Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77459206

Identifier: 77459206

GI number: 77459206

Start: 3424074

End: 3424361

Strand: Direct

Name: 77459206

Synonym: Pfl01_2981

Alternate gene names: NA

Gene position: 3424074-3424361 (Clockwise)

Preceding gene: 77459177

Following gene: 77459209

Centisome position: 53.18

GC content: 56.25

Gene sequence:

>288_bases
TTGAAAAAAATCATATTTTCCGCTTGCTTGGTTTTCTTTGCCTGCGCTGAGGCGGCTCAAGAGCCCGAAGCCGTATTCAA
CCGTAGCTGTGTGATGTGCCACAGCGGCCAACTCCCGGCCGCGCCTAAGAAAGGCGATCCATCCGCTTGGCAACCTCGCT
TGGATAAAGGGATGGACGTATTAGTGGCGCATGCTACCGGGGGGTACGGGGCAATGCCTCCGCGCGGCCTCTGCATGGAC
TGCAGCGCCGAAGACTACCGAGCGGTTATTGATTGGATGTCGAAGTAA

Upstream 100 bases:

>100_bases
CGCCTGACGAGTTGTGGAGGACACATGTGTTCAGGAACTGAACACATTCCTGAAGTTTCGACCGTCACGGTAGAGCCTTA
ATACAATTCATAGGTGAATT

Downstream 100 bases:

>100_bases
CCTAGCCTAGCTTTACGGCGCTAAAACGACCCTTCACATTTCTGAGGCCAGCCCTGTCGGCAGGGTGGTGCAGGCGGATG
CGACTGATGACAAGTGCAGC

Product: cytochrome c-type protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDVLVAHATGGYGAMPPRGLCMD
CSAEDYRAVIDWMSK

Sequences:

>Translated_95_residues
MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDVLVAHATGGYGAMPPRGLCMD
CSAEDYRAVIDWMSK
>Mature_95_residues
MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDVLVAHATGGYGAMPPRGLCMD
CSAEDYRAVIDWMSK

Specific function: It is unreactive with cytochrome c reductase or oxidase [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10283; Mature: 10283

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
12.6 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
12.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDV
CCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
LVAHATGGYGAMPPRGLCMDCSAEDYRAVIDWMSK
EEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKIIFSACLVFFACAEAAQEPEAVFNRSCVMCHSGQLPAAPKKGDPSAWQPRLDKGMDV
CCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
LVAHATGGYGAMPPRGLCMDCSAEDYRAVIDWMSK
EEEECCCCCCCCCCCCEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2993632 [H]