| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459640
Identifier: 77459640
GI number: 77459640
Start: 3898956
End: 3900023
Strand: Direct
Name: 77459640
Synonym: Pfl01_3418
Alternate gene names: NA
Gene position: 3898956-3900023 (Clockwise)
Preceding gene: 77459638
Following gene: 77459641
Centisome position: 60.56
GC content: 61.24
Gene sequence:
>1068_bases ATGGCGCTTACTGACCAGTCCACCCGTATCCGCTCTGGCGAAGAACTCGATGCCAGCCTGATCGATCCGTACCTCAAGGC GCACATTCCGGGCCTGACCGGCACGCCGCAGATCAGCCAGTTTCCCGGCGGCGCGTCGAACCTGACCTACCTGCTGGAAT ACCCGGACCAGGAATTTGTCCTGCGCCGTCCGCCGTTCGGCCACAAGGCCAAGTCCGCCCACGACATGGGCCGCGAATTC CGCATCCTCAACCAGTTGCGCGACGGTTTCCCGTATTGCCCGAAAGCCTACGTGCACTGCACCGATGAATCAGTGATCGG TGCCGAGTTCTATGTGATGGAACGGGTCAGGGGCATCATCCTGCGCTCGGACCTGCCGCCGGAACTGGGCCTCGACCAGG CCAAAACCGAAGCCCTGTGCAAGAGCTTCATCGACCGTTTCGTCGAGCTGCATCGGGTCGACTACAAAGCCTGCGGCCTC GGCGATCTGGGCAAACCGGAAGGCTACGTCGCCCGCCAGATCAAAGGCTGGAGCGAACGCTACGAAAAAGCCCTGACCCC GGACGCGCCGCACTGGGAACAGGTCAAAGCCTGGCTCAACGACAAGATGCCGGCCGACCACCCGACCTCCAGCATCGTCC ACAACGACTATCGCTTCGACAACGTCATCCTCGACCCGAGCAACCCGATGCAGATCATCGGCGTGCTCGACTGGGAACTG ACTACCCTTGGCGATCCATTGATGGACCTGGGCAACACCCTCGCCTACTGGATCCAGGCCGACGACCCGGCCCCGGTGCA ACTGATGCGCCGCCAGCCAAGCCACGCCCCGGGCATGCTGACGCGCCGCGAATTCGTCGATTACTACGCCGAGCGTTCGG GCATCCAGATCGACAATTTCGACTTCTACTACACCTACGGCCTGTTCCGCCTGGCCGGCATCGTGCAGCAGATTTACTAC CGCTTCTTCCATGGCCAGACCCAGGACAAACGCTTCGCGCAGTTCATTCACATGAACAAACTGCTGGAGCAGATGAGCCT GCAGGTCATTGCCAAATCCAGCCTCTGA
Upstream 100 bases:
>100_bases CACGCTAACCTATAAGACCGAACCGCGCTTGTGACCGCCCGAGCGCGCCATTAGATTAGCCAATGATGTCTGGCCTCCAA AATAAGCAGAAGGGATAAGC
Downstream 100 bases:
>100_bases TGACGGCGTTATAACAAGGCTTACTACAAGGGAATCCCATGTCCAAGACTCAGTTGTTCGACCTCGACGGCAAGATCGCT TTCGTCTCCGGCGCCAGCCG
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-Coa Dehydrogenase Fade; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MALTDQSTRIRSGEELDASLIDPYLKAHIPGLTGTPQISQFPGGASNLTYLLEYPDQEFVLRRPPFGHKAKSAHDMGREF RILNQLRDGFPYCPKAYVHCTDESVIGAEFYVMERVRGIILRSDLPPELGLDQAKTEALCKSFIDRFVELHRVDYKACGL GDLGKPEGYVARQIKGWSERYEKALTPDAPHWEQVKAWLNDKMPADHPTSSIVHNDYRFDNVILDPSNPMQIIGVLDWEL TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSHAPGMLTRREFVDYYAERSGIQIDNFDFYYTYGLFRLAGIVQQIYY RFFHGQTQDKRFAQFIHMNKLLEQMSLQVIAKSSL
Sequences:
>Translated_355_residues MALTDQSTRIRSGEELDASLIDPYLKAHIPGLTGTPQISQFPGGASNLTYLLEYPDQEFVLRRPPFGHKAKSAHDMGREF RILNQLRDGFPYCPKAYVHCTDESVIGAEFYVMERVRGIILRSDLPPELGLDQAKTEALCKSFIDRFVELHRVDYKACGL GDLGKPEGYVARQIKGWSERYEKALTPDAPHWEQVKAWLNDKMPADHPTSSIVHNDYRFDNVILDPSNPMQIIGVLDWEL TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSHAPGMLTRREFVDYYAERSGIQIDNFDFYYTYGLFRLAGIVQQIYY RFFHGQTQDKRFAQFIHMNKLLEQMSLQVIAKSSL >Mature_354_residues ALTDQSTRIRSGEELDASLIDPYLKAHIPGLTGTPQISQFPGGASNLTYLLEYPDQEFVLRRPPFGHKAKSAHDMGREFR ILNQLRDGFPYCPKAYVHCTDESVIGAEFYVMERVRGIILRSDLPPELGLDQAKTEALCKSFIDRFVELHRVDYKACGLG DLGKPEGYVARQIKGWSERYEKALTPDAPHWEQVKAWLNDKMPADHPTSSIVHNDYRFDNVILDPSNPMQIIGVLDWELT TLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSHAPGMLTRREFVDYYAERSGIQIDNFDFYYTYGLFRLAGIVQQIYYR FFHGQTQDKRFAQFIHMNKLLEQMSLQVIAKSSL
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI38505218, Length=347, Percent_Identity=32.2766570605187, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI48976061, Length=322, Percent_Identity=32.2981366459627, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI211971008, Length=322, Percent_Identity=32.2981366459627, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17562446, Length=327, Percent_Identity=31.4984709480122, Blast_Score=154, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40716; Mature: 40585
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTDQSTRIRSGEELDASLIDPYLKAHIPGLTGTPQISQFPGGASNLTYLLEYPDQEFV CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE LRRPPFGHKAKSAHDMGREFRILNQLRDGFPYCPKAYVHCTDESVIGAEFYVMERVRGII EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHE LRSDLPPELGLDQAKTEALCKSFIDRFVELHRVDYKACGLGDLGKPEGYVARQIKGWSER ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHH YEKALTPDAPHWEQVKAWLNDKMPADHPTSSIVHNDYRFDNVILDPSNPMQIIGVLDWEL HHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEEEEEEECEEH TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSHAPGMLTRREFVDYYAERSGIQIDNF HHCCCHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCC DFYYTYGLFRLAGIVQQIYYRFFHGQTQDKRFAQFIHMNKLLEQMSLQVIAKSSL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALTDQSTRIRSGEELDASLIDPYLKAHIPGLTGTPQISQFPGGASNLTYLLEYPDQEFV CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEE LRRPPFGHKAKSAHDMGREFRILNQLRDGFPYCPKAYVHCTDESVIGAEFYVMERVRGII EECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHE LRSDLPPELGLDQAKTEALCKSFIDRFVELHRVDYKACGLGDLGKPEGYVARQIKGWSER ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHH YEKALTPDAPHWEQVKAWLNDKMPADHPTSSIVHNDYRFDNVILDPSNPMQIIGVLDWEL HHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCEEEEEEECEEH TTLGDPLMDLGNTLAYWIQADDPAPVQLMRRQPSHAPGMLTRREFVDYYAERSGIQIDNF HHCCCHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEECCC DFYYTYGLFRLAGIVQQIYYRFFHGQTQDKRFAQFIHMNKLLEQMSLQVIAKSSL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA