evalue=1e-125, Organism=Homo sapiens, GI190194363, Length=468, Percent_Identity=47.4358974358974, Blast_Score=444, Evalue=1e-125, Organism=Homo sapiens, GI19923821, Length=482, Percent_Identity=43.5684647302905, Blast_Score=413, Evalue=1e-115, Organism=Homo sapiens, GI18105007, Length=242, Percent_Identity=26.0330578512397, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI87082175, Length=469, Percent_Identity=35.8208955223881, Blast_Score=305, Evalue=4e-84, Organism=Escherichia coli, GI1786722, Length=450, Percent_Identity=27.5555555555556, Blast_Score=154, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17539558, Length=484, Percent_Identity=48.7603305785124, Blast_Score=462, Evalue=1e-130, Organism=Caenorhabditis elegans, GI71989490, Length=483, Percent_Identity=45.5486542443064, Blast_Score=443, Evalue=1e-125, Organism=Caenorhabditis elegans, GI86575075, Length=469, Percent_Identity=34.1151385927505, Blast_Score=278, Evalue=6e-75, Organism=Caenorhabditis elegans, GI193204318, Length=446, Percent_Identity=24.4394618834081, Blast_Score=89, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6322218, Length=410, Percent_Identity=25.3658536585366, Blast_Score=108, Evalue=1e-24, Organism=Drosophila melanogaster, GI221377917, Length=483, Percent_Identity=48.6542443064182, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI17137462, Length=481, Percent_Identity=47.4012474012474, Blast_Score=448, Evalue=1e-126, Organism=Drosophila melanogaster, GI24644287, Length=297, Percent_Identity=49.4949494949495, Blast_Score=295, Evalue=5e-80, Organism=Drosophila melanogaster, GI24644289, Length=232, Percent_Identity=51.7241379310345, Blast_Score=251, Evalue=6e-67, Organism=Drosophila melanogaster, GI24642586, Length=409, Percent_Identity=27.3838630806846, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI18859883, Length=417, Percent_Identity=25.8992805755396, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.2.2 [H]
Molecular weight: Translated: 52400; Mature: 52269
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLIRGATIVTHDESYRADVYCADGVIKAIGENLDIPAGAEVLDGSGQYLMPGGIDPHT CCEEEECCEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCCCEECCCCCEEECCCCCCCC HMQLPFMGTVASEDFYSGTAAGLAGGTTSIIDFVIPNPQQSLLEAFHQWRGWAEKSASDY EEECCEEEEECCCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHCCCCCC GFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVP CEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCC TVHAENGELVYHLQRKLMAQGITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHV EEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE STKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQDA CHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCHHCCCCCCCCCCCEECCCCCCCCCHHH LWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLS HHHCCCCCCEEECCCCCEEEECCHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCC MQDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQGTRTISAKTHHQQVDFNIFEG HHHEEEEECCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCCEECEEEECC KTVTGVPSHTVSQGRVVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAEQHKPTAVKR CEEECCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLLIRGATIVTHDESYRADVYCADGVIKAIGENLDIPAGAEVLDGSGQYLMPGGIDPHT CEEEECCEEEECCCCCCEEEEECCHHHHHHCCCCCCCCCCCEECCCCCEEECCCCCCCC HMQLPFMGTVASEDFYSGTAAGLAGGTTSIIDFVIPNPQQSLLEAFHQWRGWAEKSASDY EEECCEEEEECCCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHCCCCCC GFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVP CEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCC TVHAENGELVYHLQRKLMAQGITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHV EEECCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE STKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQDA CHHHHHHHHHHHHCCCCCCHHHHHHCEEEECCCHHCCCCCCCCCCCEECCCCCCCCCHHH LWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLS HHHCCCCCCEEECCCCCEEEECCHHCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCC MQDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQGTRTISAKTHHQQVDFNIFEG HHHEEEEECCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCCEECEEEECC KTVTGVPSHTVSQGRVVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAEQHKPTAVKR CEEECCCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]