| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is alx [H]
Identifier: 77459481
GI number: 77459481
Start: 3740669
End: 3741646
Strand: Direct
Name: alx [H]
Synonym: Pfl01_3259
Alternate gene names: 77459481
Gene position: 3740669-3741646 (Clockwise)
Preceding gene: 77459479
Following gene: 77459484
Centisome position: 58.1
GC content: 58.79
Gene sequence:
>978_bases ATGCACCCCATCAACATCGGCGAACCCTGGATGTGGGTCGCCTTCATCGTTTTTGTCCTCGCCATGCTGGCCGTCGACCT GTTCGTCCTCGGTGGGCGCAAGGCGCATCGGGTTTCGGTACGGGAAGCCTCATCCTGGGTATTTGCCTGGTGCATGCTGG CGATGGCTTTCGCCGGATTGCTCTGGTGGTATCTCAACGGCGAATTCGGCCCCGAAATCGCCAAGGTCAAGACTCTGGAA TTCCTCACCGGTTACTTGATCGAGCAGTCGCTGTCGATCGACAACATGTTCGTCTTCGTGATGATCTTCAGCTACTTCGC CGTGCCCCCGGAGTTGCAGCGCCGGGTACTGCTGTACGGCGTGCTCGGGGCAATCGTGATGCGCGCGGCGATGATCTTTG CCGGGGTATGGCTGGTGTCGCAGTTCACGTGGCTGCTGTATGTGTTCGGCGTGTTCCTGATCATCACCGGGATCAAGATG CTGGTGTTTGCCGAGCAGCAACCGGACCTTGATAACAACCCGCTGCTGCGCTGGGTGCGCGGGCATTTGCGGATCACCAA CGGCTTTCACGGCGAGCGTTTTTTTGTGCTGCAGAACGGTGTGCGCTGGGCCACGCCGATGTTTCTGGTGCTGGTGCTGA TCGAAGCCAGCGACCTGATGTTTGCGGTCGACAGCATCCCGGCGATTTTCGCGGTGACGACTGATCCGTTCATCATTTTC ACCTCGAACATTTTCGCGATCATGGGCCTGCGGGCGCTGTACTTTCTGCTGGCGGACATGGCCGACCGCTTTCATCTGCT CAAGTACGGGCTGGCGCTGGTGCTGGTGTTCATCGGCGGGAAGATGACGGTGATGCCGTGGTTTCACATGCCGGTGGAGT GGTCGCTGGCGATCGTCGGCGGGCTGATTCTGGCGTCGGTGGTGCTGAGTCTGATCCTGACGAAGGACAAATCGCCTGAA GAAAGTCAGGCGAAATAA
Upstream 100 bases:
>100_bases AACGAACAATACCCACGAAATAAACGATTTTTCTTTGCCGGAAGGCTCCTACTAGCATGGCCCCGTCTACCCCGAAAAAC ACAAAGACAGGGAGAACGGC
Downstream 100 bases:
>100_bases CAGCCGGGGGAGCGAACGTGGTTCGCTTCCCCGGTTTTGGGCTTATTTATCCGACTTGATGCTGGTCCAGACCCGGGTCC GCACCCGCTCCAGTTTCTGC
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MHPINIGEPWMWVAFIVFVLAMLAVDLFVLGGRKAHRVSVREASSWVFAWCMLAMAFAGLLWWYLNGEFGPEIAKVKTLE FLTGYLIEQSLSIDNMFVFVMIFSYFAVPPELQRRVLLYGVLGAIVMRAAMIFAGVWLVSQFTWLLYVFGVFLIITGIKM LVFAEQQPDLDNNPLLRWVRGHLRITNGFHGERFFVLQNGVRWATPMFLVLVLIEASDLMFAVDSIPAIFAVTTDPFIIF TSNIFAIMGLRALYFLLADMADRFHLLKYGLALVLVFIGGKMTVMPWFHMPVEWSLAIVGGLILASVVLSLILTKDKSPE ESQAK
Sequences:
>Translated_325_residues MHPINIGEPWMWVAFIVFVLAMLAVDLFVLGGRKAHRVSVREASSWVFAWCMLAMAFAGLLWWYLNGEFGPEIAKVKTLE FLTGYLIEQSLSIDNMFVFVMIFSYFAVPPELQRRVLLYGVLGAIVMRAAMIFAGVWLVSQFTWLLYVFGVFLIITGIKM LVFAEQQPDLDNNPLLRWVRGHLRITNGFHGERFFVLQNGVRWATPMFLVLVLIEASDLMFAVDSIPAIFAVTTDPFIIF TSNIFAIMGLRALYFLLADMADRFHLLKYGLALVLVFIGGKMTVMPWFHMPVEWSLAIVGGLILASVVLSLILTKDKSPE ESQAK >Mature_325_residues MHPINIGEPWMWVAFIVFVLAMLAVDLFVLGGRKAHRVSVREASSWVFAWCMLAMAFAGLLWWYLNGEFGPEIAKVKTLE FLTGYLIEQSLSIDNMFVFVMIFSYFAVPPELQRRVLLYGVLGAIVMRAAMIFAGVWLVSQFTWLLYVFGVFLIITGIKM LVFAEQQPDLDNNPLLRWVRGHLRITNGFHGERFFVLQNGVRWATPMFLVLVLIEASDLMFAVDSIPAIFAVTTDPFIIF TSNIFAIMGLRALYFLLADMADRFHLLKYGLALVLVFIGGKMTVMPWFHMPVEWSLAIVGGLILASVVLSLILTKDKSPE ESQAK
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=306, Percent_Identity=53.921568627451, Blast_Score=348, Evalue=2e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 36819; Mature: 36819
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPINIGEPWMWVAFIVFVLAMLAVDLFVLGGRKAHRVSVREASSWVFAWCMLAMAFAGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHH LWWYLNGEFGPEIAKVKTLEFLTGYLIEQSLSIDNMFVFVMIFSYFAVPPELQRRVLLYG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLGAIVMRAAMIFAGVWLVSQFTWLLYVFGVFLIITGIKMLVFAEQQPDLDNNPLLRWVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHH GHLRITNGFHGERFFVLQNGVRWATPMFLVLVLIEASDLMFAVDSIPAIFAVTTDPFIIF HHEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE TSNIFAIMGLRALYFLLADMADRFHLLKYGLALVLVFIGGKMTVMPWFHMPVEWSLAIVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHH GLILASVVLSLILTKDKSPEESQAK HHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MHPINIGEPWMWVAFIVFVLAMLAVDLFVLGGRKAHRVSVREASSWVFAWCMLAMAFAGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHH LWWYLNGEFGPEIAKVKTLEFLTGYLIEQSLSIDNMFVFVMIFSYFAVPPELQRRVLLYG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH VLGAIVMRAAMIFAGVWLVSQFTWLLYVFGVFLIITGIKMLVFAEQQPDLDNNPLLRWVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHH GHLRITNGFHGERFFVLQNGVRWATPMFLVLVLIEASDLMFAVDSIPAIFAVTTDPFIIF HHEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEE TSNIFAIMGLRALYFLLADMADRFHLLKYGLALVLVFIGGKMTVMPWFHMPVEWSLAIVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHH GLILASVVLSLILTKDKSPEESQAK HHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]