| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is kdgK [H]
Identifier: 77459307
GI number: 77459307
Start: 3534805
End: 3535740
Strand: Reverse
Name: kdgK [H]
Synonym: Pfl01_3085
Alternate gene names: 77459307
Gene position: 3535740-3534805 (Counterclockwise)
Preceding gene: 77459308
Following gene: 77459304
Centisome position: 54.92
GC content: 63.03
Gene sequence:
>936_bases ATGAGCGCGCTCAGTCCTTTGAGTCCGAACACCCCGCGCATCGCCCTGATCGGCGAATGCATGATCGAACTCCAGCAACG TGCCGACGGCAGCCTGCAACAGAGTTTTGGCGGTGACACGCTGAACACGGCGGTCTATCTGTCCCGCGCGATGGGCGGCA AGGCGCAGGTCGATTACGTCACGGCGCTGGGCGACGACAGCTTCAGCGATGCGATGTGCCGCATTTGGGCCGACGAAGGC ATTGGTCTGGATCTGGTCCAGCGCTTGCCCGGTCGTTTGCCGGGCCTGTATTGCATTCAAACGGACGCTGCCGGCGAACG TCGTTTCCTTTACTGGCGCAACGAAGCCGCTGTGCGCGACTGCTTCACCACGCCGGCGTCCGCGCCGATTCTGGCGGCGC TGGCGGATTACGACGTGCTGTATTTCAGCGGTATCACGCTGGCGGTACTCGGAGCCCTGGGTCGGGAAAAACTGATCGAG ACCTTGATCGAAGCCCGTCAGCGTGACGCGCGAATCGTCTTCGACAACAACTACCGCCCACGCCTGTGGGCTTCAGTGGA GGAGGCGCGAGCGGCGTATCGCAGCGTGTTGCCTCACGTCGATCTGGCATTGCTGACGGTGGACGACGAACAGGCGCTGT TCCATTTCGAAGACTGTGACGCGGTGTTTGCAGCGTACGCGCAGATCGGCACGCCGGAAGTGGTGCTCAAGCGTGGCGCC GAAGCGTGCTTGATCCGTTGTGACGGGGAAGCGTTTGAAGTCCCGGCGCAGAAGGTCGAGACAGTGGTGGACACCACGGC GGCGGGGGATTCGTTCAGTGCGGCGTATCTGGCGAGTCGCTTGTCCGGCGCAAGCCCTGTGCGGGCGGCGGAGGCGGGGC ATCGCTTGGCCAGTCAGGTCATTCAAGTGCCTGGGGCGTTGATCCCCAAGGATTGA
Upstream 100 bases:
>100_bases TCGGCACTTCGCACCCATGCCTGACCTTCGACAAGTGGCGCGTGGGGCTGCTGGTGGACGAGCAACTGTCGGTGATCGAA ACCATGGAAACCTGTTTCTG
Downstream 100 bases:
>100_bases TGCCGATCCCTGAAGGCGCTGCCGAAAGCCGCGCCTTCAGGGCACTGGATCAGTCGCGGTAAAACACCTGCACCAGGTGA TACCCGAACTTGCTCTTGAT
Product: 2-keto-3-deoxygluconate kinase
Products: NA
Alternate protein names: 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase [H]
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSALSPLSPNTPRIALIGECMIELQQRADGSLQQSFGGDTLNTAVYLSRAMGGKAQVDYVTALGDDSFSDAMCRIWADEG IGLDLVQRLPGRLPGLYCIQTDAAGERRFLYWRNEAAVRDCFTTPASAPILAALADYDVLYFSGITLAVLGALGREKLIE TLIEARQRDARIVFDNNYRPRLWASVEEARAAYRSVLPHVDLALLTVDDEQALFHFEDCDAVFAAYAQIGTPEVVLKRGA EACLIRCDGEAFEVPAQKVETVVDTTAAGDSFSAAYLASRLSGASPVRAAEAGHRLASQVIQVPGALIPKD
Sequences:
>Translated_311_residues MSALSPLSPNTPRIALIGECMIELQQRADGSLQQSFGGDTLNTAVYLSRAMGGKAQVDYVTALGDDSFSDAMCRIWADEG IGLDLVQRLPGRLPGLYCIQTDAAGERRFLYWRNEAAVRDCFTTPASAPILAALADYDVLYFSGITLAVLGALGREKLIE TLIEARQRDARIVFDNNYRPRLWASVEEARAAYRSVLPHVDLALLTVDDEQALFHFEDCDAVFAAYAQIGTPEVVLKRGA EACLIRCDGEAFEVPAQKVETVVDTTAAGDSFSAAYLASRLSGASPVRAAEAGHRLASQVIQVPGALIPKD >Mature_310_residues SALSPLSPNTPRIALIGECMIELQQRADGSLQQSFGGDTLNTAVYLSRAMGGKAQVDYVTALGDDSFSDAMCRIWADEGI GLDLVQRLPGRLPGLYCIQTDAAGERRFLYWRNEAAVRDCFTTPASAPILAALADYDVLYFSGITLAVLGALGREKLIET LIEARQRDARIVFDNNYRPRLWASVEEARAAYRSVLPHVDLALLTVDDEQALFHFEDCDAVFAAYAQIGTPEVVLKRGAE ACLIRCDGEAFEVPAQKVETVVDTTAAGDSFSAAYLASRLSGASPVRAAEAGHRLASQVIQVPGALIPKD
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=305, Percent_Identity=51.1475409836066, Blast_Score=296, Evalue=9e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.45 [H]
Molecular weight: Translated: 33590; Mature: 33459
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALSPLSPNTPRIALIGECMIELQQRADGSLQQSFGGDTLNTAVYLSRAMGGKAQVDYV CCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEE TALGDDSFSDAMCRIWADEGIGLDLVQRLPGRLPGLYCIQTDAAGERRFLYWRNEAAVRD EECCCCCCCHHHHEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCHHHHH CFTTPASAPILAALADYDVLYFSGITLAVLGALGREKLIETLIEARQRDARIVFDNNYRP HHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC RLWASVEEARAAYRSVLPHVDLALLTVDDEQALFHFEDCDAVFAAYAQIGTPEVVLKRGA HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHCCCHHHHHHCCC EACLIRCDGEAFEVPAQKVETVVDTTAAGDSFSAAYLASRLSGASPVRAAEAGHRLASQV CEEEEEECCCCEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IQVPGALIPKD HHCCCCCCCCC >Mature Secondary Structure SALSPLSPNTPRIALIGECMIELQQRADGSLQQSFGGDTLNTAVYLSRAMGGKAQVDYV CCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCCCCEEEEE TALGDDSFSDAMCRIWADEGIGLDLVQRLPGRLPGLYCIQTDAAGERRFLYWRNEAAVRD EECCCCCCCHHHHEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCHHHHH CFTTPASAPILAALADYDVLYFSGITLAVLGALGREKLIETLIEARQRDARIVFDNNYRP HHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC RLWASVEEARAAYRSVLPHVDLALLTVDDEQALFHFEDCDAVFAAYAQIGTPEVVLKRGA HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHCCCHHHHHHCCC EACLIRCDGEAFEVPAQKVETVVDTTAAGDSFSAAYLASRLSGASPVRAAEAGHRLASQV CEEEEEECCCCEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IQVPGALIPKD HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8157608 [H]