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The map label for this gene is ycgG [H]

Identifier: 77459145

GI number: 77459145

Start: 3365555

End: 3367090

Strand: Direct

Name: ycgG [H]

Synonym: Pfl01_2920

Alternate gene names: 77459145

Gene position: 3365555-3367090 (Clockwise)

Preceding gene: 77459144

Following gene: 77459146

Centisome position: 52.27

GC content: 58.27

Gene sequence:

>1536_bases
ATGCCACTGACCGTCAGGCCCCGCCGCAAGCGCAGCACCCGGATTATCGTGACATTGCTGTGCGGCTTGCTGCCGATCGT
ACTCGGCAGTGCCATTCTTTATATGCAGGCCGGACGCGCCCTCCAGCAGAGTTCGCAACACACCGCCGAAGAAGCCCTGC
GTCAGTTCGAACTGATGCTCGACAACACTGCCCAGGCCGCCCGCGAACTGTTGCCTTTGGCCGGCCAGACCTGCGAGACC
GTCAAACTGGCCTTGCGCGAACAAGTCACCCGCCGCCCGTTCGTGCGCTCGACCAATCTGGTGTGGGACGACAATCTCTA
TTGCAGCTCCTTGTTCGGCAATTTCAAGGAAGCCGTCAATCCAGGCGACTACGCCCAAGGCAAGTTGTGGCTCATGAACG
GCAACCCGGTGACGCCTGACACCGCGCTGCTGGTGTACCGCCTCAGCGAAGGCCGTGGTGGCGCACTGACCACGCTGGAC
GGCTATCACCTGAGCAACATCCTGCGCCTGATCGGCCGGCACACATTGTTGTTGCTGCAAGTCGGCAACAACTGGCTCTG
CGCCGACGGCAAAGTGCATCAAGGCGCCTTGCCCGCGTTGCCGGTGGCGCAAAGTACCTTGCACTCGTCGCACTATGCGT
TCTCGGTGACAGCCGCTTTTCCAGAAGGCGAAACCTGGCGCTACATGAAAGATGAATACCCGCCGCTGTTCAGCCTGCTG
ATGTTCTTCGGTGCAGTATCGGGAGCAATCGGTTACATCGTGCAAAAACGATCCACGTCGCCCAGCCATGAAATGCTTCG
GGCGCTGGAGGCGGGAGAGTTCATTCCCTACTTTCAACCGGTGGTGCACGGCGACAGTAAACAGTGGTCGGGCACGGAAG
TGCTGATGCGCTGGAACCATCCCAAGGAGGGGCTGGTGCGTCCGGACCTGTTCATCCCGTTTGCCGAACACTCCGGACTG
ATCGTGCCGATGACCCGGGCCTTGATGCAGCAGACGGCTGTCGTGCTGGGGCCGCTGTCATCGACCTATACCGCGCCTTT
CCACATTGGCATCAACATCACCGCCAGCCATTGCAACGATCTGGAGCTGGTTGAGGATTGCCGTGAATTTTTGTCAGCTT
TTCAGCCGGGCAGCATCAGCCTGGTTCTGGAACTCACCGAACGTGAGCTGATCGAGCCGTCCGACATTACCCATCAACTG
TTCGCGCAGCTGCGTGCAATGGGCGTGAAGATCGCGATTGACGACTTTGGCACCGGCCATTCAAGCCTCGGTTACTTGAG
GACGTTCAATGTCGACTTCCTCAAGATCGATCAGACATTTGTCGCCATGATCGATAAAGATGCGCTGTCACGGCATATTC
TGGACAGCATCATCGAGCTCTCGACCAAGCTGGATCTGGGCATCGTGGCCGAAGGTGTGGAGACGCAAGCCCAGTGTGAT
TATCTGGCCGCCCACCATGTCAACTTTCTGCAGGGCTACCTTTTCGGCAAACCGATGCCGGCTGCAGACTTCATCGAAGC
ATTAACTCATCATTAA

Upstream 100 bases:

>100_bases
CAGGCGTCATTGGCCATCTATCATGGGCTCAGACCTCGGGCTTTGCGCGCACGCTTCGCCTGCCATCAAGAGCCCCACTC
CATCGCGACAGGATGCGCCC

Downstream 100 bases:

>100_bases
CTTCTCTGGATAAATCCGGACTCGCCGACAGCCCGCACCAAATTGATACAAAACAGCGTTGTTGTTACATGAAGAAAAAG
TCAGGATTTACTCTTGCCGC

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MPLTVRPRRKRSTRIIVTLLCGLLPIVLGSAILYMQAGRALQQSSQHTAEEALRQFELMLDNTAQAARELLPLAGQTCET
VKLALREQVTRRPFVRSTNLVWDDNLYCSSLFGNFKEAVNPGDYAQGKLWLMNGNPVTPDTALLVYRLSEGRGGALTTLD
GYHLSNILRLIGRHTLLLLQVGNNWLCADGKVHQGALPALPVAQSTLHSSHYAFSVTAAFPEGETWRYMKDEYPPLFSLL
MFFGAVSGAIGYIVQKRSTSPSHEMLRALEAGEFIPYFQPVVHGDSKQWSGTEVLMRWNHPKEGLVRPDLFIPFAEHSGL
IVPMTRALMQQTAVVLGPLSSTYTAPFHIGINITASHCNDLELVEDCREFLSAFQPGSISLVLELTERELIEPSDITHQL
FAQLRAMGVKIAIDDFGTGHSSLGYLRTFNVDFLKIDQTFVAMIDKDALSRHILDSIIELSTKLDLGIVAEGVETQAQCD
YLAAHHVNFLQGYLFGKPMPAADFIEALTHH

Sequences:

>Translated_511_residues
MPLTVRPRRKRSTRIIVTLLCGLLPIVLGSAILYMQAGRALQQSSQHTAEEALRQFELMLDNTAQAARELLPLAGQTCET
VKLALREQVTRRPFVRSTNLVWDDNLYCSSLFGNFKEAVNPGDYAQGKLWLMNGNPVTPDTALLVYRLSEGRGGALTTLD
GYHLSNILRLIGRHTLLLLQVGNNWLCADGKVHQGALPALPVAQSTLHSSHYAFSVTAAFPEGETWRYMKDEYPPLFSLL
MFFGAVSGAIGYIVQKRSTSPSHEMLRALEAGEFIPYFQPVVHGDSKQWSGTEVLMRWNHPKEGLVRPDLFIPFAEHSGL
IVPMTRALMQQTAVVLGPLSSTYTAPFHIGINITASHCNDLELVEDCREFLSAFQPGSISLVLELTERELIEPSDITHQL
FAQLRAMGVKIAIDDFGTGHSSLGYLRTFNVDFLKIDQTFVAMIDKDALSRHILDSIIELSTKLDLGIVAEGVETQAQCD
YLAAHHVNFLQGYLFGKPMPAADFIEALTHH
>Mature_510_residues
PLTVRPRRKRSTRIIVTLLCGLLPIVLGSAILYMQAGRALQQSSQHTAEEALRQFELMLDNTAQAARELLPLAGQTCETV
KLALREQVTRRPFVRSTNLVWDDNLYCSSLFGNFKEAVNPGDYAQGKLWLMNGNPVTPDTALLVYRLSEGRGGALTTLDG
YHLSNILRLIGRHTLLLLQVGNNWLCADGKVHQGALPALPVAQSTLHSSHYAFSVTAAFPEGETWRYMKDEYPPLFSLLM
FFGAVSGAIGYIVQKRSTSPSHEMLRALEAGEFIPYFQPVVHGDSKQWSGTEVLMRWNHPKEGLVRPDLFIPFAEHSGLI
VPMTRALMQQTAVVLGPLSSTYTAPFHIGINITASHCNDLELVEDCREFLSAFQPGSISLVLELTERELIEPSDITHQLF
AQLRAMGVKIAIDDFGTGHSSLGYLRTFNVDFLKIDQTFVAMIDKDALSRHILDSIIELSTKLDLGIVAEGVETQAQCDY
LAAHHVNFLQGYLFGKPMPAADFIEALTHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=499, Percent_Identity=30.8617234468938, Blast_Score=251, Evalue=9e-68,
Organism=Escherichia coli, GI87081980, Length=520, Percent_Identity=32.8846153846154, Blast_Score=234, Evalue=7e-63,
Organism=Escherichia coli, GI1786507, Length=238, Percent_Identity=46.6386554621849, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1788502, Length=506, Percent_Identity=28.4584980237154, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI87081743, Length=256, Percent_Identity=33.203125, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1790496, Length=253, Percent_Identity=32.4110671936759, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1787541, Length=244, Percent_Identity=32.7868852459016, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI226510982, Length=258, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI87081921, Length=229, Percent_Identity=32.3144104803493, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1788849, Length=251, Percent_Identity=28.2868525896414, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI87082096, Length=236, Percent_Identity=28.8135593220339, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787055, Length=235, Percent_Identity=29.3617021276596, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1787410, Length=117, Percent_Identity=32.4786324786325, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 56727; Mature: 56596

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS00134 TRYPSIN_HIS ; PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTVRPRRKRSTRIIVTLLCGLLPIVLGSAILYMQAGRALQQSSQHTAEEALRQFELML
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNTAQAARELLPLAGQTCETVKLALREQVTRRPFVRSTNLVWDDNLYCSSLFGNFKEAVN
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCC
PGDYAQGKLWLMNGNPVTPDTALLVYRLSEGRGGALTTLDGYHLSNILRLIGRHTLLLLQ
CCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHCCCEEEEEE
VGNNWLCADGKVHQGALPALPVAQSTLHSSHYAFSVTAAFPEGETWRYMKDEYPPLFSLL
ECCCEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHH
MFFGAVSGAIGYIVQKRSTSPSHEMLRALEAGEFIPYFQPVVHGDSKQWSGTEVLMRWNH
HHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEECC
PKEGLVRPDLFIPFAEHSGLIVPMTRALMQQTAVVLGPLSSTYTAPFHIGINITASHCND
CCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEEECCCCC
LELVEDCREFLSAFQPGSISLVLELTERELIEPSDITHQLFAQLRAMGVKIAIDDFGTGH
HHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCC
SSLGYLRTFNVDFLKIDQTFVAMIDKDALSRHILDSIIELSTKLDLGIVAEGVETQAQCD
CCCCEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHH
YLAAHHVNFLQGYLFGKPMPAADFIEALTHH
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PLTVRPRRKRSTRIIVTLLCGLLPIVLGSAILYMQAGRALQQSSQHTAEEALRQFELML
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNTAQAARELLPLAGQTCETVKLALREQVTRRPFVRSTNLVWDDNLYCSSLFGNFKEAVN
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHCC
PGDYAQGKLWLMNGNPVTPDTALLVYRLSEGRGGALTTLDGYHLSNILRLIGRHTLLLLQ
CCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHHHHHHHCCCEEEEEE
VGNNWLCADGKVHQGALPALPVAQSTLHSSHYAFSVTAAFPEGETWRYMKDEYPPLFSLL
ECCCEEECCCCCCCCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHH
MFFGAVSGAIGYIVQKRSTSPSHEMLRALEAGEFIPYFQPVVHGDSKQWSGTEVLMRWNH
HHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEECC
PKEGLVRPDLFIPFAEHSGLIVPMTRALMQQTAVVLGPLSSTYTAPFHIGINITASHCND
CCCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEEECCCCC
LELVEDCREFLSAFQPGSISLVLELTERELIEPSDITHQLFAQLRAMGVKIAIDDFGTGH
HHHHHHHHHHHHHCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCC
SSLGYLRTFNVDFLKIDQTFVAMIDKDALSRHILDSIIELSTKLDLGIVAEGVETQAQCD
CCCCEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHH
YLAAHHVNFLQGYLFGKPMPAADFIEALTHH
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]