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The map label for this gene is 77459308

Identifier: 77459308

GI number: 77459308

Start: 3535740

End: 3536960

Strand: Reverse

Name: 77459308

Synonym: Pfl01_3086

Alternate gene names: NA

Gene position: 3536960-3535740 (Counterclockwise)

Preceding gene: 77459309

Following gene: 77459307

Centisome position: 54.94

GC content: 64.54

Gene sequence:

>1221_bases
ATGACGACTGCCAACAACACTGCTGCCGTGGAAAAGGGCGATGCTGCCCTCGGCGCGCAACTGGTGCGTGACATCAGCCT
GCCGGCGCTGGTGCTGCACCGTGAAGCGCTGGAACACAACATCCGCTGGATGCAGAAGTTCGTCAGCGACAGCGGCGCCG
AACTCGCGCCCCACGGCAAGACCAGCATGACCCCGGCGCTGTTTCGTCGTCAGCTCGACGCCGGCGCGTGGGGCATCACC
CTGGCCAGCGCCACCCAGACCCGAGCTGCTTACGCCCACGGCGTGCGCCGGGTGTTGATGGCCAACCAACTGGTCGGTAC
GCCGAACATGGCGCTGATTGCCGATCTGCTGGCGGCCGATTCCGGCTTCGATTTCTATTGCATGGTCGATCACCCGGACA
ACGTCGCCGATCTGGGCGCTTATTTCGCATCGCGCGGTGTGCGTCTGAACGTGATGATCGAATACGGCGTGGTCGGCGGC
CGTTGCGGTTGCCGCAGCGAGCAGGAAGTCATTGAACTGGCCAAGGCTATCGGTACGCAACCGGCGCTGGCCTTGACCGG
TATCGAAGGTTACGAAGGCGTGATCCATGGCGATCACGCCGTCAGCGGCATCCGTGAATTCGCGGCTTCGCTGGTACGCC
TGGCCGTGCAGTTGCAGGACAGCGGCGCATTCGCCATTGCCAAGCCGATCATCACTGCGTCGGGTTCGGCGTGGTACGAC
CTGATTGCCGAATCGTTCGAAGCGCAGAACGCTGGCGGGCGTTTCCTCAGCGTGCTGCGTCCCGGCAGTTACGTGGCTCA
CGACCATGGCATCTATAAGGAGGCGCAGTGCTGCGTGCTCGATCGTCGCAGTGACCTGCACGAAGGGCTGCGTCCGGCGC
TGGAGGTCTGGGCCCACGTGCAGTCGCTGCCGGAGCCGGGCTTCGCGGTGATTGCCCTGGGCAAGCGTGACGTGGCGTTC
GATGCCGGGATGCCGGTGCCGCTGCTGCGTTACAAGGCCGGCGTGCTGCCGGCGGTGGGCGACGATGTCGGCGCCTGCAA
GGTGACGGCGGTGATGGACCAGCACGCGTTCATGACCGTGGCGCCGGGCGTGGAGTTGCGCGTGGGCGACATCATTTCCT
TCGGCACTTCGCACCCATGCCTGACCTTCGACAAGTGGCGCGTGGGGCTGCTGGTGGACGAGCAACTGTCGGTGATCGAA
ACCATGGAAACCTGTTTCTGA

Upstream 100 bases:

>100_bases
CGACTATCGCCGGGTCTTGATCGAGAGCGCCAACAGCCTCGCCCGGCGAATCAACGAATAACCGCGCCTGCCTGCGGGCG
CGACTGTGAGGAGTTCGACC

Downstream 100 bases:

>100_bases
TGAGCGCGCTCAGTCCTTTGAGTCCGAACACCCCGCGCATCGCCCTGATCGGCGAATGCATGATCGAACTCCAGCAACGT
GCCGACGGCAGCCTGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTTANNTAAVEKGDAALGAQLVRDISLPALVLHREALEHNIRWMQKFVSDSGAELAPHGKTSMTPALFRRQLDAGAWGIT
LASATQTRAAYAHGVRRVLMANQLVGTPNMALIADLLAADSGFDFYCMVDHPDNVADLGAYFASRGVRLNVMIEYGVVGG
RCGCRSEQEVIELAKAIGTQPALALTGIEGYEGVIHGDHAVSGIREFAASLVRLAVQLQDSGAFAIAKPIITASGSAWYD
LIAESFEAQNAGGRFLSVLRPGSYVAHDHGIYKEAQCCVLDRRSDLHEGLRPALEVWAHVQSLPEPGFAVIALGKRDVAF
DAGMPVPLLRYKAGVLPAVGDDVGACKVTAVMDQHAFMTVAPGVELRVGDIISFGTSHPCLTFDKWRVGLLVDEQLSVIE
TMETCF

Sequences:

>Translated_406_residues
MTTANNTAAVEKGDAALGAQLVRDISLPALVLHREALEHNIRWMQKFVSDSGAELAPHGKTSMTPALFRRQLDAGAWGIT
LASATQTRAAYAHGVRRVLMANQLVGTPNMALIADLLAADSGFDFYCMVDHPDNVADLGAYFASRGVRLNVMIEYGVVGG
RCGCRSEQEVIELAKAIGTQPALALTGIEGYEGVIHGDHAVSGIREFAASLVRLAVQLQDSGAFAIAKPIITASGSAWYD
LIAESFEAQNAGGRFLSVLRPGSYVAHDHGIYKEAQCCVLDRRSDLHEGLRPALEVWAHVQSLPEPGFAVIALGKRDVAF
DAGMPVPLLRYKAGVLPAVGDDVGACKVTAVMDQHAFMTVAPGVELRVGDIISFGTSHPCLTFDKWRVGLLVDEQLSVIE
TMETCF
>Mature_405_residues
TTANNTAAVEKGDAALGAQLVRDISLPALVLHREALEHNIRWMQKFVSDSGAELAPHGKTSMTPALFRRQLDAGAWGITL
ASATQTRAAYAHGVRRVLMANQLVGTPNMALIADLLAADSGFDFYCMVDHPDNVADLGAYFASRGVRLNVMIEYGVVGGR
CGCRSEQEVIELAKAIGTQPALALTGIEGYEGVIHGDHAVSGIREFAASLVRLAVQLQDSGAFAIAKPIITASGSAWYDL
IAESFEAQNAGGRFLSVLRPGSYVAHDHGIYKEAQCCVLDRRSDLHEGLRPALEVWAHVQSLPEPGFAVIALGKRDVAFD
AGMPVPLLRYKAGVLPAVGDDVGACKVTAVMDQHAFMTVAPGVELRVGDIISFGTSHPCLTFDKWRVGLLVDEQLSVIET
METCF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 43426; Mature: 43295

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTANNTAAVEKGDAALGAQLVRDISLPALVLHREALEHNIRWMQKFVSDSGAELAPHGK
CCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSMTPALFRRQLDAGAWGITLASATQTRAAYAHGVRRVLMANQLVGTPNMALIADLLAAD
CCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
SGFDFYCMVDHPDNVADLGAYFASRGVRLNVMIEYGVVGGRCGCRSEQEVIELAKAIGTQ
CCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
PALALTGIEGYEGVIHGDHAVSGIREFAASLVRLAVQLQDSGAFAIAKPIITASGSAWYD
CCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCHHHH
LIAESFEAQNAGGRFLSVLRPGSYVAHDHGIYKEAQCCVLDRRSDLHEGLRPALEVWAHV
HHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHH
QSLPEPGFAVIALGKRDVAFDAGMPVPLLRYKAGVLPAVGDDVGACKVTAVMDQHAFMTV
HHCCCCCEEEEEECCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEE
APGVELRVGDIISFGTSHPCLTFDKWRVGLLVDEQLSVIETMETCF
CCCCEEEECCCEECCCCCCCEEECCEEEEEEECHHHHHHHHHHHCC
>Mature Secondary Structure 
TTANNTAAVEKGDAALGAQLVRDISLPALVLHREALEHNIRWMQKFVSDSGAELAPHGK
CCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TSMTPALFRRQLDAGAWGITLASATQTRAAYAHGVRRVLMANQLVGTPNMALIADLLAAD
CCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
SGFDFYCMVDHPDNVADLGAYFASRGVRLNVMIEYGVVGGRCGCRSEQEVIELAKAIGTQ
CCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
PALALTGIEGYEGVIHGDHAVSGIREFAASLVRLAVQLQDSGAFAIAKPIITASGSAWYD
CCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEECCCCHHHH
LIAESFEAQNAGGRFLSVLRPGSYVAHDHGIYKEAQCCVLDRRSDLHEGLRPALEVWAHV
HHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCHHEEECCHHHHHHHHHHHHHHHHHH
QSLPEPGFAVIALGKRDVAFDAGMPVPLLRYKAGVLPAVGDDVGACKVTAVMDQHAFMTV
HHCCCCCEEEEEECCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEE
APGVELRVGDIISFGTSHPCLTFDKWRVGLLVDEQLSVIETMETCF
CCCCEEEECCCEECCCCCCCEEECCEEEEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]