Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459578

Identifier: 77459578

GI number: 77459578

Start: 3830182

End: 3831444

Strand: Reverse

Name: 77459578

Synonym: Pfl01_3356

Alternate gene names: NA

Gene position: 3831444-3830182 (Counterclockwise)

Preceding gene: 77459579

Following gene: 77459570

Centisome position: 59.51

GC content: 63.34

Gene sequence:

>1263_bases
GTGGCCACTCACCTCGATCGCCGTAATAACCTGTCTCTCGACAGCCTGAATTTTTTCCTCGCCGACGTGCGTGACGGCCT
GGGGCCCTATTTGGCGATTTACCTGCTGGCGGTTCACCACTGGGAGCCGGCGAGCATCGGTCTGGTGATGACCATAGCCG
GGATCGCCGCACTGATCACGCAGACCCCGGCAGGTGCGCTGGTCGACAGCACGCGCTTCAAACGGTCGCTCATTGCGGTT
GCCGCGCTGGTGGTCACCGCAAGCTGTCTGCTGCTGCCGTTTGTGACGTCGTTCAGTCTGGTGGCCCTGACGCAGGCGAT
CAGTGCCGCTGCCGCTTCGATCTTCGCGCCCGCCATTTGCGCGATCACCCTGGGTATCACCGGGCCGCGAGCCTTCACGC
GAAGGACCGGGCGCAACGAAACCTTCAACCATGCCGGCAACGCCTGCGCCGCGTTGTTGGCCGGTTTGTCCGCGTACCTG
TTTGGTCCGGTTGCGGTGTTTTATTTGATGGCGGTCATGGCGCTGGCCAGTGTGATTGCCGTTTCGTTCGTATCGGCCGA
CGCCATTGATCACGATCTCGCCCGGGGTCTGGAGCCCAGCGCAACGGGGCAGGGCAAGCAGCCTTCGGGCTTTTCCGTGT
TGCTCACCAACAGGCCGCTGCTGATGTTCGCGATTTGTTGTGCGCTGTTTCATCTGGCGAACGCGGCGATGTTGCCGCTG
GTGAGTCAGAAACTGGCGCAGGCCAATCTGCAGATGGCCACGCCACTCACGTCCGCCTGCATCGTCGCGGCACAACTGGT
GATGGTGCCGGTCGCGCTGCTGGTGGGGGCGAAGGCCGATCTGTGGGGGCGCAAGCCGTTGCTGCTGGCGGGGTTTATGA
TCCTGCCATTGCGCGGTGTGCTGTATGTGCTGTCGAACGATCCGTGGTGGCTGGTTTCGGTGCAGTTGCTCGATGGCATC
GGCGCGGGGATTTTCGGCGCGCTGTTTCCGGTGGTGGTGAAAGACCTGACGCTGGGCACCGGACATTTCAATGTCAGTCT
CGGGGCGATTTCAACGGTGTTCGGTCTGGGCGCGGCATTGAGCAACAGCCTGGCGGGGATTGTGGTTCAGGAGGCCGGTT
ACAGCGCTGCGTTCCTGACCCTGGCGGCGGTGGCAATGGCGGCGCTGGTGCTGCTCTGGTTGGCAGTGCCGGAGACGGTG
CAGCGCTCCGATACCGACTCGATCGCCCTGCAAGGCAAGGCGCCGCCGATGGTTGCGCCATGA

Upstream 100 bases:

>100_bases
AAAGACGGCTGTTTCATGCAACTAAAACGCTTGGCAAAAGGTCATTCGATTTGCGGAGGTTGAGTCATCTCGCAGAACCT
CGACAACGAAGACGTTACCC

Downstream 100 bases:

>100_bases
CTCAACGCTCGCAAGACCTGTTCAACCGGCGGGAATCGACAACGTCGCCCGCAGGCCGCCCTCGACCCGGTTTTCCAGTG
TGATCCGCCCACCCAGACGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MATHLDRRNNLSLDSLNFFLADVRDGLGPYLAIYLLAVHHWEPASIGLVMTIAGIAALITQTPAGALVDSTRFKRSLIAV
AALVVTASCLLLPFVTSFSLVALTQAISAAAASIFAPAICAITLGITGPRAFTRRTGRNETFNHAGNACAALLAGLSAYL
FGPVAVFYLMAVMALASVIAVSFVSADAIDHDLARGLEPSATGQGKQPSGFSVLLTNRPLLMFAICCALFHLANAAMLPL
VSQKLAQANLQMATPLTSACIVAAQLVMVPVALLVGAKADLWGRKPLLLAGFMILPLRGVLYVLSNDPWWLVSVQLLDGI
GAGIFGALFPVVVKDLTLGTGHFNVSLGAISTVFGLGAALSNSLAGIVVQEAGYSAAFLTLAAVAMAALVLLWLAVPETV
QRSDTDSIALQGKAPPMVAP

Sequences:

>Translated_420_residues
MATHLDRRNNLSLDSLNFFLADVRDGLGPYLAIYLLAVHHWEPASIGLVMTIAGIAALITQTPAGALVDSTRFKRSLIAV
AALVVTASCLLLPFVTSFSLVALTQAISAAAASIFAPAICAITLGITGPRAFTRRTGRNETFNHAGNACAALLAGLSAYL
FGPVAVFYLMAVMALASVIAVSFVSADAIDHDLARGLEPSATGQGKQPSGFSVLLTNRPLLMFAICCALFHLANAAMLPL
VSQKLAQANLQMATPLTSACIVAAQLVMVPVALLVGAKADLWGRKPLLLAGFMILPLRGVLYVLSNDPWWLVSVQLLDGI
GAGIFGALFPVVVKDLTLGTGHFNVSLGAISTVFGLGAALSNSLAGIVVQEAGYSAAFLTLAAVAMAALVLLWLAVPETV
QRSDTDSIALQGKAPPMVAP
>Mature_419_residues
ATHLDRRNNLSLDSLNFFLADVRDGLGPYLAIYLLAVHHWEPASIGLVMTIAGIAALITQTPAGALVDSTRFKRSLIAVA
ALVVTASCLLLPFVTSFSLVALTQAISAAAASIFAPAICAITLGITGPRAFTRRTGRNETFNHAGNACAALLAGLSAYLF
GPVAVFYLMAVMALASVIAVSFVSADAIDHDLARGLEPSATGQGKQPSGFSVLLTNRPLLMFAICCALFHLANAAMLPLV
SQKLAQANLQMATPLTSACIVAAQLVMVPVALLVGAKADLWGRKPLLLAGFMILPLRGVLYVLSNDPWWLVSVQLLDGIG
AGIFGALFPVVVKDLTLGTGHFNVSLGAISTVFGLGAALSNSLAGIVVQEAGYSAAFLTLAAVAMAALVLLWLAVPETVQ
RSDTDSIALQGKAPPMVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43556; Mature: 43425

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATHLDRRNNLSLDSLNFFLADVRDGLGPYLAIYLLAVHHWEPASIGLVMTIAGIAALIT
CCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QTPAGALVDSTRFKRSLIAVAALVVTASCLLLPFVTSFSLVALTQAISAAAASIFAPAIC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITLGITGPRAFTRRTGRNETFNHAGNACAALLAGLSAYLFGPVAVFYLMAVMALASVIA
HHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFVSADAIDHDLARGLEPSATGQGKQPSGFSVLLTNRPLLMFAICCALFHLANAAMLPL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
VSQKLAQANLQMATPLTSACIVAAQLVMVPVALLVGAKADLWGRKPLLLAGFMILPLRGV
HHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LYVLSNDPWWLVSVQLLDGIGAGIFGALFPVVVKDLTLGTGHFNVSLGAISTVFGLGAAL
EEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
SNSLAGIVVQEAGYSAAFLTLAAVAMAALVLLWLAVPETVQRSDTDSIALQGKAPPMVAP
HCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
ATHLDRRNNLSLDSLNFFLADVRDGLGPYLAIYLLAVHHWEPASIGLVMTIAGIAALIT
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QTPAGALVDSTRFKRSLIAVAALVVTASCLLLPFVTSFSLVALTQAISAAAASIFAPAIC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITLGITGPRAFTRRTGRNETFNHAGNACAALLAGLSAYLFGPVAVFYLMAVMALASVIA
HHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFVSADAIDHDLARGLEPSATGQGKQPSGFSVLLTNRPLLMFAICCALFHLANAAMLPL
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHH
VSQKLAQANLQMATPLTSACIVAAQLVMVPVALLVGAKADLWGRKPLLLAGFMILPLRGV
HHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
LYVLSNDPWWLVSVQLLDGIGAGIFGALFPVVVKDLTLGTGHFNVSLGAISTVFGLGAAL
EEEECCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHH
SNSLAGIVVQEAGYSAAFLTLAAVAMAALVLLWLAVPETVQRSDTDSIALQGKAPPMVAP
HCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]