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The map label for this gene is ykwD [H]

Identifier: 77459606

GI number: 77459606

Start: 3858287

End: 3859171

Strand: Direct

Name: ykwD [H]

Synonym: Pfl01_3384

Alternate gene names: 77459606

Gene position: 3858287-3859171 (Clockwise)

Preceding gene: 77459604

Following gene: 77459610

Centisome position: 59.93

GC content: 64.97

Gene sequence:

>885_bases
ATGATGTGCGCACTCAGCCCAAGGGAGATTTCCATGCGCTTCATGCCATCCGTTCTGCGACTCGCCGCGTTGTCCGTGGG
CCTGGCGCTGGCCACTTCGGCCATGGCCACCGATGAGTCGCAATTGATCGAATCGATCAACAGCTACCGCAGCCAGCCGC
AGCGTTGTGGCAGCCAGGCGTCCAGCGAATTGCCGCCGCTGTCGGCCGATCCGCGCCTGATTCTGCCGGCCAGCGGCGTG
GTGGATTTGCAGCAGGCGATGTCCAGCGCTCGCTACCCGATGGTCAACGTGCAGGCGATCACCCTGAACGGGCCACGGGA
TGCGGCGTCGGCGATGAAGGCGATTCAGGAAAGCTTCTGTCAGGTGGTGCTGGATCCGCAGTTCGTCGATATCGGCGTCA
GCCGCGCTGATCGTGACTGGCGCATCACCCTCGCCCGGCCACTGCTGTCCGCCCGCCTCGGCGACGGTCAGGCTGAAGGA
CAGAAACTCCTCGAACAACTCAACGCCGCCCGCACCCAGCCGCGCCAGTGCGGCGGTCAGGCATTCGCAGCGACTGCGCC
GCTGGCGTGGAACGCGGTGCTCGGCGGCGTTGCCCAGGAGCACAGCCGCGAGATGGCCAACAACAATTATTTCGACCATA
AGGACCGCAACGGCGGCACTCCCGGCGACCGCGCGGAACTGGCCGGTTATAGCGGTCAGCAGGTCGGCGAGAACATCGCC
GCCGGGCAGGACACGGTGCAGAAAGTCGTTGCCGGCTGGCTCGCCAGCCCCGGTCATTGCGCCAACCTGATGAACCCGCA
GTACCGCGAACTCGGCGCTGCTTACGCAGTCGATCCGAAGAGCAGTGCCGGGATTTACTGGACTGCGATGTTTGGCGGCG
AGTAA

Upstream 100 bases:

>100_bases
GTCTTCGCAGAGTGTAGACGGCAAATTGCACGGAATCGTTCGGCAGAAAAATCCGCGTTGTGAAGAAAAAGACATTGCAC
GAACCGGGGCCCTTTCGCGC

Downstream 100 bases:

>100_bases
GTCTTAAGACCACCACTGAGCAATGTGGGAGCTGGCTTGCCAGCGATGGGGCCAGCACAGTCAAACCATCATCGACTGAT
CCGCCGCCATCGCTGGCAAG

Product: Allergen V5/Tpx-1-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MMCALSPREISMRFMPSVLRLAALSVGLALATSAMATDESQLIESINSYRSQPQRCGSQASSELPPLSADPRLILPASGV
VDLQQAMSSARYPMVNVQAITLNGPRDAASAMKAIQESFCQVVLDPQFVDIGVSRADRDWRITLARPLLSARLGDGQAEG
QKLLEQLNAARTQPRQCGGQAFAATAPLAWNAVLGGVAQEHSREMANNNYFDHKDRNGGTPGDRAELAGYSGQQVGENIA
AGQDTVQKVVAGWLASPGHCANLMNPQYRELGAAYAVDPKSSAGIYWTAMFGGE

Sequences:

>Translated_294_residues
MMCALSPREISMRFMPSVLRLAALSVGLALATSAMATDESQLIESINSYRSQPQRCGSQASSELPPLSADPRLILPASGV
VDLQQAMSSARYPMVNVQAITLNGPRDAASAMKAIQESFCQVVLDPQFVDIGVSRADRDWRITLARPLLSARLGDGQAEG
QKLLEQLNAARTQPRQCGGQAFAATAPLAWNAVLGGVAQEHSREMANNNYFDHKDRNGGTPGDRAELAGYSGQQVGENIA
AGQDTVQKVVAGWLASPGHCANLMNPQYRELGAAYAVDPKSSAGIYWTAMFGGE
>Mature_294_residues
MMCALSPREISMRFMPSVLRLAALSVGLALATSAMATDESQLIESINSYRSQPQRCGSQASSELPPLSADPRLILPASGV
VDLQQAMSSARYPMVNVQAITLNGPRDAASAMKAIQESFCQVVLDPQFVDIGVSRADRDWRITLARPLLSARLGDGQAEG
QKLLEQLNAARTQPRQCGGQAFAATAPLAWNAVLGGVAQEHSREMANNNYFDHKDRNGGTPGDRAELAGYSGQQVGENIA
AGQDTVQKVVAGWLASPGHCANLMNPQYRELGAAYAVDPKSSAGIYWTAMFGGE

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 31338; Mature: 31338

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMCALSPREISMRFMPSVLRLAALSVGLALATSAMATDESQLIESINSYRSQPQRCGSQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH
SSELPPLSADPRLILPASGVVDLQQAMSSARYPMVNVQAITLNGPRDAASAMKAIQESFC
HCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH
QVVLDPQFVDIGVSRADRDWRITLARPLLSARLGDGQAEGQKLLEQLNAARTQPRQCGGQ
HHHCCCCEEECCCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCC
AFAATAPLAWNAVLGGVAQEHSREMANNNYFDHKDRNGGTPGDRAELAGYSGQQVGENIA
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
AGQDTVQKVVAGWLASPGHCANLMNPQYRELGAAYAVDPKSSAGIYWTAMFGGE
CCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCEEEECCCCCCCEEEEEEECCC
>Mature Secondary Structure
MMCALSPREISMRFMPSVLRLAALSVGLALATSAMATDESQLIESINSYRSQPQRCGSQA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH
SSELPPLSADPRLILPASGVVDLQQAMSSARYPMVNVQAITLNGPRDAASAMKAIQESFC
HCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHH
QVVLDPQFVDIGVSRADRDWRITLARPLLSARLGDGQAEGQKLLEQLNAARTQPRQCGGQ
HHHCCCCEEECCCCCCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCC
AFAATAPLAWNAVLGGVAQEHSREMANNNYFDHKDRNGGTPGDRAELAGYSGQQVGENIA
EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHH
AGQDTVQKVVAGWLASPGHCANLMNPQYRELGAAYAVDPKSSAGIYWTAMFGGE
CCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCEEEECCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]