| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is yqjD [C]
Identifier: 77458793
GI number: 77458793
Start: 2945991
End: 2946308
Strand: Reverse
Name: yqjD [C]
Synonym: Pfl01_2568
Alternate gene names: 77458793
Gene position: 2946308-2945991 (Counterclockwise)
Preceding gene: 77458795
Following gene: 77458791
Centisome position: 45.76
GC content: 63.84
Gene sequence:
>318_bases ATGGCCCGGAAAACCGCCGTTCAAGCCGCCGAAGACCAAATCAAGGACCAGGCCTTCAGCGAACTTCAGGCGCTGATCGA AGAGTCGGAAAAACTGCTCAAGAGCAGTGCCTCGCTGGTCGGCGAGGAAGCGGAGACCCTGCGCGGGCAAATCGCCCAGA AATTGCAGCAGGCGCTCGATTCGGTCACCAGCGTGCGAGACCGCACCAAACCGGCGGTGGACGCCACCGAGAGCTACATC GGCGGGCATCCGTGGCAGACCGTGGCGATTTCCGCCGGGTTCGGTCTGGTGGTCGGCTTGCTGCTCGGTCGCCGCTGA
Upstream 100 bases:
>100_bases TCTGACGCTGGTTTTTGCTCCGGATGGAAAATCGCTGCAACTTTTCAAGGCGCGCCACACTCCATTGTTCACTGTCCATT CACCTGCAAGGAGTCACCCA
Downstream 100 bases:
>100_bases GCGCGAACAAAAAAGGCGAGCCCTCGGGCTCGTCTTTTTCATGCCCGGCAAAAAATTACTCGCCGGCCAGTTCACGCAGC TGCGACAGGGTCTGTTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MARKTAVQAAEDQIKDQAFSELQALIEESEKLLKSSASLVGEEAETLRGQIAQKLQQALDSVTSVRDRTKPAVDATESYI GGHPWQTVAISAGFGLVVGLLLGRR
Sequences:
>Translated_105_residues MARKTAVQAAEDQIKDQAFSELQALIEESEKLLKSSASLVGEEAETLRGQIAQKLQQALDSVTSVRDRTKPAVDATESYI GGHPWQTVAISAGFGLVVGLLLGRR >Mature_104_residues ARKTAVQAAEDQIKDQAFSELQALIEESEKLLKSSASLVGEEAETLRGQIAQKLQQALDSVTSVRDRTKPAVDATESYIG GHPWQTVAISAGFGLVVGLLLGRR
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11280; Mature: 11149
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTAVQAAEDQIKDQAFSELQALIEESEKLLKSSASLVGEEAETLRGQIAQKLQQALD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVTSVRDRTKPAVDATESYIGGHPWQTVAISAGFGLVVGLLLGRR HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARKTAVQAAEDQIKDQAFSELQALIEESEKLLKSSASLVGEEAETLRGQIAQKLQQALD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVTSVRDRTKPAVDATESYIGGHPWQTVAISAGFGLVVGLLLGRR HHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA