| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is actII-2 [H]
Identifier: 77458951
GI number: 77458951
Start: 3142212
End: 3143666
Strand: Reverse
Name: actII-2 [H]
Synonym: Pfl01_2726
Alternate gene names: 77458951
Gene position: 3143666-3142212 (Counterclockwise)
Preceding gene: 77458953
Following gene: 77458948
Centisome position: 48.83
GC content: 61.31
Gene sequence:
>1455_bases ATGTCTCGAATCGAAATCGAAGTGCCCGAACCCCGGCGCTGGTTGATGTTTGCCATATTGCTCGTCGGAGCGTTTCTGCC GCCCCTGGATTTTTTTATCGTCAACGTCGCCCTGCCCTCGATGCAGGAGGATCTGGGGACAGGCTCCTCTGCCGAGCAGT TGGTGATTTCTTCCTATGCAACGCTCTATGCCGTGACGCTGATTACCGGCGGACGACTCGGCGATCTGTACGGCCGCGGG CGGATGTTTTTCCTTGGCCTGCTGGGTTTCGCCGCCGCGTCGCTGATGTGCGGCCTGGCGGTTTCGCCGTGGATGCTCAT CCTCGGACGCGCCTTGCAGGGTGTGACCGCCGCCGTAATGGCCCCTCAGGCACTTGCATCGGTGCAGGCGATTTTTCCAG TGTCGGAAAGACCATTGGCATTGAGCATTTACGGGGCCGTATTTGGACTGGCGTCTGTGATCGGTCAGGCACTGGGCGGC TTTTTGATTGAGATCGACGTGTTGGGCATGGGATGGCGCGCGATCTTCCTGGTCAACCTGCCGATCGCGTTGCTGGTGAT TGCGTTCGGCATCCGTGTGCTCAAAGAAACCCGTGCGCAGCACGCAAGCAAGCTGGATCTGGTGGGCACTGCGTTGTCGA TGCTGACCCTGACCACCCTGGTCGTGCCATTGATTGAAGGCCGCGAGGCCGGATGGCCGTGGTGGGCATGGCTGTCGCTG GCCGCCAGCCCTGCGCTGGCGGTAGCGTTCTGGCGCTACGAGAGCCGCTTGCACCGGGCCGGAGGAACGCCCATCCTCGC CCCGGCCGTACTGAATGCACCGGGCCTGGGGCGAGCGCTTCTGGTCGCGCTTTGCTTCTATTCAATCGGTGTGTTTTTTC TGATGTTCTCGATGTACATGCAAAGCGCATTGCATATGAGCGCACTGCACGCCGGCCTGATCTTTCTGCCGTTTGGCGCG GGATTTCTGCTCGGTCCCCTGTCGGTTCCGCTCCTCAGGCGCATCCTCGGGGGCTACGTGAATCCTGTAGGCATGGGACT GGAAGTAGTCGGATTACTATGGCTGGGCTGGCTCGTGTCAGTGACACCGACTACCCTCGCCCCGCCCTTCACTTCTCTGA CGGTCATCCTGTTCCTGATCGGTCTGGGACAGGGGCTTGGCCTGCCGACGTTGATGCGCATGGTCACGGGCCGGGTAGCG CCGGCGTATGCCGGGATGATCGCAGGCATTACCAGCGCCACGCTGCAGATCAGCACATCGCTGAGCGTGGCACTGATTGG CGGTGTGTTTTATACCTTGCTGGGAGAACCGGCAACGGCGGTCAGCATCACTCATGCGTTCACGATCGCTGTTCTGTGCA TCGCCGTCTGCCTGGCCGTAGGGACAGCGATAAGCCTGACGTTAGCGCGCGAGCCAGCGACGGTAGCGCAAGCCTCGGCT GTACGCCCGACCTGA
Upstream 100 bases:
>100_bases AGCGATTCCCTAAATTGGGACCCGGCGACCTGACCCGGGCAGGCGCGAAGCCTTGCCTTTTAGTCGTCGTCAAACCTGAG TTCCCTACAGGATGCCTGTC
Downstream 100 bases:
>100_bases GGCGCGCTACCCCGTACCGATCATGCTGGAGGCAAGGTCGGCCAGTGCGCGCAGCCGGTCCATCTGGCGCATGTCCTGGT GATACCCCATCCAGATGTCC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSRIEIEVPEPRRWLMFAILLVGAFLPPLDFFIVNVALPSMQEDLGTGSSAEQLVISSYATLYAVTLITGGRLGDLYGRG RMFFLGLLGFAAASLMCGLAVSPWMLILGRALQGVTAAVMAPQALASVQAIFPVSERPLALSIYGAVFGLASVIGQALGG FLIEIDVLGMGWRAIFLVNLPIALLVIAFGIRVLKETRAQHASKLDLVGTALSMLTLTTLVVPLIEGREAGWPWWAWLSL AASPALAVAFWRYESRLHRAGGTPILAPAVLNAPGLGRALLVALCFYSIGVFFLMFSMYMQSALHMSALHAGLIFLPFGA GFLLGPLSVPLLRRILGGYVNPVGMGLEVVGLLWLGWLVSVTPTTLAPPFTSLTVILFLIGLGQGLGLPTLMRMVTGRVA PAYAGMIAGITSATLQISTSLSVALIGGVFYTLLGEPATAVSITHAFTIAVLCIAVCLAVGTAISLTLAREPATVAQASA VRPT
Sequences:
>Translated_484_residues MSRIEIEVPEPRRWLMFAILLVGAFLPPLDFFIVNVALPSMQEDLGTGSSAEQLVISSYATLYAVTLITGGRLGDLYGRG RMFFLGLLGFAAASLMCGLAVSPWMLILGRALQGVTAAVMAPQALASVQAIFPVSERPLALSIYGAVFGLASVIGQALGG FLIEIDVLGMGWRAIFLVNLPIALLVIAFGIRVLKETRAQHASKLDLVGTALSMLTLTTLVVPLIEGREAGWPWWAWLSL AASPALAVAFWRYESRLHRAGGTPILAPAVLNAPGLGRALLVALCFYSIGVFFLMFSMYMQSALHMSALHAGLIFLPFGA GFLLGPLSVPLLRRILGGYVNPVGMGLEVVGLLWLGWLVSVTPTTLAPPFTSLTVILFLIGLGQGLGLPTLMRMVTGRVA PAYAGMIAGITSATLQISTSLSVALIGGVFYTLLGEPATAVSITHAFTIAVLCIAVCLAVGTAISLTLAREPATVAQASA VRPT >Mature_483_residues SRIEIEVPEPRRWLMFAILLVGAFLPPLDFFIVNVALPSMQEDLGTGSSAEQLVISSYATLYAVTLITGGRLGDLYGRGR MFFLGLLGFAAASLMCGLAVSPWMLILGRALQGVTAAVMAPQALASVQAIFPVSERPLALSIYGAVFGLASVIGQALGGF LIEIDVLGMGWRAIFLVNLPIALLVIAFGIRVLKETRAQHASKLDLVGTALSMLTLTTLVVPLIEGREAGWPWWAWLSLA ASPALAVAFWRYESRLHRAGGTPILAPAVLNAPGLGRALLVALCFYSIGVFFLMFSMYMQSALHMSALHAGLIFLPFGAG FLLGPLSVPLLRRILGGYVNPVGMGLEVVGLLWLGWLVSVTPTTLAPPFTSLTVILFLIGLGQGLGLPTLMRMVTGRVAP AYAGMIAGITSATLQISTSLSVALIGGVFYTLLGEPATAVSITHAFTIAVLCIAVCLAVGTAISLTLAREPATVAQASAV RPT
Specific function: Promotes the efflux of actinorhodin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=360, Percent_Identity=24.1666666666667, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1789042, Length=214, Percent_Identity=28.9719626168224, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788710, Length=344, Percent_Identity=26.7441860465116, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788392, Length=491, Percent_Identity=26.0692464358452, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1790195, Length=160, Percent_Identity=31.875, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322958, Length=201, Percent_Identity=31.8407960199005, Blast_Score=63, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 50947; Mature: 50816
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIEIEVPEPRRWLMFAILLVGAFLPPLDFFIVNVALPSMQEDLGTGSSAEQLVISSYA CCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHH TLYAVTLITGGRLGDLYGRGRMFFLGLLGFAAASLMCGLAVSPWMLILGRALQGVTAAVM HHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APQALASVQAIFPVSERPLALSIYGAVFGLASVIGQALGGFLIEIDVLGMGWRAIFLVNL HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHH PIALLVIAFGIRVLKETRAQHASKLDLVGTALSMLTLTTLVVPLIEGREAGWPWWAWLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AASPALAVAFWRYESRLHRAGGTPILAPAVLNAPGLGRALLVALCFYSIGVFFLMFSMYM HCCHHHHHHHHHHHHHHHHCCCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QSALHMSALHAGLIFLPFGAGFLLGPLSVPLLRRILGGYVNPVGMGLEVVGLLWLGWLVS HHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH VTPTTLAPPFTSLTVILFLIGLGQGLGLPTLMRMVTGRVAPAYAGMIAGITSATLQISTS CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECC LSVALIGGVFYTLLGEPATAVSITHAFTIAVLCIAVCLAVGTAISLTLAREPATVAQASA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCC VRPT CCCC >Mature Secondary Structure SRIEIEVPEPRRWLMFAILLVGAFLPPLDFFIVNVALPSMQEDLGTGSSAEQLVISSYA CEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHH TLYAVTLITGGRLGDLYGRGRMFFLGLLGFAAASLMCGLAVSPWMLILGRALQGVTAAVM HHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APQALASVQAIFPVSERPLALSIYGAVFGLASVIGQALGGFLIEIDVLGMGWRAIFLVNL HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHH PIALLVIAFGIRVLKETRAQHASKLDLVGTALSMLTLTTLVVPLIEGREAGWPWWAWLSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AASPALAVAFWRYESRLHRAGGTPILAPAVLNAPGLGRALLVALCFYSIGVFFLMFSMYM HCCHHHHHHHHHHHHHHHHCCCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QSALHMSALHAGLIFLPFGAGFLLGPLSVPLLRRILGGYVNPVGMGLEVVGLLWLGWLVS HHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH VTPTTLAPPFTSLTVILFLIGLGQGLGLPTLMRMVTGRVAPAYAGMIAGITSATLQISTS CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECC LSVALIGGVFYTLLGEPATAVSITHAFTIAVLCIAVCLAVGTAISLTLAREPATVAQASA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHCCC VRPT CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1878971; 12000953 [H]