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The map label for this gene is hcp1 [H]

Identifier: 77459630

GI number: 77459630

Start: 3887825

End: 3888322

Strand: Direct

Name: hcp1 [H]

Synonym: Pfl01_3408

Alternate gene names: 77459630

Gene position: 3887825-3888322 (Clockwise)

Preceding gene: 77459629

Following gene: 77459631

Centisome position: 60.38

GC content: 58.84

Gene sequence:

>498_bases
ATGGATGCAATCATTCTCGACCTCGGCGGCGACATCAAAGGCGACAGCCTGCTCGAGGGTTACGCGGACAAGATCGAAGT
CATGTCCTACAGCCACAACGTGGCGATGCAAGTCACCAACGACGTCAGCAACTCGGAGCGCACCTCCGGCAAACCCCACG
TCGGCGAGTTCACCCTGACCAAATTCGTCGACACCTCCACACCGTCGCTCAACGAATACTGCTGTGCCGGCAAGCCGATC
CCGGAAGCCAAGATCACCATCGGCCGCAACGCCGCTGAAGGCAGCGGGCAACTGCTGCCCTTCATTATTTACACCCTGAC
CAACGTGGTGATTTCCAACGTCAGCGTCAGTGGCGGTACCGGCGGCAAACCGGTGGAAACCCTGTCCCTGAACTTCACCA
AGATCAAATGGGAACTCACCGCGCAGAAAGACGACGGCACCAAGGAAGGCACGGCTGCCTCGACTTGGGACATGGCCGCC
AACAAGCTCGTCAGCTAA

Upstream 100 bases:

>100_bases
CTGCCGCCACCGGTAGCCGCCTGACCCGCCTGCGCCCGCAGGATTTCCTGCGGGCGCTCCCCTGTTTGCCTGGCACGACA
CCTTTCAGGAGTTTCAAGCG

Downstream 100 bases:

>100_bases
CCCGGCGGCGCGGCCATGGCAGGCACCGGCTTACTTCCACCGCTGTTCGAACGCCTCGCCTCGAGCGAGGGCGACGGCGC
GCGGGAGTTCGATCGGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MDAIILDLGGDIKGDSLLEGYADKIEVMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLTKFVDTSTPSLNEYCCAGKPI
PEAKITIGRNAAEGSGQLLPFIIYTLTNVVISNVSVSGGTGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDMAA
NKLVS

Sequences:

>Translated_165_residues
MDAIILDLGGDIKGDSLLEGYADKIEVMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLTKFVDTSTPSLNEYCCAGKPI
PEAKITIGRNAAEGSGQLLPFIIYTLTNVVISNVSVSGGTGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDMAA
NKLVS
>Mature_165_residues
MDAIILDLGGDIKGDSLLEGYADKIEVMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLTKFVDTSTPSLNEYCCAGKPI
PEAKITIGRNAAEGSGQLLPFIIYTLTNVVISNVSVSGGTGGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDMAA
NKLVS

Specific function: Required for assembly of the protein secretion apparatus HSI-I. Actively secreted during chronic infection of cystic fibrosis patients [H]

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 17519; Mature: 17519

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAIILDLGGDIKGDSLLEGYADKIEVMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLT
CCEEEEECCCCCCCCHHHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEE
KFVDTSTPSLNEYCCAGKPIPEAKITIGRNAAEGSGQLLPFIIYTLTNVVISNVSVSGGT
EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCC
GGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDMAANKLVS
CCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDAIILDLGGDIKGDSLLEGYADKIEVMSYSHNVAMQVTNDVSNSERTSGKPHVGEFTLT
CCEEEEECCCCCCCCHHHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEE
KFVDTSTPSLNEYCCAGKPIPEAKITIGRNAAEGSGQLLPFIIYTLTNVVISNVSVSGGT
EEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEECCCC
GGKPVETLSLNFTKIKWELTAQKDDGTKEGTAASTWDMAANKLVS
CCCCEEEEEEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]