| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459103
Identifier: 77459103
GI number: 77459103
Start: 3319899
End: 3320378
Strand: Direct
Name: 77459103
Synonym: Pfl01_2878
Alternate gene names: NA
Gene position: 3319899-3320378 (Clockwise)
Preceding gene: 77459102
Following gene: 77459105
Centisome position: 51.56
GC content: 60.42
Gene sequence:
>480_bases ATGTCTACTGCAGCCGAAGTTCGTCCGCCATTGCCGCCGTTCAACCGTGAATCGGCCATTGAAAAAGTTCGTCTGGCCGA GGATGGCTGGAACTCCCGCGACCCGGAGCGCGTGTCGCTGGCCTACACCCTGGACACCAAATGGCGGAACCGCGCCGAAT TCGCCAACAACCGCGAAGAAGCCAAGGGTTTCCTGACCCGCAAATGGGCCAAGGAACTGGATTACCGCCTGATCAAGGAA CTCTGGGCCTACTCCGACACCCGCATCGCCGTGCGCTACGCCTACGAATGGCACGACGACTCGGGCAACTGGTTCCGCTC CTACGGCAACGAAAACTGGGAGTTCGACGAGCACGGCCTGATGTTCCAGCGTTACGCCTGCATCAACGACATGCCGATCA AGGAAAGCGAACGCAAGTTCCACTGGCCGCTGGGCCGGCGCCCGGATGATCATCCGGGGTTGTCGGAACTGGGTCTGTAA
Upstream 100 bases:
>100_bases CCGCCGATAATGCGCAATGCATGGCGCGAAAGTTATTGGACCTGTAACGCCTTAATAAGCCTGACACGTTGTTTAACTGT TAATAGATCGGGAGACAAAC
Downstream 100 bases:
>100_bases TTCAGCAGCCGATCCCTCCTGCTCAGTGTGCAGGAGGGATCTTCAGGCAACTTCGGCAGTCCGGGCCGATTGCGCTTTGG CTTCCAGCTCCCGCACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSTAAEVRPPLPPFNRESAIEKVRLAEDGWNSRDPERVSLAYTLDTKWRNRAEFANNREEAKGFLTRKWAKELDYRLIKE LWAYSDTRIAVRYAYEWHDDSGNWFRSYGNENWEFDEHGLMFQRYACINDMPIKESERKFHWPLGRRPDDHPGLSELGL
Sequences:
>Translated_159_residues MSTAAEVRPPLPPFNRESAIEKVRLAEDGWNSRDPERVSLAYTLDTKWRNRAEFANNREEAKGFLTRKWAKELDYRLIKE LWAYSDTRIAVRYAYEWHDDSGNWFRSYGNENWEFDEHGLMFQRYACINDMPIKESERKFHWPLGRRPDDHPGLSELGL >Mature_158_residues STAAEVRPPLPPFNRESAIEKVRLAEDGWNSRDPERVSLAYTLDTKWRNRAEFANNREEAKGFLTRKWAKELDYRLIKEL WAYSDTRIAVRYAYEWHDDSGNWFRSYGNENWEFDEHGLMFQRYACINDMPIKESERKFHWPLGRRPDDHPGLSELGL
Specific function: Unknown
COG id: COG3558
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18999; Mature: 18868
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAAEVRPPLPPFNRESAIEKVRLAEDGWNSRDPERVSLAYTLDTKWRNRAEFANNREE CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCHHH AKGFLTRKWAKELDYRLIKELWAYSDTRIAVRYAYEWHDDSGNWFRSYGNENWEFDEHGL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHCCCCCCCCCCCCC MFQRYACINDMPIKESERKFHWPLGRRPDDHPGLSELGL HHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCC >Mature Secondary Structure STAAEVRPPLPPFNRESAIEKVRLAEDGWNSRDPERVSLAYTLDTKWRNRAEFANNREE CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHCCHHH AKGFLTRKWAKELDYRLIKELWAYSDTRIAVRYAYEWHDDSGNWFRSYGNENWEFDEHGL HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCHHHHCCCCCCCCCCCCC MFQRYACINDMPIKESERKFHWPLGRRPDDHPGLSELGL HHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA