Definition Pseudomonas fluorescens Pf0-1 chromosome, complete genome.
Accession NC_007492
Length 6,438,405

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The map label for this gene is 77458732

Identifier: 77458732

GI number: 77458732

Start: 2865159

End: 2866097

Strand: Reverse

Name: 77458732

Synonym: Pfl01_2507

Alternate gene names: NA

Gene position: 2866097-2865159 (Counterclockwise)

Preceding gene: 77458733

Following gene: 77458717

Centisome position: 44.52

GC content: 54.21

Gene sequence:

>939_bases
ATGAATACAAAAAACATCTTCCTTGGGATTTTGTTTGCAACGCTTCTGGGTTGTACTCAAGTCGACACCAATCCACCGTT
GCCGGTCGTGAGCAACAACCCTCACGCCGAAATGAGCGGACCTAAGGTGATCGAGTTGTTGAACACGCTCTACAACCGTA
AATTTCCGAACTGCGATCAAAACAACAATCGACCTGCTTTTCTTTGTTCCGGGATCATCTTTCGAGTCACTGACAAGAAC
CCCGGCGACACGCACCATGTCTGGAACCCAAGCCCGACCTCAGTGAAAAACGGCGGTGTTTCGTTTTCCTATCTCAGGGC
CGACTCAAAATTCGGCCGCCTGGCATGGGGAAAAGGCAACGGCTTCATGCTGTACCCCATCTTTGGCGCTCCCATCGACA
AGATCGACCTTGATGTACTGTGCTCCTTCCCGATTGATGGCTGGACCTGGAACCGGACGACACCCTGCGGTGCTCATGCC
TCGTTTCCCGCAACAAGCCAGCGCTGCCAGAGTGCCGGGGTTTCCACCGCCGAACAATGGAAAAACGTATGGGACACCTC
ACCCGACAGTCATCACATTCGACAATGCGGATTTGACGTTTCCGAAGCCACCGGCAAACCGGCGGGAGTGCCCTTCTATC
AATCTGTACGAGCAAGGGGAATGCTGAGCCAGATGCCCGCGCATTTCTCCGAGCAGAATGAAATCGTGATCAAGACCTGG
CCACAGAACCTGCAAAACACACTCCCGCTCATGGCGTTCTTTTTCGTGGCCGGCGGCACCAATACTGGTCTTGCCGAAGC
ACAGGGCAATCAAAAGGATTTTTACGACTCCACAAACCCGAAGATCTGGGTGCCAGTGATCCGCCTGTTTCCGCCGGCCA
CACCTGCCACCGAGGCAACGTTCCAGTACGTCGATGCGGACCAACTGGTCAAGCCGTAA

Upstream 100 bases:

>100_bases
GACTTTCAAAAACAGTGGCAGAAGGCTGTAACCACGAAACGCCGTTACTTGAAGACGCGCCCTGAGCGCAGGCAACGGGG
CCATGAACAGTAAGGGCGCA

Downstream 100 bases:

>100_bases
CCCGACGCAGCCGCGCCATGCTCAGGGTGTCGACCCATTGCCCGTCACGCACGGCGTAATCCCGGAACAGGCCTTCAGTC
TCGAAGCCGAACTTGCGGTA

Product: halovibrin HvnC

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNTKNIFLGILFATLLGCTQVDTNPPLPVVSNNPHAEMSGPKVIELLNTLYNRKFPNCDQNNNRPAFLCSGIIFRVTDKN
PGDTHHVWNPSPTSVKNGGVSFSYLRADSKFGRLAWGKGNGFMLYPIFGAPIDKIDLDVLCSFPIDGWTWNRTTPCGAHA
SFPATSQRCQSAGVSTAEQWKNVWDTSPDSHHIRQCGFDVSEATGKPAGVPFYQSVRARGMLSQMPAHFSEQNEIVIKTW
PQNLQNTLPLMAFFFVAGGTNTGLAEAQGNQKDFYDSTNPKIWVPVIRLFPPATPATEATFQYVDADQLVKP

Sequences:

>Translated_312_residues
MNTKNIFLGILFATLLGCTQVDTNPPLPVVSNNPHAEMSGPKVIELLNTLYNRKFPNCDQNNNRPAFLCSGIIFRVTDKN
PGDTHHVWNPSPTSVKNGGVSFSYLRADSKFGRLAWGKGNGFMLYPIFGAPIDKIDLDVLCSFPIDGWTWNRTTPCGAHA
SFPATSQRCQSAGVSTAEQWKNVWDTSPDSHHIRQCGFDVSEATGKPAGVPFYQSVRARGMLSQMPAHFSEQNEIVIKTW
PQNLQNTLPLMAFFFVAGGTNTGLAEAQGNQKDFYDSTNPKIWVPVIRLFPPATPATEATFQYVDADQLVKP
>Mature_312_residues
MNTKNIFLGILFATLLGCTQVDTNPPLPVVSNNPHAEMSGPKVIELLNTLYNRKFPNCDQNNNRPAFLCSGIIFRVTDKN
PGDTHHVWNPSPTSVKNGGVSFSYLRADSKFGRLAWGKGNGFMLYPIFGAPIDKIDLDVLCSFPIDGWTWNRTTPCGAHA
SFPATSQRCQSAGVSTAEQWKNVWDTSPDSHHIRQCGFDVSEATGKPAGVPFYQSVRARGMLSQMPAHFSEQNEIVIKTW
PQNLQNTLPLMAFFFVAGGTNTGLAEAQGNQKDFYDSTNPKIWVPVIRLFPPATPATEATFQYVDADQLVKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34412; Mature: 34412

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKNIFLGILFATLLGCTQVDTNPPLPVVSNNPHAEMSGPKVIELLNTLYNRKFPNCDQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
NNNRPAFLCSGIIFRVTDKNPGDTHHVWNPSPTSVKNGGVSFSYLRADSKFGRLAWGKGN
CCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCC
GFMLYPIFGAPIDKIDLDVLCSFPIDGWTWNRTTPCGAHASFPATSQRCQSAGVSTAEQW
CEEEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHH
KNVWDTSPDSHHIRQCGFDVSEATGKPAGVPFYQSVRARGMLSQMPAHFSEQNEIVIKTW
HHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
PQNLQNTLPLMAFFFVAGGTNTGLAEAQGNQKDFYDSTNPKIWVPVIRLFPPATPATEAT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCE
FQYVDADQLVKP
EEEECHHHHCCC
>Mature Secondary Structure
MNTKNIFLGILFATLLGCTQVDTNPPLPVVSNNPHAEMSGPKVIELLNTLYNRKFPNCDQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
NNNRPAFLCSGIIFRVTDKNPGDTHHVWNPSPTSVKNGGVSFSYLRADSKFGRLAWGKGN
CCCCCEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCC
GFMLYPIFGAPIDKIDLDVLCSFPIDGWTWNRTTPCGAHASFPATSQRCQSAGVSTAEQW
CEEEEEECCCCCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHH
KNVWDTSPDSHHIRQCGFDVSEATGKPAGVPFYQSVRARGMLSQMPAHFSEQNEIVIKTW
HHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
PQNLQNTLPLMAFFFVAGGTNTGLAEAQGNQKDFYDSTNPKIWVPVIRLFPPATPATEAT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCE
FQYVDADQLVKP
EEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA