| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77459331
Identifier: 77459331
GI number: 77459331
Start: 3568938
End: 3569156
Strand: Direct
Name: 77459331
Synonym: Pfl01_3109
Alternate gene names: NA
Gene position: 3568938-3569156 (Clockwise)
Preceding gene: 77459329
Following gene: 77459334
Centisome position: 55.43
GC content: 59.82
Gene sequence:
>219_bases ATGGACGATCCAGTCGACAACAAACCACCGACCTTCTGGCAGATGCTGCACAGCGTCATGGCGGCGGCGTTCGGGGTGCA AAGCGGCAAGAACCGGGCGAGGGATTTCACCCACGGCAAGCCGAGTCATTTCATCTTTCTGGGCATTGCGTTCACGGCAG TGTTCGCCCTGACGCTGTTCGGCATCGTTCAACTGGTGGTGCATCTGGCCGGCGTCTGA
Upstream 100 bases:
>100_bases GTAGATAGTTATGCCGGCGCCACCAAGGCATTACCAACGGTTTCGCGCGCTGTCGGCCGATTGACTATGCTCAACAGGCA CACTTTGAGACGAGGGATGT
Downstream 100 bases:
>100_bases CTCGCTCAGTGCATCAGTGTCTGCAGATTGAACGGATAGCGGTAGGAAACCGGACGGCCTTTCGCCGAGAGCTTGCGAAA GTGCACGCCATAGTCCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MDDPVDNKPPTFWQMLHSVMAAAFGVQSGKNRARDFTHGKPSHFIFLGIAFTAVFALTLFGIVQLVVHLAGV
Sequences:
>Translated_72_residues MDDPVDNKPPTFWQMLHSVMAAAFGVQSGKNRARDFTHGKPSHFIFLGIAFTAVFALTLFGIVQLVVHLAGV >Mature_72_residues MDDPVDNKPPTFWQMLHSVMAAAFGVQSGKNRARDFTHGKPSHFIFLGIAFTAVFALTLFGIVQLVVHLAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7870; Mature: 7870
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDPVDNKPPTFWQMLHSVMAAAFGVQSGKNRARDFTHGKPSHFIFLGIAFTAVFALTLF CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH GIVQLVVHLAGV HHHHHHHHHHCC >Mature Secondary Structure MDDPVDNKPPTFWQMLHSVMAAAFGVQSGKNRARDFTHGKPSHFIFLGIAFTAVFALTLF CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH GIVQLVVHLAGV HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA