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The map label for this gene is 77459169

Identifier: 77459169

GI number: 77459169

Start: 3385914

End: 3386951

Strand: Direct

Name: 77459169

Synonym: Pfl01_2944

Alternate gene names: NA

Gene position: 3385914-3386951 (Clockwise)

Preceding gene: 77459168

Following gene: 77459170

Centisome position: 52.59

GC content: 61.46

Gene sequence:

>1038_bases
ATGCCCGATACTGCGCTCACCGAGGTATTGCCTTCGGATCTGCATTACGTCGATGACACCCAGCCCGGTATTAGCCGAAA
AAAACTGCGCGGAAAATTTGCCTATTTCAACCCCGAAGGCCAGCGCATCACCGATCCTGACGAGATCAAGCGCATCAACT
CGCTGGCCGTTCCACCGGCCTACATCGACGTGTGGATCTGCGCCGACCCGCGCGGTCATCTGCAAGCCACCGGCCGCGAT
GCCCGTGGGCGCAAGCAATATCGCTATCACGCTCGCTGGCGCGAGGTGCGCGACGCGGACAAGTATTCGCGTCTTCGTGA
ATTTGGTCTGGCGCTGCCCAAACTGCGTAAACAGCTGGAGGCGCTGCTGGCCTCACCGGGCTTCAGTCGCGACAAAGTCA
TGGCGACGGTCATCACGCTGCTCGACGCCACGCTGATCCGCGTCGGCAACACGCAATACGCGCGAGACAATCGCTCCTAC
GGCCTGACCACCCTGCGCAGCCGGCATGTCGAGGTCAACGGCAGCGCGATCCTGTTCCAGTTTCGCGGCAAGAGCGGCAT
CGAACATCAGATTACGGTGAAGGACCGGCGTCTGGCGCGAATCATCAAGCGCTGCCTTGAGATACCGGGGCAGAACCTGT
TTCAGTATCTGGATGAAAACGGCGAGCGGCACAGCGTCAGCTCTTCCGACGTCAACGCCTACCTGCAAAACCTGACCGGT
GCGGACTTCACTGCCAAGGATTACCGGACCTGGGCCGGCAGCGCCCTCGCTTTGGCGGTTCTGCGGGAGCTGCAATGGGA
GTCCGAAACCGAGGCCAAGCGGCATGTGGTCGAGATGGTGAAAGGCGTCGCCCGCCAACTGGGCAACACGCCGGCGGTCT
GTCGAAAGTGCTACATCCACCCGGCGGTGGTCGAGCATTTCATGCTCGGCGCCTTGGCCGAGTTGCCGAAACCGCGCATC
CGCAAGGGCCTGCGCAAGGAAGAAGTCGCACTGGCGCTGTTTCTTGAACGGATGGTCGAGCAGGCAGACACGCCTTGA

Upstream 100 bases:

>100_bases
ATCAAGGCCGTCGCGGTGCTGGCGTAAATCCGCGGGCACGACCGTCATGGCGTGCGGTCAATGGCTTTAACAGCCTGATC
TGCCGCGAAGGAAATCCGCC

Downstream 100 bases:

>100_bases
AGCCTTCGGCCGTCTCGACTAGGCTACGCCTTCCTACCTCCTCGGGATGACCGCAGAAGTGAACAACTAAGCCTTCAAAA
ATGTAATCGCGACACGCCGC

Product: DNA topoisomerase, type I

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MPDTALTEVLPSDLHYVDDTQPGISRKKLRGKFAYFNPEGQRITDPDEIKRINSLAVPPAYIDVWICADPRGHLQATGRD
ARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLEALLASPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSY
GLTTLRSRHVEVNGSAILFQFRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHSVSSSDVNAYLQNLTG
ADFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVARQLGNTPAVCRKCYIHPAVVEHFMLGALAELPKPRI
RKGLRKEEVALALFLERMVEQADTP

Sequences:

>Translated_345_residues
MPDTALTEVLPSDLHYVDDTQPGISRKKLRGKFAYFNPEGQRITDPDEIKRINSLAVPPAYIDVWICADPRGHLQATGRD
ARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLEALLASPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSY
GLTTLRSRHVEVNGSAILFQFRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHSVSSSDVNAYLQNLTG
ADFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVARQLGNTPAVCRKCYIHPAVVEHFMLGALAELPKPRI
RKGLRKEEVALALFLERMVEQADTP
>Mature_344_residues
PDTALTEVLPSDLHYVDDTQPGISRKKLRGKFAYFNPEGQRITDPDEIKRINSLAVPPAYIDVWICADPRGHLQATGRDA
RGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLEALLASPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYG
LTTLRSRHVEVNGSAILFQFRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHSVSSSDVNAYLQNLTGA
DFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVARQLGNTPAVCRKCYIHPAVVEHFMLGALAELPKPRIR
KGLRKEEVALALFLERMVEQADTP

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39219; Mature: 39088

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDTALTEVLPSDLHYVDDTQPGISRKKLRGKFAYFNPEGQRITDPDEIKRINSLAVPPA
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCC
YIDVWICADPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLE
CEEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ALLASPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHCEEEECCCEEEEE
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHSVSSSDVNAYLQNLTG
ECCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
ADFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVARQLGNTPAVCRKCYIH
CCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PAVVEHFMLGALAELPKPRIRKGLRKEEVALALFLERMVEQADTP
HHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDTALTEVLPSDLHYVDDTQPGISRKKLRGKFAYFNPEGQRITDPDEIKRINSLAVPPA
CCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCC
YIDVWICADPRGHLQATGRDARGRKQYRYHARWREVRDADKYSRLREFGLALPKLRKQLE
CEEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
ALLASPGFSRDKVMATVITLLDATLIRVGNTQYARDNRSYGLTTLRSRHVEVNGSAILFQ
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHCEEEECCCEEEEE
FRGKSGIEHQITVKDRRLARIIKRCLEIPGQNLFQYLDENGERHSVSSSDVNAYLQNLTG
ECCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
ADFTAKDYRTWAGSALALAVLRELQWESETEAKRHVVEMVKGVARQLGNTPAVCRKCYIH
CCCCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PAVVEHFMLGALAELPKPRIRKGLRKEEVALALFLERMVEQADTP
HHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA