Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459597

Identifier: 77459597

GI number: 77459597

Start: 3849669

End: 3850184

Strand: Direct

Name: 77459597

Synonym: Pfl01_3375

Alternate gene names: NA

Gene position: 3849669-3850184 (Clockwise)

Preceding gene: 77459596

Following gene: 77459599

Centisome position: 59.79

GC content: 62.4

Gene sequence:

>516_bases
ATGACCACAGCTCTCTCGTCGGCCGTCAAAGGCCTGCACTGGAACCTCGACCGCGCCGGCCAGTGGCTCGCGCCGCTGAC
CTTGCGCCTGTTCATCGCCTGGGAATTTTTCGAATCGGGGCTGGAGAAATTCAACGGCCAGAACTGGTTCGAAGACATTC
AGGAGCGGTTCCCGTTCCCCTTCGACCACTTGCCCGCCACGCTGAACTGGGAGCTTTCGATGTGGGCCGAGCTGATCTGC
GCACTGGCGATCCTGATCGGATTCGGCACGCGGATTTCGGCGATTTCGCTGATTGTCGTGACCGTCGTCGCCACCGCTGC
CGTGCACTGGCCGGCAGACTGGTCTTCGCTGAGCGAACTGGCCCAGGGCTACGCGATCACCAACAAGGGCTTCGGCAACT
TCAAGCTGCCGGCGATCTACCTCGCCGCACTGGTGCCGCTGGTATTCGCCGGTGCCGGCAAGTTGAGTGTGGATGCGTGG
CTGGAGCGGTTTTTCTGGAAACGCGCCAGCCGCTGA

Upstream 100 bases:

>100_bases
GAAGGCAAATGCGGCGAAGGCAAGTGCGGCGCCGGCGAATAAGCCTTTTCACGGGGTACGCCAGTGCCCCGTTTTCCCCT
TGAATGAATGGAGCCTTCCC

Downstream 100 bases:

>100_bases
GGATCAATGCGCCCGGTCCAGCCCCGCCAGCAACGCACTGTCCCGGCTGTAGATGTCCGGCGCGTAAAGCACGCGGCCCT
GGCCGTCAACCTGGGCCGTC

Product: DoxX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFPFDHLPATLNWELSMWAELIC
ALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSELAQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAW
LERFFWKRASR

Sequences:

>Translated_171_residues
MTTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFPFDHLPATLNWELSMWAELIC
ALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSELAQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAW
LERFFWKRASR
>Mature_170_residues
TTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFPFDHLPATLNWELSMWAELICA
LAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSELAQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAWL
ERFFWKRASR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 19176; Mature: 19045

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFP
CCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
FDHLPATLNWELSMWAELICALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSEL
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAWLERFFWKRASR
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTALSSAVKGLHWNLDRAGQWLAPLTLRLFIAWEFFESGLEKFNGQNWFEDIQERFPFP
CCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
FDHLPATLNWELSMWAELICALAILIGFGTRISAISLIVVTVVATAAVHWPADWSSLSEL
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AQGYAITNKGFGNFKLPAIYLAALVPLVFAGAGKLSVDAWLERFFWKRASR
HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]