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The map label for this gene is ydiF [H]

Identifier: 77459170

GI number: 77459170

Start: 3387095

End: 3388720

Strand: Direct

Name: ydiF [H]

Synonym: Pfl01_2945

Alternate gene names: 77459170

Gene position: 3387095-3388720 (Clockwise)

Preceding gene: 77459169

Following gene: 77459171

Centisome position: 52.61

GC content: 60.46

Gene sequence:

>1626_bases
ATGACTCACGTCTCGCGTACGCCTGCTCTCGTCTCCCTGAATCAACTGGGTTTTCAGTTCGCCAATGGCGAGACGATTTT
CACTGCACTCAATCTGAAATTCGATCACACCCCGACCGCCATTGTCGGGCGCAACGGCGTTGGCAAAAGCATTTTGGCGC
GTCTGATCGCCGGAGTATGGCAACCCACCAGCGGCAGCGTGACGCGTACCGTGGCGACAACCTACGTGGCGCAAACCTTT
GTCGCGACACCCGGCGAGACGGTCGCCGAGTCCACCGGCAGCGCCGCGATTCTTCAGGCGCTGGAGCGAATGAACCGGGG
TTGCGGATCAGTCGAGGATTTCGATCTCATTGGCGAGCAATGGGATCTGGCGGACCGACTGCGCCGCCTGCTCGATGACG
CCGGGCTGACAGAGATTTCTTTCACCGACGAGACTGGCAAACTCAGTGGCGGCCAGCAAGCACGTGTTGCCCTGATTGGG
GCATTGTTGAGTCGTGCGTCGTTACTGATTCTGGATGAACCGACCAACCATCTGGATACATCAGGACGGAAATGGCTGAT
GAACTCATTGGAACGCTGGCACACCGGTTTGATCGTCGTCAGCCATGATCGGCAATTGCTCGACCGGATGCAGCGGATCG
TCGAGTTGAGCGCATCGGGTGCAATAGAATTCGGCGGCAATTACTCGGCATTCCGCGAACATCAGCGAATTCATCAAGCC
GCGGCGCAAGCACGTCTCGACCACGCCAGAAGCGAACGTCAGCGCGAGCGGATTCGGCTACGACGCGAGCACGACACGAT
ACAGCGACACGCTGCCAACTCTCGACGCAACGCCGAAACCGCCAACATTGCCAGTTTCGAATACGTGGCGATCAAGGGCG
CCGCCCGGGAGATCATGGGGCATGTCCGTCGGGGTCATCAGGCCCGCAAGTCCGAACTGGATGCCCAGGTGCGCGAAGCT
TACGCCAAGGTGCAGCCCGAGGACGGCGTGCTGATTAACTTGCCTGCCAGCGCGGTGCCGAACAACCGCCAGATCTGTAC
GTTGATTGACGCTCGGCTGCCCTGGCTGTCGAGCGATGCACTGAATCTGACGATCCATGGCCCGATGCGGATCGCTGTCA
GCGGGCCCAACGGCTGCGGCAAATCAACGCTGTTGAAAGTGCTCGCCGGGGAACTGATGCCCGTCGATGGAACCGCCGCG
ACTCACGTGCCCTTCGCATTCCTGGATCAGCAACTGGCCCAACTAAACGATCAGCGCTCCATTACCGAACAGCTGATGAT
GCAAGGTACTGCACTGACCGAGGGCACCCTGCGCAGCTATCTCGCGCACTTGCAGCTGGATGCGAGCCGCGCCACGGCCC
CTTGCGCTTCGTTGAGCGGTGGCGAGCGCCTGAAAGCCGCACTGGCGCTGGCTTTGTGGCGAACGGATCCTGCGCAGCTG
TTGCTGCTGGATGAGCCGACCAACCATCTGGATCTGCCGTCGGTGGAAGCGTTCGAACGGGCGTTGCAGTCATTTCCGGG
TGCCATTGTCGCCGTTTCCCACGATCAGGACTTCCTTGAGGCATTGAATCCGACCCACCACCTGCGCCGGCACCCATCAG
GCTGGCAACTGCACCCGACGAACTGA

Upstream 100 bases:

>100_bases
GGGATGACCGCAGAAGTGAACAACTAAGCCTTCAAAAATGTAATCGCGACACGCCGCTCATGGCGCTTGTCAGTGTTCAC
GACATTTTTTGGAGGTGCCG

Downstream 100 bases:

>100_bases
CTTGGCTATTTTTTGCACGATTGCTCAGGGCTTCTATAGTTGATCTGGTACGAATCAGCCGCGGTGACGCCATGGAAGAC
ATATTCGTCGTGAAGCGCTG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 540

Protein sequence:

>541_residues
MTHVSRTPALVSLNQLGFQFANGETIFTALNLKFDHTPTAIVGRNGVGKSILARLIAGVWQPTSGSVTRTVATTYVAQTF
VATPGETVAESTGSAAILQALERMNRGCGSVEDFDLIGEQWDLADRLRRLLDDAGLTEISFTDETGKLSGGQQARVALIG
ALLSRASLLILDEPTNHLDTSGRKWLMNSLERWHTGLIVVSHDRQLLDRMQRIVELSASGAIEFGGNYSAFREHQRIHQA
AAQARLDHARSERQRERIRLRREHDTIQRHAANSRRNAETANIASFEYVAIKGAAREIMGHVRRGHQARKSELDAQVREA
YAKVQPEDGVLINLPASAVPNNRQICTLIDARLPWLSSDALNLTIHGPMRIAVSGPNGCGKSTLLKVLAGELMPVDGTAA
THVPFAFLDQQLAQLNDQRSITEQLMMQGTALTEGTLRSYLAHLQLDASRATAPCASLSGGERLKAALALALWRTDPAQL
LLLDEPTNHLDLPSVEAFERALQSFPGAIVAVSHDQDFLEALNPTHHLRRHPSGWQLHPTN

Sequences:

>Translated_541_residues
MTHVSRTPALVSLNQLGFQFANGETIFTALNLKFDHTPTAIVGRNGVGKSILARLIAGVWQPTSGSVTRTVATTYVAQTF
VATPGETVAESTGSAAILQALERMNRGCGSVEDFDLIGEQWDLADRLRRLLDDAGLTEISFTDETGKLSGGQQARVALIG
ALLSRASLLILDEPTNHLDTSGRKWLMNSLERWHTGLIVVSHDRQLLDRMQRIVELSASGAIEFGGNYSAFREHQRIHQA
AAQARLDHARSERQRERIRLRREHDTIQRHAANSRRNAETANIASFEYVAIKGAAREIMGHVRRGHQARKSELDAQVREA
YAKVQPEDGVLINLPASAVPNNRQICTLIDARLPWLSSDALNLTIHGPMRIAVSGPNGCGKSTLLKVLAGELMPVDGTAA
THVPFAFLDQQLAQLNDQRSITEQLMMQGTALTEGTLRSYLAHLQLDASRATAPCASLSGGERLKAALALALWRTDPAQL
LLLDEPTNHLDLPSVEAFERALQSFPGAIVAVSHDQDFLEALNPTHHLRRHPSGWQLHPTN
>Mature_540_residues
THVSRTPALVSLNQLGFQFANGETIFTALNLKFDHTPTAIVGRNGVGKSILARLIAGVWQPTSGSVTRTVATTYVAQTFV
ATPGETVAESTGSAAILQALERMNRGCGSVEDFDLIGEQWDLADRLRRLLDDAGLTEISFTDETGKLSGGQQARVALIGA
LLSRASLLILDEPTNHLDTSGRKWLMNSLERWHTGLIVVSHDRQLLDRMQRIVELSASGAIEFGGNYSAFREHQRIHQAA
AQARLDHARSERQRERIRLRREHDTIQRHAANSRRNAETANIASFEYVAIKGAAREIMGHVRRGHQARKSELDAQVREAY
AKVQPEDGVLINLPASAVPNNRQICTLIDARLPWLSSDALNLTIHGPMRIAVSGPNGCGKSTLLKVLAGELMPVDGTAAT
HVPFAFLDQQLAQLNDQRSITEQLMMQGTALTEGTLRSYLAHLQLDASRATAPCASLSGGERLKAALALALWRTDPAQLL
LLDEPTNHLDLPSVEAFERALQSFPGAIVAVSHDQDFLEALNPTHHLRRHPSGWQLHPTN

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=501, Percent_Identity=29.5409181636727, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI27881506, Length=494, Percent_Identity=27.9352226720648, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI10947137, Length=494, Percent_Identity=27.9352226720648, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI69354671, Length=221, Percent_Identity=31.2217194570136, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI10947135, Length=221, Percent_Identity=31.2217194570136, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1789751, Length=497, Percent_Identity=30.9859154929577, Blast_Score=170, Evalue=2e-43,
Organism=Escherichia coli, GI2367384, Length=533, Percent_Identity=29.2682926829268, Blast_Score=162, Evalue=5e-41,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=28.2945736434109, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1787041, Length=540, Percent_Identity=26.1111111111111, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=31.9148936170213, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17555318, Length=498, Percent_Identity=27.9116465863454, Blast_Score=161, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI17559834, Length=501, Percent_Identity=28.7425149700599, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17553372, Length=510, Percent_Identity=28.6274509803922, Blast_Score=130, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320874, Length=404, Percent_Identity=29.2079207920792, Blast_Score=136, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6321121, Length=554, Percent_Identity=22.9241877256318, Blast_Score=113, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6324314, Length=154, Percent_Identity=34.4155844155844, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323278, Length=200, Percent_Identity=31.5, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6325030, Length=199, Percent_Identity=30.1507537688442, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666836, Length=508, Percent_Identity=27.9527559055118, Blast_Score=157, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24641342, Length=524, Percent_Identity=29.7709923664122, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24642252, Length=506, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI18859989, Length=506, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI45550390, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59239; Mature: 59108

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHVSRTPALVSLNQLGFQFANGETIFTALNLKFDHTPTAIVGRNGVGKSILARLIAGVW
CCCCCCCCHHEEHHHHCEEECCCCEEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHC
QPTSGSVTRTVATTYVAQTFVATPGETVAESTGSAAILQALERMNRGCGSVEDFDLIGEQ
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCCCC
WDLADRLRRLLDDAGLTEISFTDETGKLSGGQQARVALIGALLSRASLLILDEPTNHLDT
CCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC
SGRKWLMNSLERWHTGLIVVSHDRQLLDRMQRIVELSASGAIEFGGNYSAFREHQRIHQA
CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHH
AAQARLDHARSERQRERIRLRREHDTIQRHAANSRRNAETANIASFEYVAIKGAAREIMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHH
HVRRGHQARKSELDAQVREAYAKVQPEDGVLINLPASAVPNNRQICTLIDARLPWLSSDA
HHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
LNLTIHGPMRIAVSGPNGCGKSTLLKVLAGELMPVDGTAATHVPFAFLDQQLAQLNDQRS
EEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHH
ITEQLMMQGTALTEGTLRSYLAHLQLDASRATAPCASLSGGERLKAALALALWRTDPAQL
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
LLLDEPTNHLDLPSVEAFERALQSFPGAIVAVSHDQDFLEALNPTHHLRRHPSGWQLHPT
EEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHHCCCCCCEECCC
N
C
>Mature Secondary Structure 
THVSRTPALVSLNQLGFQFANGETIFTALNLKFDHTPTAIVGRNGVGKSILARLIAGVW
CCCCCCCHHEEHHHHCEEECCCCEEEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHC
QPTSGSVTRTVATTYVAQTFVATPGETVAESTGSAAILQALERMNRGCGSVEDFDLIGEQ
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHCCCC
WDLADRLRRLLDDAGLTEISFTDETGKLSGGQQARVALIGALLSRASLLILDEPTNHLDT
CCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCC
SGRKWLMNSLERWHTGLIVVSHDRQLLDRMQRIVELSASGAIEFGGNYSAFREHQRIHQA
CCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHH
AAQARLDHARSERQRERIRLRREHDTIQRHAANSRRNAETANIASFEYVAIKGAAREIMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHH
HVRRGHQARKSELDAQVREAYAKVQPEDGVLINLPASAVPNNRQICTLIDARLPWLSSDA
HHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCC
LNLTIHGPMRIAVSGPNGCGKSTLLKVLAGELMPVDGTAATHVPFAFLDQQLAQLNDQRS
EEEEEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCHHHH
ITEQLMMQGTALTEGTLRSYLAHLQLDASRATAPCASLSGGERLKAALALALWRTDPAQL
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
LLLDEPTNHLDLPSVEAFERALQSFPGAIVAVSHDQDFLEALNPTHHLRRHPSGWQLHPT
EEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHCCHHHHHHCCCCCCEECCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]