| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458976
Identifier: 77458976
GI number: 77458976
Start: 3172437
End: 3173861
Strand: Reverse
Name: 77458976
Synonym: Pfl01_2751
Alternate gene names: NA
Gene position: 3173861-3172437 (Counterclockwise)
Preceding gene: 77458978
Following gene: 77458975
Centisome position: 49.3
GC content: 57.19
Gene sequence:
>1425_bases ATGAACACAGTGATTGAGCGCCCCAATAACAATGTTTCTAAAGGCGTCGTACGCAGATGTTTGATCGCGGCCGTCGCCGC ATCAACCTTCATCTGCACGGCGCAGGCGGCAGATAAGGATCCTGCATTGCTCGGCACAAAACTGACCCCGCTGGGAGGTG AGGCGGCGGCCAGCGCCGATGGTGTCATTCCTGCCTGGACACCACCCGGACCACAAGGTGGCGGTTGGAGCCACGGCCAG GTGCGAGGTCAGCAGTGGAAGTTCAAGGATGACAAACCGCTGTTCAGTATCGACTCAGGCAACGTCGCGAAGTACACCGG CAAGCTTTCCCCTGGCCAAGTGGAAATGTTCAAGAAGATACCGGGGTACCGGATGGATGTGTATCCGACACGGCGCAGCT GTGGCGTACCGGATTTCGTCGCGGAAAACACGAAGAAGAATGTCGGTTTCGCGAAACTCGACGGCGACGGTCTGGCACTG CAGGAGGCTTACGTCCCCGGTATCCCATTTCCGTTTCCAACCTCGGGTGCCGAGGTTATGTGGAACATGAAAATGCGTTA TCGCGGTGTCGGCTTCGATATGTCGAAAACCGTTTCCGGAATTTCGCCGCGAAAAGGGAGTGAAGACTGGCTGCGAACCT CCACTGACTGGTTCATGTACACACCATGGGGCGTGAAGGGCAGTGCGTTGTTTTCTTCATTCGATCGACTCGAAGTTGCG ACCTACTTCAGCTACTCCGACCCCGCAGCCCTTGCCGGGCAGGCCGGCGTGGTGACGACCAAAGCTGGCGAGCAAGCCAC TACGTTCTATTACTTCCCGGGCCAGCGCCGGGTACGTCGCATGCCGGCGTACTCCTACGACGCACCGCAAATCGGTCTGG ACAATCAGTACACCATTGATGAGTCCAACGTGTTCTTTGGCCCGATGGATCGCTTCGACTGGAAGTTGGTCGGCAAGCAG GAAATGCTTGTGCCCTACAACTCGTTCGGCGCCTACGACAACTCGGCGAAGATTGAGGATGTGGCCAAGCGCGACTTCAT CGCCCCCGAATCGCGTCGCTATGAGTTGCACCGCGTCTGGGTGGTTGAAGCAACCGTTCGCCAGGGCATGCGTCATCAGG CTCCGAAACGTCTGTTTTACATCGATGAGGACAGCTGGAACGCGCTGATGGCGGTGGACTACGACAAACAAGGGCAAATC TGGAAAGTCCGCGAAGGCTACACAATCCCGGTCTACGAGACTGGCACCTGCGATATGGAAGCCCAGGCGCAATACAACCT CGTTGATGGTCGCTACCTCTACGACATGACCTCCATTGGTACCGGCAAGAACGACCATCGCTGGCTCACCGATAGCGCCA ACAACCCTCGTTTGAAACGCGACTTCTACACCTCAGACAATCTGCGCGCCACCAGCGAACGCTAA
Upstream 100 bases:
>100_bases TTGGTCAATTGATCAAGTCAGTTGATTAGGTTAGCGCAGGCAACGTGTTACTGCCGTCAAAGTGGCCACGGTGCCGATCA AGACCCACGAGGATCCTCCA
Downstream 100 bases:
>100_bases CAGCGGCTTTCGGGAACAGACATGAAAAAAATAATCAGTAAAACCTCAGGTCTTGTCATCGCGTGTGCAACCCCATTTGC CATGGCGTTCACTTTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MNTVIERPNNNVSKGVVRRCLIAAVAASTFICTAQAADKDPALLGTKLTPLGGEAAASADGVIPAWTPPGPQGGGWSHGQ VRGQQWKFKDDKPLFSIDSGNVAKYTGKLSPGQVEMFKKIPGYRMDVYPTRRSCGVPDFVAENTKKNVGFAKLDGDGLAL QEAYVPGIPFPFPTSGAEVMWNMKMRYRGVGFDMSKTVSGISPRKGSEDWLRTSTDWFMYTPWGVKGSALFSSFDRLEVA TYFSYSDPAALAGQAGVVTTKAGEQATTFYYFPGQRRVRRMPAYSYDAPQIGLDNQYTIDESNVFFGPMDRFDWKLVGKQ EMLVPYNSFGAYDNSAKIEDVAKRDFIAPESRRYELHRVWVVEATVRQGMRHQAPKRLFYIDEDSWNALMAVDYDKQGQI WKVREGYTIPVYETGTCDMEAQAQYNLVDGRYLYDMTSIGTGKNDHRWLTDSANNPRLKRDFYTSDNLRATSER
Sequences:
>Translated_474_residues MNTVIERPNNNVSKGVVRRCLIAAVAASTFICTAQAADKDPALLGTKLTPLGGEAAASADGVIPAWTPPGPQGGGWSHGQ VRGQQWKFKDDKPLFSIDSGNVAKYTGKLSPGQVEMFKKIPGYRMDVYPTRRSCGVPDFVAENTKKNVGFAKLDGDGLAL QEAYVPGIPFPFPTSGAEVMWNMKMRYRGVGFDMSKTVSGISPRKGSEDWLRTSTDWFMYTPWGVKGSALFSSFDRLEVA TYFSYSDPAALAGQAGVVTTKAGEQATTFYYFPGQRRVRRMPAYSYDAPQIGLDNQYTIDESNVFFGPMDRFDWKLVGKQ EMLVPYNSFGAYDNSAKIEDVAKRDFIAPESRRYELHRVWVVEATVRQGMRHQAPKRLFYIDEDSWNALMAVDYDKQGQI WKVREGYTIPVYETGTCDMEAQAQYNLVDGRYLYDMTSIGTGKNDHRWLTDSANNPRLKRDFYTSDNLRATSER >Mature_474_residues MNTVIERPNNNVSKGVVRRCLIAAVAASTFICTAQAADKDPALLGTKLTPLGGEAAASADGVIPAWTPPGPQGGGWSHGQ VRGQQWKFKDDKPLFSIDSGNVAKYTGKLSPGQVEMFKKIPGYRMDVYPTRRSCGVPDFVAENTKKNVGFAKLDGDGLAL QEAYVPGIPFPFPTSGAEVMWNMKMRYRGVGFDMSKTVSGISPRKGSEDWLRTSTDWFMYTPWGVKGSALFSSFDRLEVA TYFSYSDPAALAGQAGVVTTKAGEQATTFYYFPGQRRVRRMPAYSYDAPQIGLDNQYTIDESNVFFGPMDRFDWKLVGKQ EMLVPYNSFGAYDNSAKIEDVAKRDFIAPESRRYELHRVWVVEATVRQGMRHQAPKRLFYIDEDSWNALMAVDYDKQGQI WKVREGYTIPVYETGTCDMEAQAQYNLVDGRYLYDMTSIGTGKNDHRWLTDSANNPRLKRDFYTSDNLRATSER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010752 [H]
Pfam domain/function: PF07044 DUF1329 [H]
EC number: NA
Molecular weight: Translated: 53119; Mature: 53119
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVIERPNNNVSKGVVRRCLIAAVAASTFICTAQAADKDPALLGTKLTPLGGEAAASAD CCCCEECCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEECEEECCCCCCCCCCCC GVIPAWTPPGPQGGGWSHGQVRGQQWKFKDDKPLFSIDSGNVAKYTGKLSPGQVEMFKKI CEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHC PGYRMDVYPTRRSCGVPDFVAENTKKNVGFAKLDGDGLALQEAYVPGIPFPFPTSGAEVM CCCEEEEECCHHCCCCCHHHHCCCCCCCCEEEECCCCEEEEHHCCCCCCCCCCCCCCEEE WNMKMRYRGVGFDMSKTVSGISPRKGSEDWLRTSTDWFMYTPWGVKGSALFSSFDRLEVA EEEEEEEEECCCCHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHHHCCEEEE TYFSYSDPAALAGQAGVVTTKAGEQATTFYYFPGQRRVRRMPAYSYDAPQIGLDNQYTID EEECCCCCHHHCCCCCEEEECCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCCEEEEC ESNVFFGPMDRFDWKLVGKQEMLVPYNSFGAYDNSAKIEDVAKRDFIAPESRRYELHRVW CCCEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEE VVEATVRQGMRHQAPKRLFYIDEDSWNALMAVDYDKQGQIWKVREGYTIPVYETGTCDME EEEHHHHCCHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCEEEEEECCCCCEE AQAQYNLVDGRYLYDMTSIGTGKNDHRWLTDSANNPRLKRDFYTSDNLRATSER CCCEEEEECCEEEEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCCEECCCC >Mature Secondary Structure MNTVIERPNNNVSKGVVRRCLIAAVAASTFICTAQAADKDPALLGTKLTPLGGEAAASAD CCCCEECCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEECEEECCCCCCCCCCCC GVIPAWTPPGPQGGGWSHGQVRGQQWKFKDDKPLFSIDSGNVAKYTGKLSPGQVEMFKKI CEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCEEEEECCCCCCHHHHHHHC PGYRMDVYPTRRSCGVPDFVAENTKKNVGFAKLDGDGLALQEAYVPGIPFPFPTSGAEVM CCCEEEEECCHHCCCCCHHHHCCCCCCCCEEEECCCCEEEEHHCCCCCCCCCCCCCCEEE WNMKMRYRGVGFDMSKTVSGISPRKGSEDWLRTSTDWFMYTPWGVKGSALFSSFDRLEVA EEEEEEEEECCCCHHHHHCCCCCCCCCHHHHCCCCCEEEECCCCCCHHHHHHHHCCEEEE TYFSYSDPAALAGQAGVVTTKAGEQATTFYYFPGQRRVRRMPAYSYDAPQIGLDNQYTID EEECCCCCHHHCCCCCEEEECCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCCCEEEEC ESNVFFGPMDRFDWKLVGKQEMLVPYNSFGAYDNSAKIEDVAKRDFIAPESRRYELHRVW CCCEEECCCCCCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEE VVEATVRQGMRHQAPKRLFYIDEDSWNALMAVDYDKQGQIWKVREGYTIPVYETGTCDME EEEHHHHCCHHHCCCCEEEEEECCCCCEEEEEEECCCCCEEEECCCCEEEEEECCCCCEE AQAQYNLVDGRYLYDMTSIGTGKNDHRWLTDSANNPRLKRDFYTSDNLRATSER CCCEEEEECCEEEEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]