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The map label for this gene is yezE [H]

Identifier: 77459180

GI number: 77459180

Start: 3394440

End: 3395021

Strand: Reverse

Name: yezE [H]

Synonym: Pfl01_2955

Alternate gene names: 77459180

Gene position: 3395021-3394440 (Counterclockwise)

Preceding gene: 77459181

Following gene: 77459179

Centisome position: 52.73

GC content: 50.69

Gene sequence:

>582_bases
ATGTCCAGACCGCAGACATTCAATACGCAAGAAGCTTTACACAAGGCAATGGTCGTGTTCTGGCGCAAAGGTTATGAGGC
AACTTCAATAATTGACCTTCTCGGCGCCACGGGGCTGAGCAAAAGCAGTTTGTACGCAACATTTGGCGGCAAGCGCGAGT
TATTTATTATGGCGTTCGACGCCTATCGTCGTGAGCGAGCTAAAGACATGCATAGAGCCTTGCAGGACGGCCCTGCACGC
CTGTCTATCGAGTCGTTCTTCCGTTCTCTTTTTGCTGACCTTAATGACCCAAGTGAATCTCATGGCTGCATGAGCATCAA
TCAAGCTGTAGAGATGGCGGCACATGATCTTGATGTCCGTCAGAGGGTCATGGAGGACTTTCGTCTCATTGAGGAGGCGT
TGGAGAGGGCGATTGAGCGAGGGCAACAAGATGGATCATTGGGTAGTAATCGGAATGCCCGAGAATTGGCCCGTCTGTTG
GTTCTGGCTTTTCCCGGACTGCAGGTCATGGCACGTGCTGGATACACGAAACAAGATTTAGAAAGTGCGCTGCACCTGCT
GCTGTCGAATTTGGATTTGTAA

Upstream 100 bases:

>100_bases
CAGTGGTTTGATGTTGTTCTGGACCGATCGGTCCTTAACGATTAGAGTAGTTCTCCACACAGTCCAATCCGGCTTACGCA
ACGGAGCGCTCGAATCGAAC

Downstream 100 bases:

>100_bases
GAGTCGAAAAATTTTATACGTTTTGGACTGTTCGGTCCAAATCATGGCCTGAGTCAAGGAGAATATCGTGAATGTCACGC
AGATACGTAACGCAACGTTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSRPQTFNTQEALHKAMVVFWRKGYEATSIIDLLGATGLSKSSLYATFGGKRELFIMAFDAYRRERAKDMHRALQDGPAR
LSIESFFRSLFADLNDPSESHGCMSINQAVEMAAHDLDVRQRVMEDFRLIEEALERAIERGQQDGSLGSNRNARELARLL
VLAFPGLQVMARAGYTKQDLESALHLLLSNLDL

Sequences:

>Translated_193_residues
MSRPQTFNTQEALHKAMVVFWRKGYEATSIIDLLGATGLSKSSLYATFGGKRELFIMAFDAYRRERAKDMHRALQDGPAR
LSIESFFRSLFADLNDPSESHGCMSINQAVEMAAHDLDVRQRVMEDFRLIEEALERAIERGQQDGSLGSNRNARELARLL
VLAFPGLQVMARAGYTKQDLESALHLLLSNLDL
>Mature_192_residues
SRPQTFNTQEALHKAMVVFWRKGYEATSIIDLLGATGLSKSSLYATFGGKRELFIMAFDAYRRERAKDMHRALQDGPARL
SIESFFRSLFADLNDPSESHGCMSINQAVEMAAHDLDVRQRVMEDFRLIEEALERAIERGQQDGSLGSNRNARELARLLV
LAFPGLQVMARAGYTKQDLESALHLLLSNLDL

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081833, Length=181, Percent_Identity=28.1767955801105, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21752; Mature: 21621

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPQTFNTQEALHKAMVVFWRKGYEATSIIDLLGATGLSKSSLYATFGGKRELFIMAFD
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHEECCCCEEEEEEHHH
AYRRERAKDMHRALQDGPARLSIESFFRSLFADLNDPSESHGCMSINQAVEMAAHDLDVR
HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
QRVMEDFRLIEEALERAIERGQQDGSLGSNRNARELARLLVLAFPGLQVMARAGYTKQDL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCHHHH
ESALHLLLSNLDL
HHHHHHHHHHCCC
>Mature Secondary Structure 
SRPQTFNTQEALHKAMVVFWRKGYEATSIIDLLGATGLSKSSLYATFGGKRELFIMAFD
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHEECCCCEEEEEEHHH
AYRRERAKDMHRALQDGPARLSIESFFRSLFADLNDPSESHGCMSINQAVEMAAHDLDVR
HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
QRVMEDFRLIEEALERAIERGQQDGSLGSNRNARELARLLVLAFPGLQVMARAGYTKQDL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCHHHH
ESALHLLLSNLDL
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]