| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77459074
Identifier: 77459074
GI number: 77459074
Start: 3286693
End: 3288288
Strand: Direct
Name: 77459074
Synonym: Pfl01_2849
Alternate gene names: NA
Gene position: 3286693-3288288 (Clockwise)
Preceding gene: 77459073
Following gene: 77459075
Centisome position: 51.05
GC content: 63.1
Gene sequence:
>1596_bases TTGATCAAGTTGTCCTGTACCATTCGCCGGCAGTCCCTGATCGCAGGGCTGCTTGCATTTGTGCTGTTCATCGCCGGCGT GTACGGGCAGGCGCCTATCGGTTTCGACTCGCGCTTCGTGTTGTTCGCCCAGGAAATGCTGCGCCACGGGCCCAGTGTAT TTCCCACCACCTATGGTGAGCCGTACGCCGATTATTCGGCGCTGTCGACGCTGTTCATCTGGCTGTTGTCGTTGCCGTTC GGCACGGTCAACAGCCTGACAGCGTGGCTGCCGAGCGCGGTTGCCGGCGCGGTGATCGTGACGTTGATGTATCGATTGCT CGCGCCCTCGTCCGTGCGCTGGGCGATCGTCAGCATCGCGTTGCTGATGCTCACCAGCACCTTCATCACCGAAACGCGCG CGGTGTCGCAGGACCTGATGCTCGCCGCCGTGGCGTTTTCGGTGTTCTACCTCGGCTATGCCCACGACCATTTCGCTGCC GGTCGGCGCTGGCCGCTGGTGTTCATTCTGTTGCTGCTGGGGTTCGGTATTCGCGGGCCGATCGGACTGGTGGTGCCGAC CGGCATGCTGTGCAGCTATTACCTGCTGGATCGCCAATGGTCACGCCTGTTGCTCTTCGGGGTGCTGGCTTCGCTGCTGC TGGCGGCCTGCGTCGGGCTGTTGTTGTGGCTGGCGGAGGTCAGCGGCGGGCCGGCGTTTCGTCAGGACGTGATCCGCATG CAGTTCATGGGGCGCATGGACGGCAGCGAAGGCGTCAGCGGTTCGCTGTATTACTTCACCAGCTCCCTGGGCAACTACGC GCTGGCGTATCCGCTGGCCTTGCTCGCGCTGGCGGCGGCATGGCTGAGCAAGCCCAGTCAGCGCGGCCCGGCCTTGCGGC TGGTGCAGTATTGCGCCGCAGCGGGGTTGATCGTGATGCTCGGGCTGTCGATTCCGCAGGCGAAAAAGGCCCGTTACCTG CTGCCGATGCTGCCCATGGCGGCGATCATTGCGGCGTATCCGTTTCAGGTGTTGCACGGCCGGGTGTTTGCCTGGCTGCG CGTCGGCATGCAGGGATTGTGGTTGTTGATTCCCGCACTGTTGATCGTCTTGTTGTGGGTGGCTCAGCGACGGTTTCCCG AGTCGTTGACCGACCTGACGCCGGTAATGATCGTGCTCGGATTGCTGCAACTGGCCGCGTCGTCGCGGTTGTGGCTGCCG CGCTGGCGAACCGAAGTCCTCGCGTTCAGCGCTGTTCTGGCGGTCTGGTCGGCGTACGCGCTGGTGTTCGAGCCGGTGGA GCGCCAGCTGTATGACACGCGATCCTTCAGCCAGGCGGCCATGGTGCGGATCCACGAGCAACCCGCGCCGCTGGTGCTGC ACGGCATGGGCAAGGACGCCAAGGCAATCAAGTTCATGGTCAACGTCGAGCAGGATCTGCAACCGCTGTTCACTGAAACC ACGCAAGCGCTCGAAGCGCTCAAGGCGCCGGCGTGGTTGATGATGGATCGCAGCGACTTCCAGGCCCTGCAAGGCACACC GCTCGGGGCGTTGCAGCCTACATTGAGCGGGCCTTTCGACAAAAACGATTATGTGTTGCTGTGGCTGACGCCTTAA
Upstream 100 bases:
>100_bases GCCTGGCCCGTAACGGCTTCCACTACTTCCCGATGGGCCGTGGCGAATCGCGCACCTTGCCGATTCCGTTGCAGCAATGG CCGCACGCCTCGGACGTGGC
Downstream 100 bases:
>100_bases CCTGCGCGGCGTGATTTCCACAGGGACCGCTGACTGATGACCTTTACCGTGCGACAGGCCCTGGCAGCCGATGCCATCGC CCTTCCCGCCATTGAGCGTT
Product: glycosyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MIKLSCTIRRQSLIAGLLAFVLFIAGVYGQAPIGFDSRFVLFAQEMLRHGPSVFPTTYGEPYADYSALSTLFIWLLSLPF GTVNSLTAWLPSAVAGAVIVTLMYRLLAPSSVRWAIVSIALLMLTSTFITETRAVSQDLMLAAVAFSVFYLGYAHDHFAA GRRWPLVFILLLLGFGIRGPIGLVVPTGMLCSYYLLDRQWSRLLLFGVLASLLLAACVGLLLWLAEVSGGPAFRQDVIRM QFMGRMDGSEGVSGSLYYFTSSLGNYALAYPLALLALAAAWLSKPSQRGPALRLVQYCAAAGLIVMLGLSIPQAKKARYL LPMLPMAAIIAAYPFQVLHGRVFAWLRVGMQGLWLLIPALLIVLLWVAQRRFPESLTDLTPVMIVLGLLQLAASSRLWLP RWRTEVLAFSAVLAVWSAYALVFEPVERQLYDTRSFSQAAMVRIHEQPAPLVLHGMGKDAKAIKFMVNVEQDLQPLFTET TQALEALKAPAWLMMDRSDFQALQGTPLGALQPTLSGPFDKNDYVLLWLTP
Sequences:
>Translated_531_residues MIKLSCTIRRQSLIAGLLAFVLFIAGVYGQAPIGFDSRFVLFAQEMLRHGPSVFPTTYGEPYADYSALSTLFIWLLSLPF GTVNSLTAWLPSAVAGAVIVTLMYRLLAPSSVRWAIVSIALLMLTSTFITETRAVSQDLMLAAVAFSVFYLGYAHDHFAA GRRWPLVFILLLLGFGIRGPIGLVVPTGMLCSYYLLDRQWSRLLLFGVLASLLLAACVGLLLWLAEVSGGPAFRQDVIRM QFMGRMDGSEGVSGSLYYFTSSLGNYALAYPLALLALAAAWLSKPSQRGPALRLVQYCAAAGLIVMLGLSIPQAKKARYL LPMLPMAAIIAAYPFQVLHGRVFAWLRVGMQGLWLLIPALLIVLLWVAQRRFPESLTDLTPVMIVLGLLQLAASSRLWLP RWRTEVLAFSAVLAVWSAYALVFEPVERQLYDTRSFSQAAMVRIHEQPAPLVLHGMGKDAKAIKFMVNVEQDLQPLFTET TQALEALKAPAWLMMDRSDFQALQGTPLGALQPTLSGPFDKNDYVLLWLTP >Mature_531_residues MIKLSCTIRRQSLIAGLLAFVLFIAGVYGQAPIGFDSRFVLFAQEMLRHGPSVFPTTYGEPYADYSALSTLFIWLLSLPF GTVNSLTAWLPSAVAGAVIVTLMYRLLAPSSVRWAIVSIALLMLTSTFITETRAVSQDLMLAAVAFSVFYLGYAHDHFAA GRRWPLVFILLLLGFGIRGPIGLVVPTGMLCSYYLLDRQWSRLLLFGVLASLLLAACVGLLLWLAEVSGGPAFRQDVIRM QFMGRMDGSEGVSGSLYYFTSSLGNYALAYPLALLALAAAWLSKPSQRGPALRLVQYCAAAGLIVMLGLSIPQAKKARYL LPMLPMAAIIAAYPFQVLHGRVFAWLRVGMQGLWLLIPALLIVLLWVAQRRFPESLTDLTPVMIVLGLLQLAASSRLWLP RWRTEVLAFSAVLAVWSAYALVFEPVERQLYDTRSFSQAAMVRIHEQPAPLVLHGMGKDAKAIKFMVNVEQDLQPLFTET TQALEALKAPAWLMMDRSDFQALQGTPLGALQPTLSGPFDKNDYVLLWLTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58531; Mature: 58531
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLSCTIRRQSLIAGLLAFVLFIAGVYGQAPIGFDSRFVLFAQEMLRHGPSVFPTTYGE CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PYADYSALSTLFIWLLSLPFGTVNSLTAWLPSAVAGAVIVTLMYRLLAPSSVRWAIVSIA CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLMLTSTFITETRAVSQDLMLAAVAFSVFYLGYAHDHFAAGRRWPLVFILLLLGFGIRGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC IGLVVPTGMLCSYYLLDRQWSRLLLFGVLASLLLAACVGLLLWLAEVSGGPAFRQDVIRM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QFMGRMDGSEGVSGSLYYFTSSLGNYALAYPLALLALAAAWLSKPSQRGPALRLVQYCAA HHHHCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AGLIVMLGLSIPQAKKARYLLPMLPMAAIIAAYPFQVLHGRVFAWLRVGMQGLWLLIPAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVLLWVAQRRFPESLTDLTPVMIVLGLLQLAASSRLWLPRWRTEVLAFSAVLAVWSAYA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LVFEPVERQLYDTRSFSQAAMVRIHEQPAPLVLHGMGKDAKAIKFMVNVEQDLQPLFTET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHEEECHHHHHHHHHHH TQALEALKAPAWLMMDRSDFQALQGTPLGALQPTLSGPFDKNDYVLLWLTP HHHHHHHCCCHHEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MIKLSCTIRRQSLIAGLLAFVLFIAGVYGQAPIGFDSRFVLFAQEMLRHGPSVFPTTYGE CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PYADYSALSTLFIWLLSLPFGTVNSLTAWLPSAVAGAVIVTLMYRLLAPSSVRWAIVSIA CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LLMLTSTFITETRAVSQDLMLAAVAFSVFYLGYAHDHFAAGRRWPLVFILLLLGFGIRGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC IGLVVPTGMLCSYYLLDRQWSRLLLFGVLASLLLAACVGLLLWLAEVSGGPAFRQDVIRM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH QFMGRMDGSEGVSGSLYYFTSSLGNYALAYPLALLALAAAWLSKPSQRGPALRLVQYCAA HHHHCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AGLIVMLGLSIPQAKKARYLLPMLPMAAIIAAYPFQVLHGRVFAWLRVGMQGLWLLIPAL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVLLWVAQRRFPESLTDLTPVMIVLGLLQLAASSRLWLPRWRTEVLAFSAVLAVWSAYA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LVFEPVERQLYDTRSFSQAAMVRIHEQPAPLVLHGMGKDAKAIKFMVNVEQDLQPLFTET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHEEECHHHHHHHHHHH TQALEALKAPAWLMMDRSDFQALQGTPLGALQPTLSGPFDKNDYVLLWLTP HHHHHHHCCCHHEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA