| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458890
Identifier: 77458890
GI number: 77458890
Start: 3060987
End: 3062453
Strand: Reverse
Name: 77458890
Synonym: Pfl01_2665
Alternate gene names: NA
Gene position: 3062453-3060987 (Counterclockwise)
Preceding gene: 77458891
Following gene: 77458884
Centisome position: 47.57
GC content: 55.35
Gene sequence:
>1467_bases GTGAGCCACAAGTTCAAATTCCTGACCCTTCCTCACCGTTCCGGAGAGGTCGCGAACGTTTTCATTCACGGCTATTCGGC CGGTCACGACATGGAAGACCGATGCGCGCTACGCAAATGCATACCGTCCTCTTTACACAACTGCATCAACATCTTCGCCT TCTGGCCGTCAGGTCATTGGGCTAAGTTCGATGATTGGTCAAGCAAAAGTATCCTTGCGGCGGGCCGACTCAGTTTTCTG GCCGGTGCAGGGCTCGCGGTGGCTGATCGCGCGTTCCACTTCAATACCAGTCGCAAGCGCGCCACAGCCATGGGTAAAAC GCTGCTATCGCAGCTTGAAACCTATCTGCTAAAACATCATCCCTACGTTTCAAAAGTCAATCTGGTCGGACATTCACTCG GCGGTCGTGTCGTCATCCATGCCCTGCTCGACTTGCAAGGCAAACCTGCGGATGACAGCCTGGTGATCGGCGATGTTCTT CTGATGGCTGCGGCGAGCACGCTGTCGGGAGATGAAGCGAAAACCATTGGCGAACGCATCAATGGCAAGCTCTACAATGC CTGGTCGAGCGACGACAAGGTCCTGTTGTTCAATCTCGGGGAAAACAGTGCCGGTCGTCAGGAGATCGACCATTGCCAGA ACGTGCCAATGCATGGGTTTGGCCATACAGACTATTGGCCACGTCTGGATCGGGTGCTGCGGGCATCAGGCTTCCATGGT TACAGGGGTGGCCTGCCCTCTGCAATACAACCCGAGTTGGTCATCAAGAACCCCGATCCGGTCGTGGCCGACCACCTTCT CTATGACCTGCTTGAATTGACCAGCGACGGAATTCGCAGCCAGGTCGTCAAGCACCTGCGTAGCAGTAGCTGGACAAAAC TGGAAACAGAGCATCCGCTCTATCTGCTGACCAAGGAATTCCAACTGCTGGGCGGTCACTGCCTGGTCAACCTGGCGCGG GGAAAAGGTCTCAAGTACGTTCAGATCCTGCTCATGCTGGCCGAACATTACGGGTTGGTAAGCGAGTTGCACGACTGTGC GCAAGTGATCGAAATGGAGGCGCTGCTGATCAGCAAATGCTTCCAGTCGTCATTCGGCGAAGAGCATGTGCTCGCATCGA TGCAGGACATTGTTCTGCAAATACATGGCCTGTCAGAGAAGGAGTATTTCGAACAGGTCGATGCCCTGGCAGCGAGTCTG ACCGTTACCTCGTACATCTCGACCCCGGAAACGCCCGCACCGGTTTATCGCAAGACCGGCTCCGCACAGACGGGTGACAG TAAAGAGTTGGTGCTCGCTAGCGGGTCGTTCCTGACATCGTTCAGCACTCTGATGCCGACCGAACGTATGAAGGCAGCGG TGATCAATCTGAAAAGTGCGGTCAAACCGGGCTACTCGGCATTGATTCCAGCGGTTGCGGCTGTCTTCTACGCGCGCTTG AAGCTGAACAATGAAGGGTTGCTCTGA
Upstream 100 bases:
>100_bases GCGAATCGCTATAGCGCAAGCTCTTGCTTGCGCTTGATTTTACAAGCAGATAGCCAAATGCCATCATTCGCGCACCGATA GCTTTAGCCAAGGACGTTGC
Downstream 100 bases:
>100_bases CGTGCTGATATAAAACCTGGCCAGCGGCTGCTGGCCAGGCTCACCGGATCAAACCACGCCGTACTCGCCTTCGATGACAT TTTGCGAGTCAAACGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MSHKFKFLTLPHRSGEVANVFIHGYSAGHDMEDRCALRKCIPSSLHNCINIFAFWPSGHWAKFDDWSSKSILAAGRLSFL AGAGLAVADRAFHFNTSRKRATAMGKTLLSQLETYLLKHHPYVSKVNLVGHSLGGRVVIHALLDLQGKPADDSLVIGDVL LMAAASTLSGDEAKTIGERINGKLYNAWSSDDKVLLFNLGENSAGRQEIDHCQNVPMHGFGHTDYWPRLDRVLRASGFHG YRGGLPSAIQPELVIKNPDPVVADHLLYDLLELTSDGIRSQVVKHLRSSSWTKLETEHPLYLLTKEFQLLGGHCLVNLAR GKGLKYVQILLMLAEHYGLVSELHDCAQVIEMEALLISKCFQSSFGEEHVLASMQDIVLQIHGLSEKEYFEQVDALAASL TVTSYISTPETPAPVYRKTGSAQTGDSKELVLASGSFLTSFSTLMPTERMKAAVINLKSAVKPGYSALIPAVAAVFYARL KLNNEGLL
Sequences:
>Translated_488_residues MSHKFKFLTLPHRSGEVANVFIHGYSAGHDMEDRCALRKCIPSSLHNCINIFAFWPSGHWAKFDDWSSKSILAAGRLSFL AGAGLAVADRAFHFNTSRKRATAMGKTLLSQLETYLLKHHPYVSKVNLVGHSLGGRVVIHALLDLQGKPADDSLVIGDVL LMAAASTLSGDEAKTIGERINGKLYNAWSSDDKVLLFNLGENSAGRQEIDHCQNVPMHGFGHTDYWPRLDRVLRASGFHG YRGGLPSAIQPELVIKNPDPVVADHLLYDLLELTSDGIRSQVVKHLRSSSWTKLETEHPLYLLTKEFQLLGGHCLVNLAR GKGLKYVQILLMLAEHYGLVSELHDCAQVIEMEALLISKCFQSSFGEEHVLASMQDIVLQIHGLSEKEYFEQVDALAASL TVTSYISTPETPAPVYRKTGSAQTGDSKELVLASGSFLTSFSTLMPTERMKAAVINLKSAVKPGYSALIPAVAAVFYARL KLNNEGLL >Mature_487_residues SHKFKFLTLPHRSGEVANVFIHGYSAGHDMEDRCALRKCIPSSLHNCINIFAFWPSGHWAKFDDWSSKSILAAGRLSFLA GAGLAVADRAFHFNTSRKRATAMGKTLLSQLETYLLKHHPYVSKVNLVGHSLGGRVVIHALLDLQGKPADDSLVIGDVLL MAAASTLSGDEAKTIGERINGKLYNAWSSDDKVLLFNLGENSAGRQEIDHCQNVPMHGFGHTDYWPRLDRVLRASGFHGY RGGLPSAIQPELVIKNPDPVVADHLLYDLLELTSDGIRSQVVKHLRSSSWTKLETEHPLYLLTKEFQLLGGHCLVNLARG KGLKYVQILLMLAEHYGLVSELHDCAQVIEMEALLISKCFQSSFGEEHVLASMQDIVLQIHGLSEKEYFEQVDALAASLT VTSYISTPETPAPVYRKTGSAQTGDSKELVLASGSFLTSFSTLMPTERMKAAVINLKSAVKPGYSALIPAVAAVFYARLK LNNEGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53604; Mature: 53473
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHKFKFLTLPHRSGEVANVFIHGYSAGHDMEDRCALRKCIPSSLHNCINIFAFWPSGHW CCCCEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCC AKFDDWSSKSILAAGRLSFLAGAGLAVADRAFHFNTSRKRATAMGKTLLSQLETYLLKHH CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCC PYVSKVNLVGHSLGGRVVIHALLDLQGKPADDSLVIGDVLLMAAASTLSGDEAKTIGERI CCHHEEHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH NGKLYNAWSSDDKVLLFNLGENSAGRQEIDHCQNVPMHGFGHTDYWPRLDRVLRASGFHG CCCEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC YRGGLPSAIQPELVIKNPDPVVADHLLYDLLELTSDGIRSQVVKHLRSSSWTKLETEHPL CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCE YLLTKEFQLLGGHCLVNLARGKGLKYVQILLMLAEHYGLVSELHDCAQVIEMEALLISKC EEEEHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQSSFGEEHVLASMQDIVLQIHGLSEKEYFEQVDALAASLTVTSYISTPETPAPVYRKTG HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC SAQTGDSKELVLASGSFLTSFSTLMPTERMKAAVINLKSAVKPGYSALIPAVAAVFYARL CCCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KLNNEGLL EECCCCCC >Mature Secondary Structure SHKFKFLTLPHRSGEVANVFIHGYSAGHDMEDRCALRKCIPSSLHNCINIFAFWPSGHW CCCEEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCC AKFDDWSSKSILAAGRLSFLAGAGLAVADRAFHFNTSRKRATAMGKTLLSQLETYLLKHH CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCC PYVSKVNLVGHSLGGRVVIHALLDLQGKPADDSLVIGDVLLMAAASTLSGDEAKTIGERI CCHHEEHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH NGKLYNAWSSDDKVLLFNLGENSAGRQEIDHCQNVPMHGFGHTDYWPRLDRVLRASGFHG CCCEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC YRGGLPSAIQPELVIKNPDPVVADHLLYDLLELTSDGIRSQVVKHLRSSSWTKLETEHPL CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCCCCE YLLTKEFQLLGGHCLVNLARGKGLKYVQILLMLAEHYGLVSELHDCAQVIEMEALLISKC EEEEHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FQSSFGEEHVLASMQDIVLQIHGLSEKEYFEQVDALAASLTVTSYISTPETPAPVYRKTG HHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC SAQTGDSKELVLASGSFLTSFSTLMPTERMKAAVINLKSAVKPGYSALIPAVAAVFYARL CCCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KLNNEGLL EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA