| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is puuB [H]
Identifier: 77459055
GI number: 77459055
Start: 3263287
End: 3264588
Strand: Direct
Name: puuB [H]
Synonym: Pfl01_2830
Alternate gene names: 77459055
Gene position: 3263287-3264588 (Clockwise)
Preceding gene: 77459054
Following gene: 77459056
Centisome position: 50.68
GC content: 65.13
Gene sequence:
>1302_bases ATGAATCAGTACACCCAGGAACACGCCCAGTCCTATTACGCCGCGTCGGCCCGGGCCAGCACACCCTATCCGGAACTGGC GGGCGACCTGATCGCCGATGTCTGCGTGATCGGCGGCGGGTTCACCGGCGTCAACACGGCCATTGAACTGGCGCAGCGCG GGCTTTCGGTGATTCTGCTCGAAGCCCGGCGCATCGGCTGGGGCGCCAGCGGGCGCAATGGCGGGCAGCTGATTCGCGGG ATCGGCCATGACGTCGAAGGTTTCTCACGGCATGTCGGCAGCGAAGGCGTGCGCTATCTGCACCGGGCCGGGATCGATTC GGTGGAGCTGGTGCGCCAGCGCATCACCGACAACGCCATCGAGTGCGACCTGCGCTGGGGCTTCTGCGAGCTAGCCAACA CCCCGGCGCAGTTCGACGCCTTCAAGGCCGAGCAGGACAGCCTGGCGCAGCTGGGTTACCGCCATGAAACGCGGCTGGTC GCCCCTGAGCTGATTCGTCAGCAAGTTGTGAACGCGGGCGTCTACAAGGGCGGCCTGATCGACAAGGGCTCAGGGCATCT GCACCCGCTCGACCTGGTCCAGGGCGAAGCCCGACTGGCAGCCTCCCTCGGGGTGCGGATTTTCGAGCAGAGCCCGGTGC TGGAAATTCTCCACGGTTCGACCGTTCAAGTCCGCACCCAGAGCGGCACGGTGCGCGCCGGCAGTCTTGTGCTCGGCTGC AACGCGCATCTGGATGAACTTGAACAGCAACTCAGCGGCAAAGTGCTGCCCGCTGGCAGTTACATCATCGCCACTGAACC GCTGTCGGCGGAACGCGCCGCCGAGCTGATTCCGCAGAACCTGGCGCTGTGCGATCAGAAAGTCGGCCTCGACTACTACC GGCTCTCGGCGGACCGGCGCTTGCTGTTCGGCGGCGCCTGCCATTATTCGGGACGGGACCCGGCGGACATCGCCGCGTAC ATGCGACCAAAGATGCTCAAGGTCTTCCCGCAACTGGCGGATGTGCGCATCGACTATCAGTGGGGCGGCAAGATCGGCAT CACCGCCAACCGCTTCCCACAGGTCGGCCGTTTGAAGCAGCACCCGAACGTGTTCTACGCCCAGGGCTATTCCGGTCACG GTCTGAACGTCACCCACTGGTGCGCCAGGCTGCTGGGCGAAGCGATTCATGCCGGCCACAGTCAGGGCATGGACGTGTTC AGCAATGTGCCGCACATGACCTTCCCCGGCGGCCCGGCGCTGCGCTCGCCACTGCTGGCACTGGGTATGTTCTGGTATCG CCTGCGGGAGCTGCTGGGATGA
Upstream 100 bases:
>100_bases CGTCTCAGGAAGTCCTCGACAAGCTCTACATCTCCTCTACCCCGCCCCAGTCGATCATGCGTCTGATGACCCGGTCCTGG AGCAAAGTGAAGTCGAACAA
Downstream 100 bases:
>100_bases CGCTTCGCGGTTAAAGCATCCTGCACATTTGCTCTATCGCGAAGCACTTCTATATTGATGAAGTGCTTTTGCGTTCCTGA CGCTCAGTGCCCACACACCC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MNQYTQEHAQSYYAASARASTPYPELAGDLIADVCVIGGGFTGVNTAIELAQRGLSVILLEARRIGWGASGRNGGQLIRG IGHDVEGFSRHVGSEGVRYLHRAGIDSVELVRQRITDNAIECDLRWGFCELANTPAQFDAFKAEQDSLAQLGYRHETRLV APELIRQQVVNAGVYKGGLIDKGSGHLHPLDLVQGEARLAASLGVRIFEQSPVLEILHGSTVQVRTQSGTVRAGSLVLGC NAHLDELEQQLSGKVLPAGSYIIATEPLSAERAAELIPQNLALCDQKVGLDYYRLSADRRLLFGGACHYSGRDPADIAAY MRPKMLKVFPQLADVRIDYQWGGKIGITANRFPQVGRLKQHPNVFYAQGYSGHGLNVTHWCARLLGEAIHAGHSQGMDVF SNVPHMTFPGGPALRSPLLALGMFWYRLRELLG
Sequences:
>Translated_433_residues MNQYTQEHAQSYYAASARASTPYPELAGDLIADVCVIGGGFTGVNTAIELAQRGLSVILLEARRIGWGASGRNGGQLIRG IGHDVEGFSRHVGSEGVRYLHRAGIDSVELVRQRITDNAIECDLRWGFCELANTPAQFDAFKAEQDSLAQLGYRHETRLV APELIRQQVVNAGVYKGGLIDKGSGHLHPLDLVQGEARLAASLGVRIFEQSPVLEILHGSTVQVRTQSGTVRAGSLVLGC NAHLDELEQQLSGKVLPAGSYIIATEPLSAERAAELIPQNLALCDQKVGLDYYRLSADRRLLFGGACHYSGRDPADIAAY MRPKMLKVFPQLADVRIDYQWGGKIGITANRFPQVGRLKQHPNVFYAQGYSGHGLNVTHWCARLLGEAIHAGHSQGMDVF SNVPHMTFPGGPALRSPLLALGMFWYRLRELLG >Mature_433_residues MNQYTQEHAQSYYAASARASTPYPELAGDLIADVCVIGGGFTGVNTAIELAQRGLSVILLEARRIGWGASGRNGGQLIRG IGHDVEGFSRHVGSEGVRYLHRAGIDSVELVRQRITDNAIECDLRWGFCELANTPAQFDAFKAEQDSLAQLGYRHETRLV APELIRQQVVNAGVYKGGLIDKGSGHLHPLDLVQGEARLAASLGVRIFEQSPVLEILHGSTVQVRTQSGTVRAGSLVLGC NAHLDELEQQLSGKVLPAGSYIIATEPLSAERAAELIPQNLALCDQKVGLDYYRLSADRRLLFGGACHYSGRDPADIAAY MRPKMLKVFPQLADVRIDYQWGGKIGITANRFPQVGRLKQHPNVFYAQGYSGHGLNVTHWCARLLGEAIHAGHSQGMDVF SNVPHMTFPGGPALRSPLLALGMFWYRLRELLG
Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=428, Percent_Identity=41.8224299065421, Blast_Score=341, Evalue=4e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 47184; Mature: 47184
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQYTQEHAQSYYAASARASTPYPELAGDLIADVCVIGGGFTGVNTAIELAQRGLSVILL CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE EARRIGWGASGRNGGQLIRGIGHDVEGFSRHVGSEGVRYLHRAGIDSVELVRQRITDNAI EHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCE ECDLRWGFCELANTPAQFDAFKAEQDSLAQLGYRHETRLVAPELIRQQVVNAGVYKGGLI EEEEECCHHHHCCCCHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE DKGSGHLHPLDLVQGEARLAASLGVRIFEQSPVLEILHGSTVQVRTQSGTVRAGSLVLGC ECCCCCCCHHHHHCCHHHHHHHHCEEEECCCCHHHHHCCCEEEEEECCCCEEECCEEEEC NAHLDELEQQLSGKVLPAGSYIIATEPLSAERAAELIPQNLALCDQKVGLDYYRLSADRR CCCHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCE LLFGGACHYSGRDPADIAAYMRPKMLKVFPQLADVRIDYQWGGKIGITANRFPQVGRLKQ EEEECEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCCCCCCCHHC HPNVFYAQGYSGHGLNVTHWCARLLGEAIHAGHSQGMDVFSNVPHMTFPGGPALRSPLLA CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHH LGMFWYRLRELLG HHHHHHHHHHHHC >Mature Secondary Structure MNQYTQEHAQSYYAASARASTPYPELAGDLIADVCVIGGGFTGVNTAIELAQRGLSVILL CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE EARRIGWGASGRNGGQLIRGIGHDVEGFSRHVGSEGVRYLHRAGIDSVELVRQRITDNAI EHHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHCCCCE ECDLRWGFCELANTPAQFDAFKAEQDSLAQLGYRHETRLVAPELIRQQVVNAGVYKGGLI EEEEECCHHHHCCCCHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCE DKGSGHLHPLDLVQGEARLAASLGVRIFEQSPVLEILHGSTVQVRTQSGTVRAGSLVLGC ECCCCCCCHHHHHCCHHHHHHHHCEEEECCCCHHHHHCCCEEEEEECCCCEEECCEEEEC NAHLDELEQQLSGKVLPAGSYIIATEPLSAERAAELIPQNLALCDQKVGLDYYRLSADRR CCCHHHHHHHHCCCEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCE LLFGGACHYSGRDPADIAAYMRPKMLKVFPQLADVRIDYQWGGKIGITANRFPQVGRLKQ EEEECEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEECCCCCCCCCCCHHC HPNVFYAQGYSGHGLNVTHWCARLLGEAIHAGHSQGMDVFSNVPHMTFPGGPALRSPLLA CCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHH LGMFWYRLRELLG HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1840553; 7984428 [H]