| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459527
Identifier: 77459527
GI number: 77459527
Start: 3786288
End: 3787022
Strand: Direct
Name: 77459527
Synonym: Pfl01_3305
Alternate gene names: NA
Gene position: 3786288-3787022 (Clockwise)
Preceding gene: 77459526
Following gene: 77459528
Centisome position: 58.81
GC content: 62.31
Gene sequence:
>735_bases ATGAAACGATTTGCCGCTTGTCTGCTGTCCATGCTGGCCCTGACGGCCAACGCGGCGGATTTGCAACTGCTCACCGACAA CCACCCGCCCCTGCATTTCATGCAAGGCAATCAGCTCGCAGGATTCGGTGTGGACGTGGTGCAGGCCCTGGCGACCCAGA CCGGCGACCGTATCCATCTGCAACAAGTCCCGCTGCTGCGCGCCCTGCGCATGGCCAGCGATACCCCCGACACCGGCGTA TTCACCGTGCTGCGTACCGACGAACGCGACGATCGCTATCAATGGGTCGGGCCGCTGATCGAAGTCGAAACCGCGCTGTA CGCCCGCGACAATCTCCAGCCTCCCGTGCACAGCCTGCGTGAAGCCGATCACCTGGGCCGGATCACCGTGCCGCGCAAAT GGCTGGTCTACAGCTACCTGCAAGGGCAAGACCTGAACAATCTCTACGGCGTGGAAACCCCGGAGCAGATGATGCGACTG TTCAGCCTGGGGCGTACCGATTTCGTGGTCTCCGATACCTGGTCCAAAGCCGCCCTCGCCCGCGAACAAGGCATGGAGCC GGGACGCTTGCAGTACCAGATCCCGTTGATGAAACAGAACACCTACATTGCCTTTTCGCCGCAGACCGATCCAAAACAGG TCGCCCGCTGGCAGCAGGCGCTGGACACATTGCGGGCCGATGGCCGTCTGGAGCAGCTGCGCCAGCGCTGGCTGAGCAAT AACCTACCGCGCTGA
Upstream 100 bases:
>100_bases CGATAAGCCTTGTTCTCTGACACAAAAGCCCCGCTGTTTCTCGACGACAGCCGTCATGGCTCGTACTAAGCTGCGCGATT GATTTGTTCAGGGACGATCC
Downstream 100 bases:
>100_bases TCGCGCATCAACACCTTCGATAACGACTATGCGCAAGGGTGTTTTCACATCAAAACCCTCCAGCACTACAGTGGGCCCCA TCTTCTCCCCACTCTCTGGA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MKRFAACLLSMLALTANAADLQLLTDNHPPLHFMQGNQLAGFGVDVVQALATQTGDRIHLQQVPLLRALRMASDTPDTGV FTVLRTDERDDRYQWVGPLIEVETALYARDNLQPPVHSLREADHLGRITVPRKWLVYSYLQGQDLNNLYGVETPEQMMRL FSLGRTDFVVSDTWSKAALAREQGMEPGRLQYQIPLMKQNTYIAFSPQTDPKQVARWQQALDTLRADGRLEQLRQRWLSN NLPR
Sequences:
>Translated_244_residues MKRFAACLLSMLALTANAADLQLLTDNHPPLHFMQGNQLAGFGVDVVQALATQTGDRIHLQQVPLLRALRMASDTPDTGV FTVLRTDERDDRYQWVGPLIEVETALYARDNLQPPVHSLREADHLGRITVPRKWLVYSYLQGQDLNNLYGVETPEQMMRL FSLGRTDFVVSDTWSKAALAREQGMEPGRLQYQIPLMKQNTYIAFSPQTDPKQVARWQQALDTLRADGRLEQLRQRWLSN NLPR >Mature_244_residues MKRFAACLLSMLALTANAADLQLLTDNHPPLHFMQGNQLAGFGVDVVQALATQTGDRIHLQQVPLLRALRMASDTPDTGV FTVLRTDERDDRYQWVGPLIEVETALYARDNLQPPVHSLREADHLGRITVPRKWLVYSYLQGQDLNNLYGVETPEQMMRL FSLGRTDFVVSDTWSKAALAREQGMEPGRLQYQIPLMKQNTYIAFSPQTDPKQVARWQQALDTLRADGRLEQLRQRWLSN NLPR
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27854; Mature: 27854
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFAACLLSMLALTANAADLQLLTDNHPPLHFMQGNQLAGFGVDVVQALATQTGDRIHL CHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEH QQVPLLRALRMASDTPDTGVFTVLRTDERDDRYQWVGPLIEVETALYARDNLQPPVHSLR HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCHHHHHHHHHHHCCCCCCHHHHHH EADHLGRITVPRKWLVYSYLQGQDLNNLYGVETPEQMMRLFSLGRTDFVVSDTWSKAALA HHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHH REQGMEPGRLQYQIPLMKQNTYIAFSPQTDPKQVARWQQALDTLRADGRLEQLRQRWLSN HHHCCCCCCEEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NLPR CCCC >Mature Secondary Structure MKRFAACLLSMLALTANAADLQLLTDNHPPLHFMQGNQLAGFGVDVVQALATQTGDRIHL CHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEH QQVPLLRALRMASDTPDTGVFTVLRTDERDDRYQWVGPLIEVETALYARDNLQPPVHSLR HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHCHHHHHHHHHHHCCCCCCHHHHHH EADHLGRITVPRKWLVYSYLQGQDLNNLYGVETPEQMMRLFSLGRTDFVVSDTWSKAALA HHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHH REQGMEPGRLQYQIPLMKQNTYIAFSPQTDPKQVARWQQALDTLRADGRLEQLRQRWLSN HHHCCCCCCEEEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC NLPR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA