Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

Click here to switch to the map view.

The map label for this gene is 77459344

Identifier: 77459344

GI number: 77459344

Start: 3583716

End: 3584219

Strand: Reverse

Name: 77459344

Synonym: Pfl01_3122

Alternate gene names: NA

Gene position: 3584219-3583716 (Counterclockwise)

Preceding gene: 77459345

Following gene: 77459343

Centisome position: 55.67

GC content: 58.93

Gene sequence:

>504_bases
ATGAACCCCTTGCCGTGGGACAAGCATTGGTATGCCTGGCGGCTGGATCCCGAGGTTTACGGAGGCACGTGGGACAGCGG
GATTGGATCGAAGTTGAAAGGCGGTCGCTGGAATATACCCGGACGACGCGTCGTCTACGCCTCAGTCGATCCTTCCTCGG
CCATTCTGGAGGTGGCAGCCAACCGCAGTTTTGATGCCCTGGACCGCGAACCTTATGTATTGACGTGCTTTGAGGTCATC
AGCGACGCGAAGGTGAAAATCGTGCAGCCCGAAGAGGTGCCGAACCCTTACTGGCTGAGCCCTGCACAGCCTTCACCCAA
TCAGCAATTGTTCGCCGACGCGTTGCTGGCCGAGCACCCGTTTGTATTGATTCCGTCGGCGGCAACCCGCCATTCGTGGA
ACTTGCTGGTGAGCTGCGACCTGGCAGAAGGGCAGTTCAGGATGGTCTCGCAGGAGCGGTTCGGCCTCGATACCCGCTTA
CTCGCGGAAATGGCGTTAGTCTGA

Upstream 100 bases:

>100_bases
CCTATTTTCACGGTCATGTGCCGCTGGAGTTGACCCTGCATCCATTGGGTTTTCAGATGGTCGAGCAGTATTTGCAGCAG
CTTATCTACGGGGTTTACCC

Downstream 100 bases:

>100_bases
TGAAGCGTCATGCCGCATTTTGCATAACCTCAGCACCCAACGGTCTAAATCGCGCCCTATAAATCGTCATCCGCCATCGC
ACATCCCTGCATAAACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MNPLPWDKHWYAWRLDPEVYGGTWDSGIGSKLKGGRWNIPGRRVVYASVDPSSAILEVAANRSFDALDREPYVLTCFEVI
SDAKVKIVQPEEVPNPYWLSPAQPSPNQQLFADALLAEHPFVLIPSAATRHSWNLLVSCDLAEGQFRMVSQERFGLDTRL
LAEMALV

Sequences:

>Translated_167_residues
MNPLPWDKHWYAWRLDPEVYGGTWDSGIGSKLKGGRWNIPGRRVVYASVDPSSAILEVAANRSFDALDREPYVLTCFEVI
SDAKVKIVQPEEVPNPYWLSPAQPSPNQQLFADALLAEHPFVLIPSAATRHSWNLLVSCDLAEGQFRMVSQERFGLDTRL
LAEMALV
>Mature_167_residues
MNPLPWDKHWYAWRLDPEVYGGTWDSGIGSKLKGGRWNIPGRRVVYASVDPSSAILEVAANRSFDALDREPYVLTCFEVI
SDAKVKIVQPEEVPNPYWLSPAQPSPNQQLFADALLAEHPFVLIPSAATRHSWNLLVSCDLAEGQFRMVSQERFGLDTRL
LAEMALV

Specific function: Unknown

COG id: COG5654

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18781; Mature: 18781

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLPWDKHWYAWRLDPEVYGGTWDSGIGSKLKGGRWNIPGRRVVYASVDPSSAILEVAA
CCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHC
NRSFDALDREPYVLTCFEVISDAKVKIVQPEEVPNPYWLSPAQPSPNQQLFADALLAEHP
CCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHCCC
FVLIPSAATRHSWNLLVSCDLAEGQFRMVSQERFGLDTRLLAEMALV
EEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MNPLPWDKHWYAWRLDPEVYGGTWDSGIGSKLKGGRWNIPGRRVVYASVDPSSAILEVAA
CCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCEECCCCCEEEEEECCCCHHHHHHHC
NRSFDALDREPYVLTCFEVISDAKVKIVQPEEVPNPYWLSPAQPSPNQQLFADALLAEHP
CCCCCCCCCCCEEEEEEHHHCCCEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHHHCCC
FVLIPSAATRHSWNLLVSCDLAEGQFRMVSQERFGLDTRLLAEMALV
EEEECCCCCCCCCEEEEEEECCCCCEEEEHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA