| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459245
Identifier: 77459245
GI number: 77459245
Start: 3459347
End: 3462100
Strand: Direct
Name: 77459245
Synonym: Pfl01_3023
Alternate gene names: NA
Gene position: 3459347-3462100 (Clockwise)
Preceding gene: 77459244
Following gene: 77459247
Centisome position: 53.73
GC content: 60.64
Gene sequence:
>2754_bases GTGCGTACCGGCGATTCGAGCAACCGCACTCCTGCGTGGAAAGCCTGGCGCAACCCATTGCGCCCTCGCGCCACCTTGGC CGATGACGCCGCACTCTATACGCACAACCCCAGCTTCACCGATCACCTGCCTTGGGTCGAGTACCTCGACACCGAGCAAT GTTTTCTGCTCGATGACAATCGTTCGGTGGGCGCGGTGTTCGAGTTACTGCCCATCGGCACCGAAGGGCGCGAACCCGAT TGGCTGATGGCGGCCCGCGATGCCCTTGAGGATGCCCTGCAGGATAGCTTTGACGAGCTGGATCAAGCGCCTTGGGTAGC GCAGTTTTTCTGCCAGGACGACAACGATTTAACCCCCTATCTGACCCGACTCAACGATTATATTCAGGACAGAGCGCGAG GTACGGTGTTCACCGAAGCGTACCTGGAACTTACTCGCCGACATCTGAAGGCCATCGCCAAGCCGGGCGGTCTGTTCGAA GACAACGCAGTCACGCGCCTACCCTGGCGCGGAAACAACCGCCGGGTGCGCTTGGTGGTTTATCGCTGGCTTGAGTCTGA CGACGAGGAGACAGGACTCACCCCGGTGCAATCCCTGCATGAGGCTTGCGAACGTATCGCGGCTTCGTTGCAGGCCTGCG GCGTACAATCGGTACGAGTCGATGGCCGCGGTCTTTATGCCTGGTTAGTGCCCTGGTTCAATCCGGCCCCCCAGCTCACC GATGAAGCGCCCGAGGAGTTCTACCGCCGCGTGGCCTATCCGGAGTCAGGCGACGGTGAATCGCTGGAACTGCCCTTTGA TCATGACTTTGCCGAGCGGCTGTTCTTCAATGAACCGCGTTCGGATGTGCAGCACGGACTCTGGTTTTTTGACGATCAGC CCCACCGGGTCATGGTAGTGGACAAGCTGCGCCGAGCGCCCCTGATTGGTCAACTCACCGGAGAAACCCGCAAGGGCGAC GCGGTGAATGCCCTGTTCGACCAGTTACCCGAGGGCACGGTGGTGAGCCTGACCCTGGTGGCCAAACCACAGGATGTACT CGAAGACCAGTTGAACCGCTTGGCGCGAAAAGCCATCGGTGAAAATCTGGCCTCGACCCAGACCCGCCAAGATGTCGAAG AGGCTCGTGCGATCATCGGTCGCCAGCACAAGCTGTACCGCGGCACGCTGGCGTTCTACGTGCGCGGTCACGATGAACTG CAATTGCACCAGCGCTCGGTCAGCCTGGCTAACGCGCTGCTGGGTGCGGGGCTGCAACCGGTACGTGAAGGCGATGAAGT CGCCGCCTGCAACAGCTACCTGCGTTGGTTACCGATGGCTTACAACCCGGCGCGCGACACGCGCAACTGGTACACCCGCC TGATGTTTGCCCAGCACCTGGCGAATCTGGTTCCGGTGTGGGGCCGCAGCACCGGCACCGGCCACCCGGGCATCACCCTG TTCAATCGGGGTGGTTCGCCGTTGAGTTTTGATCCGTTGTCACGTCTTGACCGGGCCATGAACGGCCATCTGCTGTTGTT CGGCCCGACTGGCGCCGGCAAATCGGCCACCCTGGTCACCCTGCTGATGCAGGTCATGGCTGTGTACCGCCCTCGTCTGT TTATCGTCGAGGCCGGCAACTCATTCGGCTTGCAGGGAGACTACTTCGCGACACAGGGCCTGTCGGTCAACAAGGTCCAA TTGAAACCTGGCGCCTCGGTCAGTCTCGCCCCGTTCGCCGATGCTTGGCGCCTGGTCGAGCAGCCGGATCAGGTGGCGAG TCTATCGATCGATGAGCTGGACGATGAGGTGGTAACCAGTCGCGAAGACCAGCGCGATGTTCTTGGCGAACTGGAAATCA CCGCTCGGCTGATGATCACCGGCGGCGAGGCCAAGGAAGAGGCCCGCCTGAGTCGAGCTGATCGCAGCTTGATTCGCGAG TGCATTCTCGATGCGGCGCAGACCTGTGTCGCAGCGAACCGCCAGGTGCTGACCCGCGACGTGCGCAACGCTTTGCTGCG CGTCGCCGCCGACCTGCACTTACCGGAAAAACGTCGCGAACGTGCCCAGGAGATGGGCGAGTCCATCGACCTGTTTTGCC AGGGTTTCGAAGGGGAACTGTTCGATCGCGAGGGCACGCCTTGGCCCGAGAGCGATGTGACCATTGTCGATCTCGCCACT TACGTTCGCGAAGGCTACGAGGCGCAGATGTCCATCAGCTATATCAGCCTGATGAACACCGTGAACAACCTTGCCGAGCG CGACCAGTATCTGGGCCGACCGATCATCATGGTCACCGACGAGGGCCATATCATCACCAAGAACCCGCTATTGACGCCAT TTGTGGTCAAGGGGACGAAGATGTGGCGCAAGCTCGGCGCTTGGTTCTGGCTCGCCACGCAAAACCTTGCCGATTTTCCC ACGGCGGCGCAGACCATGCTCAACATGATCGAATGGTGGATTTGTTTGAATATGCCGCCCGCGGAGATTGAGGAAATCGC ACGGTTCAAGAAGCTCACGCCGGCGCAGAAAGCCTTGTTGCTCTCCGCCAGTAAGGAGCCGGGGAAGTACACTGAGGGGG TCGTGCTGTCGAAGAAGCTCGAGACACTGTTTCGAGCCGTGCCACCCAGCCTTTACCTCGCCCTGGCCATGACCGAGCCC GAGGAAAAAGCCGAGCGTTGGACGCTGATGCAGGAGAACGGCTGCTCAGAACTGGAAGCGGCGTATAGGGTAGCTGAACG GATCGATAGAGCGCGAGGAATAGAACCCGCATAG
Upstream 100 bases:
>100_bases GTGGTACTGAGCAAGCACCGGTCCCGGGTTACTCGACCGTATTTCCGTTCTACCAACGGGTGCAGTACGCATTACCGGGT GAACGTCAGGAAGACTTGTA
Downstream 100 bases:
>100_bases GGGAATCTATTGAGACCTCTCGCTCTAACGCGAGTGACCGGTTATTGCGGTACGCCCCGGAGCCGCTGCTGAATCCTCAA CAGGAATCCGGCTTCGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 917; Mature: 917
Protein sequence:
>917_residues MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDNRSVGAVFELLPIGTEGREPD WLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPYLTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFE DNAVTRLPWRGNNRRVRLVVYRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVVDKLRRAPLIGQLTGETRKGD AVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIGENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDEL QLHQRSVSLANALLGAGLQPVREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGNSFGLQGDYFATQGLSVNKVQ LKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTSREDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRE CILDAAQTCVAANRQVLTRDVRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTKMWRKLGAWFWLATQNLADFP TAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALLLSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEP EEKAERWTLMQENGCSELEAAYRVAERIDRARGIEPA
Sequences:
>Translated_917_residues MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDNRSVGAVFELLPIGTEGREPD WLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPYLTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFE DNAVTRLPWRGNNRRVRLVVYRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVVDKLRRAPLIGQLTGETRKGD AVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIGENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDEL QLHQRSVSLANALLGAGLQPVREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGNSFGLQGDYFATQGLSVNKVQ LKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTSREDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRE CILDAAQTCVAANRQVLTRDVRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTKMWRKLGAWFWLATQNLADFP TAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALLLSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEP EEKAERWTLMQENGCSELEAAYRVAERIDRARGIEPA >Mature_917_residues MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDNRSVGAVFELLPIGTEGREPD WLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPYLTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFE DNAVTRLPWRGNNRRVRLVVYRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVVDKLRRAPLIGQLTGETRKGD AVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIGENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDEL QLHQRSVSLANALLGAGLQPVREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGNSFGLQGDYFATQGLSVNKVQ LKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTSREDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRE CILDAAQTCVAANRQVLTRDVRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTKMWRKLGAWFWLATQNLADFP TAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALLLSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEP EEKAERWTLMQENGCSELEAAYRVAERIDRARGIEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103402; Mature: 103402
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDN CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEECC RSVGAVFELLPIGTEGREPDWLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPY CCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHH LTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFEDNAVTRLPWRGNNRRVRLVV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEE YRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCC DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVV CCCHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHCCCEEECCCCCEEEEE DKLRRAPLIGQLTGETRKGDAVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIG HHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH ENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDELQLHQRSVSLANALLGAGLQP CHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC VREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGN ECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC SFGLQGDYFATQGLSVNKVQLKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTS CCCCCCCCEEECCCCEEEEEECCCCCEEECCHHHHHHHHCCCHHHHHCCHHHCCHHHHHC REDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRECILDAAQTCVAANRQVLTRD CCHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHEECCCCCEECCCCCCCCCCCEEHHHHHH YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEHHHH MWRKLGAWFWLATQNLADFPTAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALL HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH LSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEPEEKAERWTLMQENGCSELEA HCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHCCCCHHHHH AYRVAERIDRARGIEPA HHHHHHHHHHHCCCCCC >Mature Secondary Structure MRTGDSSNRTPAWKAWRNPLRPRATLADDAALYTHNPSFTDHLPWVEYLDTEQCFLLDDN CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCCCCCEEEEECC RSVGAVFELLPIGTEGREPDWLMAARDALEDALQDSFDELDQAPWVAQFFCQDDNDLTPY CCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHH LTRLNDYIQDRARGTVFTEAYLELTRRHLKAIAKPGGLFEDNAVTRLPWRGNNRRVRLVV HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEEEE YRWLESDDEETGLTPVQSLHEACERIAASLQACGVQSVRVDGRGLYAWLVPWFNPAPQLT EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCCCCC DEAPEEFYRRVAYPESGDGESLELPFDHDFAERLFFNEPRSDVQHGLWFFDDQPHRVMVV CCCHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHCCCEEECCCCCEEEEE DKLRRAPLIGQLTGETRKGDAVNALFDQLPEGTVVSLTLVAKPQDVLEDQLNRLARKAIG HHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHH ENLASTQTRQDVEEARAIIGRQHKLYRGTLAFYVRGHDELQLHQRSVSLANALLGAGLQP CHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC VREGDEVAACNSYLRWLPMAYNPARDTRNWYTRLMFAQHLANLVPVWGRSTGTGHPGITL CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE FNRGGSPLSFDPLSRLDRAMNGHLLLFGPTGAGKSATLVTLLMQVMAVYRPRLFIVEAGN ECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCC SFGLQGDYFATQGLSVNKVQLKPGASVSLAPFADAWRLVEQPDQVASLSIDELDDEVVTS CCCCCCCCEEECCCCEEEEEECCCCCEEECCHHHHHHHHCCCHHHHHCCHHHCCHHHHHC REDQRDVLGELEITARLMITGGEAKEEARLSRADRSLIRECILDAAQTCVAANRQVLTRD CCHHHHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRNALLRVAADLHLPEKRRERAQEMGESIDLFCQGFEGELFDREGTPWPESDVTIVDLAT HHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHEECCCCCEECCCCCCCCCCCEEHHHHHH YVREGYEAQMSISYISLMNTVNNLAERDQYLGRPIIMVTDEGHIITKNPLLTPFVVKGTK HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCEEHHHH MWRKLGAWFWLATQNLADFPTAAQTMLNMIEWWICLNMPPAEIEEIARFKKLTPAQKALL HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH LSASKEPGKYTEGVVLSKKLETLFRAVPPSLYLALAMTEPEEKAERWTLMQENGCSELEA HCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEEEEECCCHHHHHHHHHHHCCCCHHHHH AYRVAERIDRARGIEPA HHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA