| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459225
Identifier: 77459225
GI number: 77459225
Start: 3445343
End: 3445936
Strand: Direct
Name: 77459225
Synonym: Pfl01_3003
Alternate gene names: NA
Gene position: 3445343-3445936 (Clockwise)
Preceding gene: 77459224
Following gene: 77459226
Centisome position: 53.51
GC content: 57.41
Gene sequence:
>594_bases ATGGCCCACGCCAACCAATCCCAAGAAGTGACCACTTACTTCAACCTGCACACCATCGGTATCGGTTACCTCAACCGTGT TCGTGAAGTACAAGTCCGCCGCGGCCAGCCATTCATGGCCTGCGATATCGCAGCCCTGCACGGTGCCACCGATGCGGTGG AGTACACCCGCTTCGACTGCAAAGTCGCTGGGGGCGAAGCTGAACGCTTGATTCGTCTCTATATGGACGCCGTCAAAGCC GAGAAAAAGGTCTTGCTGTCGTTCCGTATCGGCGACCTGTGGATCGATCCGTTTCTCTACGAGAAAGGCGATAAACAAGG TCAACCGGGCGCCAGCCTGAAAGGTCGTTTGCTGTTCATCGACTGGATCAAGGTCAACGGCACATTCGAGTACAAAGCGC CCGCCAGGCAGGAAGCAACACCACCTACTGAGCAAGCGCCAAACAGTGAGCCATCCCCAGCATCGGCAGATGCCGAAGTT GAAGTTGAAGTTGAAGAGTTCGAAAACCCAACGGACGCTCGGGTCGAACCTGAATCTCCACCCACTCCCCGCACGGCCCG CCGTGACCCCACCCGTACCGTTCAGTCCGCCTGA
Upstream 100 bases:
>100_bases GTCGTTCATCGCTCGCCTTCACCTTACCCACCCTGACGGGGACTCACTCCCCCGTCAGGGACTGTGCGTCGCCGTTTTCC CTTGAAACAGGAGAACCACC
Downstream 100 bases:
>100_bases ACAGTCCACGATGTTCCACACCAAGGCGCTCCCTCGAGCGCCTTTTCTTCAATCCGCACAGGAGAACCATCATGGAATCC TTCTGGCTTTGCGACGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAHANQSQEVTTYFNLHTIGIGYLNRVREVQVRRGQPFMACDIAALHGATDAVEYTRFDCKVAGGEAERLIRLYMDAVKA EKKVLLSFRIGDLWIDPFLYEKGDKQGQPGASLKGRLLFIDWIKVNGTFEYKAPARQEATPPTEQAPNSEPSPASADAEV EVEVEEFENPTDARVEPESPPTPRTARRDPTRTVQSA
Sequences:
>Translated_197_residues MAHANQSQEVTTYFNLHTIGIGYLNRVREVQVRRGQPFMACDIAALHGATDAVEYTRFDCKVAGGEAERLIRLYMDAVKA EKKVLLSFRIGDLWIDPFLYEKGDKQGQPGASLKGRLLFIDWIKVNGTFEYKAPARQEATPPTEQAPNSEPSPASADAEV EVEVEEFENPTDARVEPESPPTPRTARRDPTRTVQSA >Mature_196_residues AHANQSQEVTTYFNLHTIGIGYLNRVREVQVRRGQPFMACDIAALHGATDAVEYTRFDCKVAGGEAERLIRLYMDAVKAE KKVLLSFRIGDLWIDPFLYEKGDKQGQPGASLKGRLLFIDWIKVNGTFEYKAPARQEATPPTEQAPNSEPSPASADAEVE VEVEEFENPTDARVEPESPPTPRTARRDPTRTVQSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21979; Mature: 21848
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHANQSQEVTTYFNLHTIGIGYLNRVREVQVRRGQPFMACDIAALHGATDAVEYTRFDC CCCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCEEEEEEE KVAGGEAERLIRLYMDAVKAEKKVLLSFRIGDLWIDPFLYEKGDKQGQPGASLKGRLLFI EECCCHHHHHHHHHHHHHHHHHEEEEEEEECCEEECCHHCCCCCCCCCCCCCCCCEEEEE DWIKVNGTFEYKAPARQEATPPTEQAPNSEPSPASADAEVEVEVEEFENPTDARVEPESP EEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCEECCCCC PTPRTARRDPTRTVQSA CCCCCCCCCCCCCCCCC >Mature Secondary Structure AHANQSQEVTTYFNLHTIGIGYLNRVREVQVRRGQPFMACDIAALHGATDAVEYTRFDC CCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHCCCCEEEEHHHHHCCCCCCCEEEEEEE KVAGGEAERLIRLYMDAVKAEKKVLLSFRIGDLWIDPFLYEKGDKQGQPGASLKGRLLFI EECCCHHHHHHHHHHHHHHHHHEEEEEEEECCEEECCHHCCCCCCCCCCCCCCCCEEEEE DWIKVNGTFEYKAPARQEATPPTEQAPNSEPSPASADAEVEVEVEEFENPTDARVEPESP EEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCEECCCCC PTPRTARRDPTRTVQSA CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA