| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458733
Identifier: 77458733
GI number: 77458733
Start: 2866133
End: 2866558
Strand: Reverse
Name: 77458733
Synonym: Pfl01_2508
Alternate gene names: NA
Gene position: 2866558-2866133 (Counterclockwise)
Preceding gene: 77458734
Following gene: 77458732
Centisome position: 44.52
GC content: 56.57
Gene sequence:
>426_bases ATGTTGATGACTCTGCCGGCTGTTTGCGCGCAAGCGGCAACTCCGCCGGACGACGTGCGCGCATCCGAGCTCGCAAACGC AGACAGCTACATCCAGAAAGTGGAGCGCTGTAAGAGTTACATCGCGAGCGCGCAATGGATCTACCGGAACTACGAGTGGG CACTTTCCATCAAGCCGACCGACTGCGCCAGACAAACGCCACCGGAAGGCACGGCCTATTTATGGGATGAACTCACCCGT GATTATTCCAACAGCCGTTACTGGACAAACACTCATGGCCTGCGCCACCAGTTGATCTGTCATCTGATGGTTGCCCGGAA CAAACCTGAGTGGTACCTGGAGCCCTGGCGCCCTGACGTTGGACTTTCAAAAACAGTGGCAGAAGGCTGTAACCACGAAA CGCCGTTACTTGAAGACGCGCCCTGA
Upstream 100 bases:
>100_bases TGAGACTTACCCTTTTAAGGACACCATTGTTGGCCACAACAATTCCACAACTTGCCTGTAAAAAACCTGAGTACACATCA TGCACAGAATAATTGGCGCA
Downstream 100 bases:
>100_bases GCGCAGGCAACGGGGCCATGAACAGTAAGGGCGCAATGAATACAAAAAACATCTTCCTTGGGATTTTGTTTGCAACGCTT CTGGGTTGTACTCAAGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLMTLPAVCAQAATPPDDVRASELANADSYIQKVERCKSYIASAQWIYRNYEWALSIKPTDCARQTPPEGTAYLWDELTR DYSNSRYWTNTHGLRHQLICHLMVARNKPEWYLEPWRPDVGLSKTVAEGCNHETPLLEDAP
Sequences:
>Translated_141_residues MLMTLPAVCAQAATPPDDVRASELANADSYIQKVERCKSYIASAQWIYRNYEWALSIKPTDCARQTPPEGTAYLWDELTR DYSNSRYWTNTHGLRHQLICHLMVARNKPEWYLEPWRPDVGLSKTVAEGCNHETPLLEDAP >Mature_141_residues MLMTLPAVCAQAATPPDDVRASELANADSYIQKVERCKSYIASAQWIYRNYEWALSIKPTDCARQTPPEGTAYLWDELTR DYSNSRYWTNTHGLRHQLICHLMVARNKPEWYLEPWRPDVGLSKTVAEGCNHETPLLEDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16184; Mature: 16184
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMTLPAVCAQAATPPDDVRASELANADSYIQKVERCKSYIASAQWIYRNYEWALSIKPT CCCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DCARQTPPEGTAYLWDELTRDYSNSRYWTNTHGLRHQLICHLMVARNKPEWYLEPWRPDV CCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCC GLSKTVAEGCNHETPLLEDAP CCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MLMTLPAVCAQAATPPDDVRASELANADSYIQKVERCKSYIASAQWIYRNYEWALSIKPT CCCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC DCARQTPPEGTAYLWDELTRDYSNSRYWTNTHGLRHQLICHLMVARNKPEWYLEPWRPDV CCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCC GLSKTVAEGCNHETPLLEDAP CCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA