Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is fct [H]

Identifier: 77459540

GI number: 77459540

Start: 3797732

End: 3799864

Strand: Direct

Name: fct [H]

Synonym: Pfl01_3318

Alternate gene names: 77459540

Gene position: 3797732-3799864 (Clockwise)

Preceding gene: 77459539

Following gene: 77459545

Centisome position: 58.99

GC content: 61.23

Gene sequence:

>2133_bases
ATGAAACAACTTACCTTGCTGGCGAGCCTGTGCGGCTGCCTGTCCGTCAACGTCTGGGCGCAATCCACCGTGGATCTGGC
GCCGATCACCATTGACGGCGAGTCCGGTGCCGAGCCTGGCCTGAGCCTCGACCAGTCCAGCGGCATGGCCTCGCGCCTCG
GCCTCAGCGTGCGCGACACTCCGGCTTCGGTGGCCATTGCCAACCGCAGTGACATCGAACGTCGCGGTTCGCAAAGCTTT
CAGGACGCGGCCAACACCTTGCCGGGCGTGAACGCCAGTGCCCCGCCTGGCTTTGGCGGGTTCGTCTCCTATCGCGGTTT
CACCAGCAGCCAGATCACCCAGATGTTCAACGGCGTCAACGTTTCCGGCGGGCTGGCGCGGCCAGTGGATTCATGGATTT
ATGACCGGGTGGAACTGGTCGGCGGCCCGTCATCGTTGATCAACGGCGCGGGCTCGGTCGGTGGCTCGCTGAACTACGTG
ACCAAACTGGCCACCCGCGACGAGCAAGCCATCGAAGGCCGGGTCAGCTATGGCACCTACGACACCACCGAAACCGCGTT
CGGCCTCAATCACGCGCTGACCGAACCCGGCGTCGACGCGCAGCATTACGCGCGCCTCGACGTCAGCCACAACACCAGCA
ACGGCTACATCGACCGGCAGGAACGCGATGCCTGGAGCGTGGCGTTCTCGCTGCTCAGCGATCTGACGCCGAACCTGTCG
CACACCCTGGCCCTGGAATATCAGGACGAACACGAAGACAGCCCGTACTGGGGCACGCCGGTGCTCAACCCCAAGGCCGG
CGAGTTGAAGATCGACAAGCACAACCGCTTCAACAACTACAACGTCGAGGACGGCCGGTACGAGCAGCGGACGATCTGGG
TGCGCTCGATCATCGATTACCGGATCAACGACAGCACCACCCTGCGCAACACCCTCTATCACCTCGACAGCCAGCGTGAT
TACCGCAACCTGGAAACCTATCAATACAACGCCGACAACAGCGCGGTGAACCGCTCCACTGCGTATCAGGTGCGACATCA
GGGCGAGCAGAACGGCAACCAATTCGAACTGCGCCACGACAACACCCTGTTCGGCCTCGACACCACCTGGTCCGGCGGAT
TCGAGTACAAGGTCAACCAGACCACCAACTCGCCGCTGAACGTCAAAGGCGCCAGCGCGGTGAACCCGAACAACTACCGA
CCGGGGCATTTCTATGACATCCCCGGAACGATGCCGGGTTTTGTCAGCGACAAGACCAACGAAGTCACCACCAAAGCGCT
GTTTGCCGAGAATCGCCTGGCACTGACCGACAAGCTTTCGCTGCTCACTGGTCTGCGCTATGACGACATCGACCTCGACG
TGACCAACCATCGCACGGTAACGGCAAGCAACCCGCATCATCTGAAGCGCAGCTGGGATCCGGTCACCGGGCGCATCGGC
CTGACCTATCAGTTCATTCCGTCAGCCAATGTATACGTGCAATACAGCACTGCCGCCGAGCAACCCAATGGCACCCAGGA
CTTTGATGTCTCGACCGGCAAGCAATGGGAAATCGGCAGCAAGTTCGACTACCTGAACGGACGCGGTTCGGCAACGGTGG
CCGCCTACACCATCGAGCGCAAGGACTTCGCGGTGACGGATCCACTGGACCCGACCAGCAGCATTCCGGTCGGCCAGCAG
ACGTCGAAGGGTATCGAGATTGCCAGCTCGTTGCGGATCACCGACAAGTTGCTGGCCGAAGGCAACTTCGCCTGGGTCGA
TGCGCAATACGATGAGTTCAACGAAAAGAACCCCGCCGGCGTGGTGGTTTCGCGCAAGGGCAACACACCGACCAACGTGC
CGGACCGGGTCGGCAATCTGTGGCTGACCTACGATTTCTCGCCAAAATGGCAAGGCGGGGTCGATGCGCGGTACGTGGCG
TCGGTGTTCGCCGATAATGCCAACACCATGACCGTGCCGTCGTACACGCTGTTTGGCAGCTTTCTCAGCTACAAGGTGGA
TTCGCACACCACTGTGACCGGACGGGTGCGCAACCTGACGAATGAGGTGTATGCCGAGTTCGCCCATGTGTCGCCGGCGT
ATTACCTCGGCACACCGCGTACATTCGAGCTGGCTGTACAGACGCGGTTCTGA

Upstream 100 bases:

>100_bases
GCCTGAGTGCCCTTGCCTTTTTGATCTGTCAGCCCACTGCGCCAACGCGCGGCGTTCGCCTGTGCGCTGACTCCGAGAAC
AAGCATTCAGGATTCAATCA

Downstream 100 bases:

>100_bases
TTCATCCTGGCGAGGGCGTCGCCCCTCGCCACTTCACTACAGACCTGCCTGAACCTTCTGCGCCACATCCTTCGGCAGCC
ACGCCTGCCACACATCCGGG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 710; Mature: 710

Protein sequence:

>710_residues
MKQLTLLASLCGCLSVNVWAQSTVDLAPITIDGESGAEPGLSLDQSSGMASRLGLSVRDTPASVAIANRSDIERRGSQSF
QDAANTLPGVNASAPPGFGGFVSYRGFTSSQITQMFNGVNVSGGLARPVDSWIYDRVELVGGPSSLINGAGSVGGSLNYV
TKLATRDEQAIEGRVSYGTYDTTETAFGLNHALTEPGVDAQHYARLDVSHNTSNGYIDRQERDAWSVAFSLLSDLTPNLS
HTLALEYQDEHEDSPYWGTPVLNPKAGELKIDKHNRFNNYNVEDGRYEQRTIWVRSIIDYRINDSTTLRNTLYHLDSQRD
YRNLETYQYNADNSAVNRSTAYQVRHQGEQNGNQFELRHDNTLFGLDTTWSGGFEYKVNQTTNSPLNVKGASAVNPNNYR
PGHFYDIPGTMPGFVSDKTNEVTTKALFAENRLALTDKLSLLTGLRYDDIDLDVTNHRTVTASNPHHLKRSWDPVTGRIG
LTYQFIPSANVYVQYSTAAEQPNGTQDFDVSTGKQWEIGSKFDYLNGRGSATVAAYTIERKDFAVTDPLDPTSSIPVGQQ
TSKGIEIASSLRITDKLLAEGNFAWVDAQYDEFNEKNPAGVVVSRKGNTPTNVPDRVGNLWLTYDFSPKWQGGVDARYVA
SVFADNANTMTVPSYTLFGSFLSYKVDSHTTVTGRVRNLTNEVYAEFAHVSPAYYLGTPRTFELAVQTRF

Sequences:

>Translated_710_residues
MKQLTLLASLCGCLSVNVWAQSTVDLAPITIDGESGAEPGLSLDQSSGMASRLGLSVRDTPASVAIANRSDIERRGSQSF
QDAANTLPGVNASAPPGFGGFVSYRGFTSSQITQMFNGVNVSGGLARPVDSWIYDRVELVGGPSSLINGAGSVGGSLNYV
TKLATRDEQAIEGRVSYGTYDTTETAFGLNHALTEPGVDAQHYARLDVSHNTSNGYIDRQERDAWSVAFSLLSDLTPNLS
HTLALEYQDEHEDSPYWGTPVLNPKAGELKIDKHNRFNNYNVEDGRYEQRTIWVRSIIDYRINDSTTLRNTLYHLDSQRD
YRNLETYQYNADNSAVNRSTAYQVRHQGEQNGNQFELRHDNTLFGLDTTWSGGFEYKVNQTTNSPLNVKGASAVNPNNYR
PGHFYDIPGTMPGFVSDKTNEVTTKALFAENRLALTDKLSLLTGLRYDDIDLDVTNHRTVTASNPHHLKRSWDPVTGRIG
LTYQFIPSANVYVQYSTAAEQPNGTQDFDVSTGKQWEIGSKFDYLNGRGSATVAAYTIERKDFAVTDPLDPTSSIPVGQQ
TSKGIEIASSLRITDKLLAEGNFAWVDAQYDEFNEKNPAGVVVSRKGNTPTNVPDRVGNLWLTYDFSPKWQGGVDARYVA
SVFADNANTMTVPSYTLFGSFLSYKVDSHTTVTGRVRNLTNEVYAEFAHVSPAYYLGTPRTFELAVQTRF
>Mature_710_residues
MKQLTLLASLCGCLSVNVWAQSTVDLAPITIDGESGAEPGLSLDQSSGMASRLGLSVRDTPASVAIANRSDIERRGSQSF
QDAANTLPGVNASAPPGFGGFVSYRGFTSSQITQMFNGVNVSGGLARPVDSWIYDRVELVGGPSSLINGAGSVGGSLNYV
TKLATRDEQAIEGRVSYGTYDTTETAFGLNHALTEPGVDAQHYARLDVSHNTSNGYIDRQERDAWSVAFSLLSDLTPNLS
HTLALEYQDEHEDSPYWGTPVLNPKAGELKIDKHNRFNNYNVEDGRYEQRTIWVRSIIDYRINDSTTLRNTLYHLDSQRD
YRNLETYQYNADNSAVNRSTAYQVRHQGEQNGNQFELRHDNTLFGLDTTWSGGFEYKVNQTTNSPLNVKGASAVNPNNYR
PGHFYDIPGTMPGFVSDKTNEVTTKALFAENRLALTDKLSLLTGLRYDDIDLDVTNHRTVTASNPHHLKRSWDPVTGRIG
LTYQFIPSANVYVQYSTAAEQPNGTQDFDVSTGKQWEIGSKFDYLNGRGSATVAAYTIERKDFAVTDPLDPTSSIPVGQQ
TSKGIEIASSLRITDKLLAEGNFAWVDAQYDEFNEKNPAGVVVSRKGNTPTNVPDRVGNLWLTYDFSPKWQGGVDARYVA
SVFADNANTMTVPSYTLFGSFLSYKVDSHTTVTGRVRNLTNEVYAEFAHVSPAYYLGTPRTFELAVQTRF

Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=768, Percent_Identity=24.21875, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1786344, Length=734, Percent_Identity=22.8882833787466, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1787723, Length=342, Percent_Identity=25.4385964912281, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI1787024, Length=780, Percent_Identity=22.5641025641026, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 78280; Mature: 78280

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLTLLASLCGCLSVNVWAQSTVDLAPITIDGESGAEPGLSLDQSSGMASRLGLSVRDT
CCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCEECCC
PASVAIANRSDIERRGSQSFQDAANTLPGVNASAPPGFGGFVSYRGFTSSQITQMFNGVN
CCEEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCC
VSGGLARPVDSWIYDRVELVGGPSSLINGAGSVGGSLNYVTKLATRDEQAIEGRVSYGTY
CCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCHHHCCEEEECCC
DTTETAFGLNHALTEPGVDAQHYARLDVSHNTSNGYIDRQERDAWSVAFSLLSDLTPNLS
CCCHHHCCCHHHCCCCCCCHHHEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHCCCCCC
HTLALEYQDEHEDSPYWGTPVLNPKAGELKIDKHNRFNNYNVEDGRYEQRTIWVRSIIDY
EEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHEEEEHHHHE
RINDSTTLRNTLYHLDSQRDYRNLETYQYNADNSAVNRSTAYQVRHQGEQNGNQFELRHD
ECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEC
NTLFGLDTTWSGGFEYKVNQTTNSPLNVKGASAVNPNNYRPGHFYDIPGTMPGFVSDKTN
CEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
EVTTKALFAENRLALTDKLSLLTGLRYDDIDLDVTNHRTVTASNPHHLKRSWDPVTGRIG
CHHHHHHHHCCCEEHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHCCCCCCCCCEEE
LTYQFIPSANVYVQYSTAAEQPNGTQDFDVSTGKQWEIGSKFDYLNGRGSATVAAYTIER
EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
KDFAVTDPLDPTSSIPVGQQTSKGIEIASSLRITDKLLAEGNFAWVDAQYDEFNEKNPAG
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCC
VVVSRKGNTPTNVPDRVGNLWLTYDFSPKWQGGVDARYVASVFADNANTMTVPSYTLFGS
EEEECCCCCCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHH
FLSYKVDSHTTVTGRVRNLTNEVYAEFAHVSPAYYLGTPRTFELAVQTRF
HHHEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MKQLTLLASLCGCLSVNVWAQSTVDLAPITIDGESGAEPGLSLDQSSGMASRLGLSVRDT
CCHHHHHHHHHHHHEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCEECCC
PASVAIANRSDIERRGSQSFQDAANTLPGVNASAPPGFGGFVSYRGFTSSQITQMFNGVN
CCEEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCC
VSGGLARPVDSWIYDRVELVGGPSSLINGAGSVGGSLNYVTKLATRDEQAIEGRVSYGTY
CCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCHHHCCEEEECCC
DTTETAFGLNHALTEPGVDAQHYARLDVSHNTSNGYIDRQERDAWSVAFSLLSDLTPNLS
CCCHHHCCCHHHCCCCCCCHHHEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHCCCCCC
HTLALEYQDEHEDSPYWGTPVLNPKAGELKIDKHNRFNNYNVEDGRYEQRTIWVRSIIDY
EEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHEEEEHHHHE
RINDSTTLRNTLYHLDSQRDYRNLETYQYNADNSAVNRSTAYQVRHQGEQNGNQFELRHD
ECCCCHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCEEEEEEC
NTLFGLDTTWSGGFEYKVNQTTNSPLNVKGASAVNPNNYRPGHFYDIPGTMPGFVSDKTN
CEEEEECCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
EVTTKALFAENRLALTDKLSLLTGLRYDDIDLDVTNHRTVTASNPHHLKRSWDPVTGRIG
CHHHHHHHHCCCEEHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHCCCCCCCCCEEE
LTYQFIPSANVYVQYSTAAEQPNGTQDFDVSTGKQWEIGSKFDYLNGRGSATVAAYTIER
EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
KDFAVTDPLDPTSSIPVGQQTSKGIEIASSLRITDKLLAEGNFAWVDAQYDEFNEKNPAG
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCC
VVVSRKGNTPTNVPDRVGNLWLTYDFSPKWQGGVDARYVASVFADNANTMTVPSYTLFGS
EEEECCCCCCCCCCHHHCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHH
FLSYKVDSHTTVTGRVRNLTNEVYAEFAHVSPAYYLGTPRTFELAVQTRF
HHHEEECCCEEEEHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8576065 [H]