Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459528

Identifier: 77459528

GI number: 77459528

Start: 3787131

End: 3787382

Strand: Direct

Name: 77459528

Synonym: Pfl01_3306

Alternate gene names: NA

Gene position: 3787131-3787382 (Clockwise)

Preceding gene: 77459527

Following gene: 77459531

Centisome position: 58.82

GC content: 59.52

Gene sequence:

>252_bases
ATGAAAGACCTCATCGCACTCGGCTTCATCGTTTCCCTGATCGGCGCCACCTCCGCCATCGCTGCCCCACACGCCAGCAC
CCCGGTTGTCGCGGCTGCAACCATCGGCCAGTCCGGCACCCTGAACGTCGACACCGTCAGCGTCGATGCCGAACACCAAG
GCAGTCTCAAACTGCAACAGAACGCCGAACAGACCAAACTGTACATCGCGGAAAACCGCCCGGAATTCGGTTCCAAATAT
CAGCGCTACTGA

Upstream 100 bases:

>100_bases
CAACACCTTCGATAACGACTATGCGCAAGGGTGTTTTCACATCAAAACCCTCCAGCACTACAGTGGGCCCCATCTTCTCC
CCACTCTCTGGAGCAACATC

Downstream 100 bases:

>100_bases
GCGATCGGTTTGAGCTGCCAGAAACAGGAAACCCCGCCGAAGCGGGGTTTCTTGCATTTTGCGTCAGCGCACCAGTCGCG
CGGCCAGTGCCTTGGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MKDLIALGFIVSLIGATSAIAAPHASTPVVAAATIGQSGTLNVDTVSVDAEHQGSLKLQQNAEQTKLYIAENRPEFGSKY
QRY

Sequences:

>Translated_83_residues
MKDLIALGFIVSLIGATSAIAAPHASTPVVAAATIGQSGTLNVDTVSVDAEHQGSLKLQQNAEQTKLYIAENRPEFGSKY
QRY
>Mature_83_residues
MKDLIALGFIVSLIGATSAIAAPHASTPVVAAATIGQSGTLNVDTVSVDAEHQGSLKLQQNAEQTKLYIAENRPEFGSKY
QRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8774; Mature: 8774

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLIALGFIVSLIGATSAIAAPHASTPVVAAATIGQSGTLNVDTVSVDAEHQGSLKLQQ
CCHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEECC
NAEQTKLYIAENRPEFGSKYQRY
CCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKDLIALGFIVSLIGATSAIAAPHASTPVVAAATIGQSGTLNVDTVSVDAEHQGSLKLQQ
CCHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEECC
NAEQTKLYIAENRPEFGSKYQRY
CCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA