| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459657
Identifier: 77459657
GI number: 77459657
Start: 3917648
End: 3919075
Strand: Direct
Name: 77459657
Synonym: Pfl01_3435
Alternate gene names: NA
Gene position: 3917648-3919075 (Clockwise)
Preceding gene: 77459656
Following gene: 77459663
Centisome position: 60.85
GC content: 58.05
Gene sequence:
>1428_bases ATGACGATCACATTGGGCCCGATCATCGGGCACACCACGGACACGTCGGCTAAAATCTGGATACGCGGGGAAGCTAATGA TGACAAGGAGGCGAAGCGGTTTTGTGTCGGCCTGATCGATGTATTCAAGGGCAAGACCTGGGTCACGTCGTGCCGCTGTT TCCTGCGTGACTACTATGACTTCACCGGTGCGGTAGAACTCAGTGAACTGAAACCCGCCACGGCCTATCGCGTGGTCTGC AACACGACCTACGTCAGCGATGAACTGGAGGTCACCCGACTGGTCAGGGACGACAAACCCGTCCGCCCGCTCAACCGTGC GGAAGAATCCGTCGAAGGGACGTTCACCACCGACCGGGCACCCGCTGACGGCACGCTGAACTTTGTATTCGGCTCGTGCC GTTATCTGTACTGGGACAACGTCTTTCAGAGTGATGCGGAAAAAGGCGACAAGACATTCCGCTCGATTGTCGAAAAACAT TCGCAGAAACCTTTCGACCTGACGCTGATGATCGGCGACCAGGTGTATCTCGATCCGCTGAATGCGCTGCGCCAGTACAG CACGCTTGAAGAAATGTTCGACATCTATCGTCAGGCCTTCGGCCTGCCCTGGATCCGGCAGATGATGAACCGGATCCCGA CCTACATGATCCTTGACGATCACGAGATCCGCGACGACTGGTCGCGAGAGAAACTCGACGATGTCGGCAAAGGCTTTTAC GTCAGTGCGATGCGTGGTTATGAGTCCTACCAGCATTTGCACAACCCGGCGACGCCCAAGGGCCAGTACTGGTACACCTT CCAGAAAGGTGCCTTTCCGTTTTTCGTGATGGACACCCGAACCCAGCGTATCCGTGAGCCGTCGTCGATCGAACCGCGCT CGGTGCTGGGGCGCGAACAGCTCAATGCGTTCCTGACGTGGCTGAGTGAGCATCGGGGGGCGCCGATGATCTTTGTGGTC TCGAGCGTGCCGTTCTTCCCCGATCCGAAATCCGGAGACGACAAGTGGGTGGGCTTTCCGGAGGAGCGCAGCATCATTCT GGAGTTCATCCGGGTCGAGAAGATCAGCAATGTCGTCGTGTTGTCCGGCGACGTGCACAACAGCTGCTTCGCCGGCATGC GTTGCTACCAGGACCCGACGTTCGGGCTGACCTCACTGGTCGCCTCGCCCTTCTACTGGCCCTATCCCCATGAAAATCGC AGCAACTTCTACGGCGGCCGGACACTCGAGTTCATGCAGTGGAGCGATGGCACCCGCCGCATGCGCGACCGCATAGAGTA TCGCTACGAAGGCGAAGGCTTTATCGGTGAAGAGAGCTTTGTCACCGTTTCGGTAGACGCGAGCAGGAAAGGCAAGATCG GCCAGGCACGCATCTATGACCGCAAGGGCGAGCCGCAGGAAGACTACCCCGGCGTCTTCAAGTTCTAG
Upstream 100 bases:
>100_bases GGTCTGCCACTCCAGCCATTGGGTCGTTTCAGGAAAACCTCGCGGGTTTTCCTGAACCTATGGAGAAATCGGATAGCCCA TCACTCACTGGAGCAGGGAC
Downstream 100 bases:
>100_bases GACCGGACGCGTGCCGGGGCGAACGCACCCGGCACGTCTCGGCGTTTCATTGCAGGTTCAAGGTAGTCGGCAACCCGGCC AGTTTCTGCGGGTTACGCAT
Product: phosphodiesterase/alkaline phosphatase D-like protein
Products: alcohol; phosphate
Alternate protein names: Phosphodiesterase/Alkaline Phosphatase D-Like; Phosphodiesterase I; Phosphodiesterase/Alkaline Phosphatase D-Like Protein; Alkaline Phosphatase Family Protein; Phosphodiesterase/Alkaline Phosphatase D
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MTITLGPIIGHTTDTSAKIWIRGEANDDKEAKRFCVGLIDVFKGKTWVTSCRCFLRDYYDFTGAVELSELKPATAYRVVC NTTYVSDELEVTRLVRDDKPVRPLNRAEESVEGTFTTDRAPADGTLNFVFGSCRYLYWDNVFQSDAEKGDKTFRSIVEKH SQKPFDLTLMIGDQVYLDPLNALRQYSTLEEMFDIYRQAFGLPWIRQMMNRIPTYMILDDHEIRDDWSREKLDDVGKGFY VSAMRGYESYQHLHNPATPKGQYWYTFQKGAFPFFVMDTRTQRIREPSSIEPRSVLGREQLNAFLTWLSEHRGAPMIFVV SSVPFFPDPKSGDDKWVGFPEERSIILEFIRVEKISNVVVLSGDVHNSCFAGMRCYQDPTFGLTSLVASPFYWPYPHENR SNFYGGRTLEFMQWSDGTRRMRDRIEYRYEGEGFIGEESFVTVSVDASRKGKIGQARIYDRKGEPQEDYPGVFKF
Sequences:
>Translated_475_residues MTITLGPIIGHTTDTSAKIWIRGEANDDKEAKRFCVGLIDVFKGKTWVTSCRCFLRDYYDFTGAVELSELKPATAYRVVC NTTYVSDELEVTRLVRDDKPVRPLNRAEESVEGTFTTDRAPADGTLNFVFGSCRYLYWDNVFQSDAEKGDKTFRSIVEKH SQKPFDLTLMIGDQVYLDPLNALRQYSTLEEMFDIYRQAFGLPWIRQMMNRIPTYMILDDHEIRDDWSREKLDDVGKGFY VSAMRGYESYQHLHNPATPKGQYWYTFQKGAFPFFVMDTRTQRIREPSSIEPRSVLGREQLNAFLTWLSEHRGAPMIFVV SSVPFFPDPKSGDDKWVGFPEERSIILEFIRVEKISNVVVLSGDVHNSCFAGMRCYQDPTFGLTSLVASPFYWPYPHENR SNFYGGRTLEFMQWSDGTRRMRDRIEYRYEGEGFIGEESFVTVSVDASRKGKIGQARIYDRKGEPQEDYPGVFKF >Mature_474_residues TITLGPIIGHTTDTSAKIWIRGEANDDKEAKRFCVGLIDVFKGKTWVTSCRCFLRDYYDFTGAVELSELKPATAYRVVCN TTYVSDELEVTRLVRDDKPVRPLNRAEESVEGTFTTDRAPADGTLNFVFGSCRYLYWDNVFQSDAEKGDKTFRSIVEKHS QKPFDLTLMIGDQVYLDPLNALRQYSTLEEMFDIYRQAFGLPWIRQMMNRIPTYMILDDHEIRDDWSREKLDDVGKGFYV SAMRGYESYQHLHNPATPKGQYWYTFQKGAFPFFVMDTRTQRIREPSSIEPRSVLGREQLNAFLTWLSEHRGAPMIFVVS SVPFFPDPKSGDDKWVGFPEERSIILEFIRVEKISNVVVLSGDVHNSCFAGMRCYQDPTFGLTSLVASPFYWPYPHENRS NFYGGRTLEFMQWSDGTRRMRDRIEYRYEGEGFIGEESFVTVSVDASRKGKIGQARIYDRKGEPQEDYPGVFKF
Specific function: Unknown
COG id: COG3540
COG function: function code P; Phosphodiesterase/alkaline phosphatase D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.1
Molecular weight: Translated: 55048; Mature: 54916
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITLGPIIGHTTDTSAKIWIRGEANDDKEAKRFCVGLIDVFKGKTWVTSCRCFLRDYYD CEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FTGAVELSELKPATAYRVVCNTTYVSDELEVTRLVRDDKPVRPLNRAEESVEGTFTTDRA CCCCEEHHHCCCCCEEEEEEECEEECCHHHHHHHHCCCCCCCCHHHHHHHCCCCEECCCC PADGTLNFVFGSCRYLYWDNVFQSDAEKGDKTFRSIVEKHSQKPFDLTLMIGDQVYLDPL CCCCEEEEEEECEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECHH NALRQYSTLEEMFDIYRQAFGLPWIRQMMNRIPTYMILDDHEIRDDWSREKLDDVGKGFY HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCHHCCCHHHHHHHHHCCCEE VSAMRGYESYQHLHNPATPKGQYWYTFQKGAFPFFVMDTRTQRIREPSSIEPRSVLGREQ EEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHH LNAFLTWLSEHRGAPMIFVVSSVPFFPDPKSGDDKWVGFPEERSIILEFIRVEKISNVVV HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEE LSGDVHNSCFAGMRCYQDPTFGLTSLVASPFYWPYPHENRSNFYGGRTLEFMQWSDGTRR EECCCCCHHHHCCHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH MRDRIEYRYEGEGFIGEESFVTVSVDASRKGKIGQARIYDRKGEPQEDYPGVFKF HHHHHCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure TITLGPIIGHTTDTSAKIWIRGEANDDKEAKRFCVGLIDVFKGKTWVTSCRCFLRDYYD EEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FTGAVELSELKPATAYRVVCNTTYVSDELEVTRLVRDDKPVRPLNRAEESVEGTFTTDRA CCCCEEHHHCCCCCEEEEEEECEEECCHHHHHHHHCCCCCCCCHHHHHHHCCCCEECCCC PADGTLNFVFGSCRYLYWDNVFQSDAEKGDKTFRSIVEKHSQKPFDLTLMIGDQVYLDPL CCCCEEEEEEECEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECHH NALRQYSTLEEMFDIYRQAFGLPWIRQMMNRIPTYMILDDHEIRDDWSREKLDDVGKGFY HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCHHCCCHHHHHHHHHCCCEE VSAMRGYESYQHLHNPATPKGQYWYTFQKGAFPFFVMDTRTQRIREPSSIEPRSVLGREQ EEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHH LNAFLTWLSEHRGAPMIFVVSSVPFFPDPKSGDDKWVGFPEERSIILEFIRVEKISNVVV HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEE LSGDVHNSCFAGMRCYQDPTFGLTSLVASPFYWPYPHENRSNFYGGRTLEFMQWSDGTRR EECCCCCHHHHCCHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHH MRDRIEYRYEGEGFIGEESFVTVSVDASRKGKIGQARIYDRKGEPQEDYPGVFKF HHHHHCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphate monoester; H2O
Specific reaction: A phosphate monoester + H2O = an alcohol + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA