Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459426

Identifier: 77459426

GI number: 77459426

Start: 3679575

End: 3680027

Strand: Direct

Name: 77459426

Synonym: Pfl01_3204

Alternate gene names: NA

Gene position: 3679575-3680027 (Clockwise)

Preceding gene: 77459425

Following gene: 77459427

Centisome position: 57.15

GC content: 57.62

Gene sequence:

>453_bases
ATGACCGACTCTCCCACTTATCAGGTGATCACCATGAAAGTCCTGCACTTGCTTGCCGCCCCGCTCGCCGCTCTGGCCCT
CACCATCAGCGCTTCGGCACTGGCCCACGGTACCGATTCCCCGTCCGAGAAAATCTCGGTGCTGCAGGATCAGATGCTGA
AAAACGTCCCGGGCAAAAAAGCCATGATGATCGAAGTCGATTACAAACCCGGCCAGTCCTCGATCGCCCACAAACACGAC
GGCACCGCCATGGCCTACGTGCTCGAAGGCGAGATCGTTTCCCAGGTCAAGGGTGAGCAACCGATCACCTACAAGAAGGG
CCAGTACTGGTACGAGCCGGCCGGCTCCGAGCATTTGATCTCGAAAAACGCCAGCAAGAGCAAGCCGGCCAGGTTGCTGG
TGTTCATGGTGCTGTCACCCGACGAGCAAGTGCTGATCCCATTGAAAAACTGA

Upstream 100 bases:

>100_bases
CCAGCGATGGCGTATTTGAATGCGCTGAAATCCCCCAGATTGGTCCCCCGAACTTCCCGAATATTGGCCGTTTGAATACC
CCGGCACGCGGACTACTGTG

Downstream 100 bases:

>100_bases
TGGTTGTTTAACCAGCCATAAATAAAAGGCGGAAATTTTTGATTTGCGCCTTTTTTATTTCTCGCGGCAATTAATCAAAA
ATGCTTACAACCAATAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Region; Cupin Domain Protein; Cupin 2 Barrel; Cupin Domain-Containing Protein; Cupin Domain-Containing

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKKAMMIEVDYKPGQSSIAHKHD
GTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLISKNASKSKPARLLVFMVLSPDEQVLIPLKN

Sequences:

>Translated_150_residues
MTDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKKAMMIEVDYKPGQSSIAHKHD
GTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLISKNASKSKPARLLVFMVLSPDEQVLIPLKN
>Mature_149_residues
TDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKKAMMIEVDYKPGQSSIAHKHDG
TAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLISKNASKSKPARLLVFMVLSPDEQVLIPLKN

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16316; Mature: 16185

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCE
AMMIEVDYKPGQSSIAHKHDGTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLI
EEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCEEECCCEEECCCCCCCEE
SKNASKSKPARLLVFMVLSPDEQVLIPLKN
CCCCCCCCCCEEEEEEEECCCCEEEEEECC
>Mature Secondary Structure 
TDSPTYQVITMKVLHLLAAPLAALALTISASALAHGTDSPSEKISVLQDQMLKNVPGKK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCE
AMMIEVDYKPGQSSIAHKHDGTAMAYVLEGEIVSQVKGEQPITYKKGQYWYEPAGSEHLI
EEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHCCCCCCEEECCCEEECCCCCCCEE
SKNASKSKPARLLVFMVLSPDEQVLIPLKN
CCCCCCCCCCEEEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA