| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is gufA [H]
Identifier: 77459012
GI number: 77459012
Start: 3213087
End: 3214016
Strand: Reverse
Name: gufA [H]
Synonym: Pfl01_2787
Alternate gene names: 77459012
Gene position: 3214016-3213087 (Counterclockwise)
Preceding gene: 77459013
Following gene: 77459011
Centisome position: 49.92
GC content: 58.6
Gene sequence:
>930_bases ATGTCCGAGCCGTTGACCTCATCTGGCGCAACACTTCGCTCACGGTTTGTTCGACTCTCAAAATCCGGATGGGGCGGGTT AGCCTTCTGGTCAATTCTGATTGGCGTGACGCTTTGCTTGCTGATCAGCGGGTACGGCGCCTTCGTCGGCGCCAACAAAC AAAATCTGCACTTTGCATTTCTCGGCGGCATGTCAGGCTTCGCTGCCACGGCCATAGGTGCGTTGGCAGCGATTGCGTTA CGCGATATCGCCGCCAGAACGCAGGACATCATGCTCGGCTTCGCTGCCGGGATGATGCTGGCCGCCAGTTCGTTTTCGCT CATTCTTCCGGGCATCGAAGCCGCCCAGGCGCTGTACGGTAACCAGTTGCTCGCAGCCTGTGTCGTCGTTGCAGGATTGG GATTGGGGGTAGCGCTGATGATCGGTCTGGATCGCTTCGTGCCTCACGAACATGAGAAAAGCGGTCGCCGTGGGCCCGAG GCGCAGCGCATCAATCGTGTATGGCTGTTTGTCCTGGCAATCACGCTGCATAACTTGCCGGAGGGGATGGCCATTGGAGT GAGCTTTGCCAATGGCGATATGAAGGTGGGATTGCCGCTAACCACTGCCATCGCCATTCAAGACATTCCCGAAGGCCTGG CTGTGGCGCTTGCGTTACGCGTGACCGGGATTTCAGCGCTTCGCGCTGCGCTTATTGCGGTGGGCTCAGGGTTGATGGAG CCCATTGGCGCGATCGTCGGCTTGGGGGTTTCGAGCAGCTTCGCATTGGGATATCCCATAGCGCTCGGTCTGGCGGCGGG CGCGATGATTTTTGTGGTGTCCCATGAGGTCATTCCCGAGACCCATCGCAACGGTCATGAGACACCTGCGACCTTGGGGT TGATGCTCGGTTTCGGGGTCATGATGTTTCTCGACACGGCTTTGGGTTGA
Upstream 100 bases:
>100_bases GACCTGGGGGCGGGTGTGCAAGGCGAACCACAACCTTAACGACGCGACCGCACGCCAAAAGGCGTGCGGTTTTTCCATCT CAAGAAAACAGGAGGGTGCG
Downstream 100 bases:
>100_bases CCCTTTACCTCCCATCCATCATTGGACGGCGTGGTTGAAGAAACTGGAAGCAAAAATCCGACGGTAGGCGTCGCGATCCC ACCTGCACTGCCTTTCAATT
Product: Zinc transporter ZIP
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSEPLTSSGATLRSRFVRLSKSGWGGLAFWSILIGVTLCLLISGYGAFVGANKQNLHFAFLGGMSGFAATAIGALAAIAL RDIAARTQDIMLGFAAGMMLAASSFSLILPGIEAAQALYGNQLLAACVVVAGLGLGVALMIGLDRFVPHEHEKSGRRGPE AQRINRVWLFVLAITLHNLPEGMAIGVSFANGDMKVGLPLTTAIAIQDIPEGLAVALALRVTGISALRAALIAVGSGLME PIGAIVGLGVSSSFALGYPIALGLAAGAMIFVVSHEVIPETHRNGHETPATLGLMLGFGVMMFLDTALG
Sequences:
>Translated_309_residues MSEPLTSSGATLRSRFVRLSKSGWGGLAFWSILIGVTLCLLISGYGAFVGANKQNLHFAFLGGMSGFAATAIGALAAIAL RDIAARTQDIMLGFAAGMMLAASSFSLILPGIEAAQALYGNQLLAACVVVAGLGLGVALMIGLDRFVPHEHEKSGRRGPE AQRINRVWLFVLAITLHNLPEGMAIGVSFANGDMKVGLPLTTAIAIQDIPEGLAVALALRVTGISALRAALIAVGSGLME PIGAIVGLGVSSSFALGYPIALGLAAGAMIFVVSHEVIPETHRNGHETPATLGLMLGFGVMMFLDTALG >Mature_308_residues SEPLTSSGATLRSRFVRLSKSGWGGLAFWSILIGVTLCLLISGYGAFVGANKQNLHFAFLGGMSGFAATAIGALAAIALR DIAARTQDIMLGFAAGMMLAASSFSLILPGIEAAQALYGNQLLAACVVVAGLGLGVALMIGLDRFVPHEHEKSGRRGPEA QRINRVWLFVLAITLHNLPEGMAIGVSFANGDMKVGLPLTTAIAIQDIPEGLAVALALRVTGISALRAALIAVGSGLMEP IGAIVGLGVSSSFALGYPIALGLAAGAMIFVVSHEVIPETHRNGHETPATLGLMLGFGVMMFLDTALG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577422, Length=160, Percent_Identity=41.25, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI229577418, Length=160, Percent_Identity=41.25, Blast_Score=102, Evalue=6e-22, Organism=Escherichia coli, GI1789419, Length=247, Percent_Identity=33.1983805668016, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17507805, Length=317, Percent_Identity=33.7539432176656, Blast_Score=136, Evalue=1e-32, Organism=Drosophila melanogaster, GI24652846, Length=175, Percent_Identity=41.7142857142857, Blast_Score=115, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 31764; Mature: 31633
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLTSSGATLRSRFVRLSKSGWGGLAFWSILIGVTLCLLISGYGAFVGANKQNLHFAF CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEE LGGMSGFAATAIGALAAIALRDIAARTQDIMLGFAAGMMLAASSFSLILPGIEAAQALYG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHH NQLLAACVVVAGLGLGVALMIGLDRFVPHEHEKSGRRGPEAQRINRVWLFVLAITLHNLP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC EGMAIGVSFANGDMKVGLPLTTAIAIQDIPEGLAVALALRVTGISALRAALIAVGSGLME CCEEEEEEEECCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH PIGAIVGLGVSSSFALGYPIALGLAAGAMIFVVSHEVIPETHRNGHETPATLGLMLGFGV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCHHHHHHHHHHHH MMFLDTALG HHHHHHHCC >Mature Secondary Structure SEPLTSSGATLRSRFVRLSKSGWGGLAFWSILIGVTLCLLISGYGAFVGANKQNLHFAF CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHEECCCCCCEEEEE LGGMSGFAATAIGALAAIALRDIAARTQDIMLGFAAGMMLAASSFSLILPGIEAAQALYG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHH NQLLAACVVVAGLGLGVALMIGLDRFVPHEHEKSGRRGPEAQRINRVWLFVLAITLHNLP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC EGMAIGVSFANGDMKVGLPLTTAIAIQDIPEGLAVALALRVTGISALRAALIAVGSGLME CCEEEEEEEECCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH PIGAIVGLGVSSSFALGYPIALGLAAGAMIFVVSHEVIPETHRNGHETPATLGLMLGFGV HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCHHHHHHHHHHHH MMFLDTALG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]