| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458958
Identifier: 77458958
GI number: 77458958
Start: 3150968
End: 3151483
Strand: Reverse
Name: 77458958
Synonym: Pfl01_2733
Alternate gene names: NA
Gene position: 3151483-3150968 (Counterclockwise)
Preceding gene: 77458959
Following gene: 77458953
Centisome position: 48.95
GC content: 52.52
Gene sequence:
>516_bases ATGAATCCGAGTCAGATCAGTGCGTCGAACCTGATTGCATCACTGGACCTTGAACCTCATGTTGAGGGCGGCTATTTCCG CAGGACATACCAGGCTGATCACCGGGACATGCTTGAAACCACGAGCGGCTCACGCTTTCTGATGACGTCGATTTACTACC TGCTGACCGAAGATTCACCGGTCGGCCAGTTTCATTTCAACCATTCGGACATCCTGCATTATTTCCATCTGGGCGATGCC ATTGAGTACAGCTTGATCCTTGAAGACGGTTCACTGCAGACGTTGGTGATGGGCAGCGATGTTCTAGCCGGACAACATTT GCAATTGCACGTACCGGGCGGAATCTGGAAAGCCTCCAGACTGCTGAATGGCGAGAACGGATTTGGTTTGATCAGCGAAG CGGTTTCACCAGGATTCGATTTCGCGGATATGGAAATGGGGAACCGGCAGAAACTCACAGCGCGGTATCCGCAGCATCGA GCGCTGATTGAAAAGCTGACGCGTGCCGAGGATTGA
Upstream 100 bases:
>100_bases CAGAGAGGAAGCATGCTTCAGCTTTAATAGAAACTAACTCGACTAAATGACCGTTTAGTCGAGTTATTACAGAATGTATT GAAAATCAATGGAGCAGGCC
Downstream 100 bases:
>100_bases GAGCGGCACATTTTAAATAGAGGGATCTACAGCCAACAAAGATCAGGTCGTTTGAAAGCGATGCTGGAGATCGAAATGGC GTGCGCAACCGGGCTGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNPSQISASNLIASLDLEPHVEGGYFRRTYQADHRDMLETTSGSRFLMTSIYYLLTEDSPVGQFHFNHSDILHYFHLGDA IEYSLILEDGSLQTLVMGSDVLAGQHLQLHVPGGIWKASRLLNGENGFGLISEAVSPGFDFADMEMGNRQKLTARYPQHR ALIEKLTRAED
Sequences:
>Translated_171_residues MNPSQISASNLIASLDLEPHVEGGYFRRTYQADHRDMLETTSGSRFLMTSIYYLLTEDSPVGQFHFNHSDILHYFHLGDA IEYSLILEDGSLQTLVMGSDVLAGQHLQLHVPGGIWKASRLLNGENGFGLISEAVSPGFDFADMEMGNRQKLTARYPQHR ALIEKLTRAED >Mature_171_residues MNPSQISASNLIASLDLEPHVEGGYFRRTYQADHRDMLETTSGSRFLMTSIYYLLTEDSPVGQFHFNHSDILHYFHLGDA IEYSLILEDGSLQTLVMGSDVLAGQHLQLHVPGGIWKASRLLNGENGFGLISEAVSPGFDFADMEMGNRQKLTARYPQHR ALIEKLTRAED
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323561, Length=149, Percent_Identity=42.2818791946309, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19170; Mature: 19170
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSQISASNLIASLDLEPHVEGGYFRRTYQADHRDMLETTSGSRFLMTSIYYLLTEDSP CCCCCCCHHHEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCEEHHEEEEEEEECCCC VGQFHFNHSDILHYFHLGDAIEYSLILEDGSLQTLVMGSDVLAGQHLQLHVPGGIWKASR CCEEEECHHHHEEEEECCCCEEEEEEEECCCEEEEEECCCEECCCEEEEEECCCCHHHHH LLNGENGFGLISEAVSPGFDFADMEMGNRQKLTARYPQHRALIEKLTRAED HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MNPSQISASNLIASLDLEPHVEGGYFRRTYQADHRDMLETTSGSRFLMTSIYYLLTEDSP CCCCCCCHHHEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCCCEEHHEEEEEEEECCCC VGQFHFNHSDILHYFHLGDAIEYSLILEDGSLQTLVMGSDVLAGQHLQLHVPGGIWKASR CCEEEECHHHHEEEEECCCCEEEEEEEECCCEEEEEECCCEECCCEEEEEECCCCHHHHH LLNGENGFGLISEAVSPGFDFADMEMGNRQKLTARYPQHRALIEKLTRAED HCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA