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The map label for this gene is nodV [H]

Identifier: 77458683

GI number: 77458683

Start: 2810826

End: 2812280

Strand: Reverse

Name: nodV [H]

Synonym: Pfl01_2458

Alternate gene names: 77458683

Gene position: 2812280-2810826 (Counterclockwise)

Preceding gene: 77458684

Following gene: 77458682

Centisome position: 43.68

GC content: 59.11

Gene sequence:

>1455_bases
ATGTCTATCATCAAACGTCGCGCACAACTTCTTTGTTCAGACGCCTTCGCCTGGCTTTGCGCCATAGCGGTCGGCAGCAT
GATCTATATAACCAACGCGTACCTCGATCTGGACGTTGCGCCGACGTTGTTCTACATCACGCTGGTATTCATGTCCGCGA
ACATCTTCCCGGTACCGGTATTTCTTGCCGTCGCGTTGGGTTGCCTCACGCTGCTGACGGCCGACTTCCTGGTCGATGAG
GGTTATCGCGATCACCGCAGCATCGCCGGATTCGTCAGGTGCCTGATCGCGCTGACGACCATTTCCCTGCTCGCGTTGCG
CAGCAAACGCGCCACTGAAACGCTGCGGCGCAAGGAAGCGTTCTTTCTGGGCGCACAGAAACTTACCCACACCGGCAGTA
TCGGTTTCATCATCGATAAAAAAGTCAGCGTTTCATGGTCGCAAGAGTCGTCGCGTATTTTCGAGTATTCGCCGGACGTC
ACCCCGACACTGGCGCTGGTCAAGTCACGCACTCATCCCGACGACCTGCCGGTTATCGATCAGGTGCTGGAGCAGTTTGC
GCGCCGGCAGGAGCTGGTCGAAGTCGAGCATCGGCTGCTCATGCCGGATGGTCGGATCAAGCACGTGCAGATGATCGCCA
GCCCGTTGCCCAGACATCGCGGGCGCACGCAATACGCCGGGGCGCTGATGGATGTCACCGCCAGCAAACAGTCGGAAGAG
GCGTTGTTTCACTCGCAAGCCACCCTCGCCCACGTCACGCGCCTGACTTCCATGGGCGAACTGGCCGCGTCGATTGCCCA
CGAAATCAATCAGCCGCTGGCAGCGGTCATCACCAGCGGCGAATCCTGCAAACGCTGGATCAACCGGCCCGAACCCAACC
TGGAAGAAGCCCGCCGTTCGCTGGACCGGATCATTCAAAACTCGGTCAGGGTCTCCGATGTCATCGCCTGTATTCGAGCG
TTATCGCGACACAGCGAGGTGCAGCGCAATGTCGAAGTGTTCGACGACATCGTCAGTGACTCGCTGACGCTGATGCAACA
TGACATCAGCTTCCATGAGGTTCGCCCGCACGCCCGACTGGGCACTCACGGTGCGCGGATCAAAGGTGACCGGGTACAAC
TGCAGCAAGTCATCATCAATCTGATCATCAACGCCTGCCAGGCCATGGCCAATGTGCTTGACCGCGCCCGGACGCTGCGG
ATCACCACCTCGATCCTGCACAACGAGGCCGTGCTTGAAATCGCCGACTCCGGCGTCGGCATTGCCGAGGACATCCTGCC
TTCGCTGTTCGACCCCTTTTTCACCACCAAGCCCACCGGCCTGGGAATGGGCCTCTCGATTTGCCGTTCGATCATTGAAT
TCCACGGCGGCCGCATCTGGGTCAACAGCACCGAGGGCGTCGGCACGCAGTTTGTGTTTGCGATTCCATTGGCTGCGCTC
GAACACGATCAATGA

Upstream 100 bases:

>100_bases
AGACTTTTTAACCTCTTCATTAATACGCCTTTCATAGCGTTTGCCTGCTTCATCGAAAGAACACGACCTGCCGTCCGATA
GCAAAAATCTGGAAGAATAA

Downstream 100 bases:

>100_bases
CAACCATCCACCCCTGATGTCGCCCGGTGGCGATATGGAGACCCGCATTGTCTATCCAACGTACAAACCCCGGCGCAGAA
CCCGAAACCCCGGTACACGA

Product: periplasmic sensor Signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSIIKRRAQLLCSDAFAWLCAIAVGSMIYITNAYLDLDVAPTLFYITLVFMSANIFPVPVFLAVALGCLTLLTADFLVDE
GYRDHRSIAGFVRCLIALTTISLLALRSKRATETLRRKEAFFLGAQKLTHTGSIGFIIDKKVSVSWSQESSRIFEYSPDV
TPTLALVKSRTHPDDLPVIDQVLEQFARRQELVEVEHRLLMPDGRIKHVQMIASPLPRHRGRTQYAGALMDVTASKQSEE
ALFHSQATLAHVTRLTSMGELAASIAHEINQPLAAVITSGESCKRWINRPEPNLEEARRSLDRIIQNSVRVSDVIACIRA
LSRHSEVQRNVEVFDDIVSDSLTLMQHDISFHEVRPHARLGTHGARIKGDRVQLQQVIINLIINACQAMANVLDRARTLR
ITTSILHNEAVLEIADSGVGIAEDILPSLFDPFFTTKPTGLGMGLSICRSIIEFHGGRIWVNSTEGVGTQFVFAIPLAAL
EHDQ

Sequences:

>Translated_484_residues
MSIIKRRAQLLCSDAFAWLCAIAVGSMIYITNAYLDLDVAPTLFYITLVFMSANIFPVPVFLAVALGCLTLLTADFLVDE
GYRDHRSIAGFVRCLIALTTISLLALRSKRATETLRRKEAFFLGAQKLTHTGSIGFIIDKKVSVSWSQESSRIFEYSPDV
TPTLALVKSRTHPDDLPVIDQVLEQFARRQELVEVEHRLLMPDGRIKHVQMIASPLPRHRGRTQYAGALMDVTASKQSEE
ALFHSQATLAHVTRLTSMGELAASIAHEINQPLAAVITSGESCKRWINRPEPNLEEARRSLDRIIQNSVRVSDVIACIRA
LSRHSEVQRNVEVFDDIVSDSLTLMQHDISFHEVRPHARLGTHGARIKGDRVQLQQVIINLIINACQAMANVLDRARTLR
ITTSILHNEAVLEIADSGVGIAEDILPSLFDPFFTTKPTGLGMGLSICRSIIEFHGGRIWVNSTEGVGTQFVFAIPLAAL
EHDQ
>Mature_483_residues
SIIKRRAQLLCSDAFAWLCAIAVGSMIYITNAYLDLDVAPTLFYITLVFMSANIFPVPVFLAVALGCLTLLTADFLVDEG
YRDHRSIAGFVRCLIALTTISLLALRSKRATETLRRKEAFFLGAQKLTHTGSIGFIIDKKVSVSWSQESSRIFEYSPDVT
PTLALVKSRTHPDDLPVIDQVLEQFARRQELVEVEHRLLMPDGRIKHVQMIASPLPRHRGRTQYAGALMDVTASKQSEEA
LFHSQATLAHVTRLTSMGELAASIAHEINQPLAAVITSGESCKRWINRPEPNLEEARRSLDRIIQNSVRVSDVIACIRAL
SRHSEVQRNVEVFDDIVSDSLTLMQHDISFHEVRPHARLGTHGARIKGDRVQLQQVIINLIINACQAMANVLDRARTLRI
TTSILHNEAVLEIADSGVGIAEDILPSLFDPFFTTKPTGLGMGLSICRSIIEFHGGRIWVNSTEGVGTQFVFAIPLAALE
HDQ

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1788549, Length=279, Percent_Identity=29.0322580645161, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI145693157, Length=299, Percent_Identity=25.4180602006689, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1790300, Length=296, Percent_Identity=27.027027027027, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 53746; Mature: 53615

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIKRRAQLLCSDAFAWLCAIAVGSMIYITNAYLDLDVAPTLFYITLVFMSANIFPVPV
CHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECEEECCHHHHHHHHHHHHHHCCCCHHHH
FLAVALGCLTLLTADFLVDEGYRDHRSIAGFVRCLIALTTISLLALRSKRATETLRRKEA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLGAQKLTHTGSIGFIIDKKVSVSWSQESSRIFEYSPDVTPTLALVKSRTHPDDLPVID
HHHHHHHHHCCCCEEEEEECCEEEEECCCCCCEEEECCCCCHHHHHHHCCCCCCCCCHHH
QVLEQFARRQELVEVEHRLLMPDGRIKHVQMIASPLPRHRGRTQYAGALMDVTASKQSEE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHH
ALFHSQATLAHVTRLTSMGELAASIAHEINQPLAAVITSGESCKRWINRPEPNLEEARRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHH
LDRIIQNSVRVSDVIACIRALSRHSEVQRNVEVFDDIVSDSLTLMQHDISFHEVRPHARL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHC
GTHGARIKGDRVQLQQVIINLIINACQAMANVLDRARTLRITTSILHNEAVLEIADSGVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
IAEDILPSLFDPFFTTKPTGLGMGLSICRSIIEFHGGRIWVNSTEGVGTQFVFAIPLAAL
HHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
EHDQ
CCCC
>Mature Secondary Structure 
SIIKRRAQLLCSDAFAWLCAIAVGSMIYITNAYLDLDVAPTLFYITLVFMSANIFPVPV
HHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECEEECCHHHHHHHHHHHHHHCCCCHHHH
FLAVALGCLTLLTADFLVDEGYRDHRSIAGFVRCLIALTTISLLALRSKRATETLRRKEA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FFLGAQKLTHTGSIGFIIDKKVSVSWSQESSRIFEYSPDVTPTLALVKSRTHPDDLPVID
HHHHHHHHHCCCCEEEEEECCEEEEECCCCCCEEEECCCCCHHHHHHHCCCCCCCCCHHH
QVLEQFARRQELVEVEHRLLMPDGRIKHVQMIASPLPRHRGRTQYAGALMDVTASKQSEE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHH
ALFHSQATLAHVTRLTSMGELAASIAHEINQPLAAVITSGESCKRWINRPEPNLEEARRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCCCHHHHHHH
LDRIIQNSVRVSDVIACIRALSRHSEVQRNVEVFDDIVSDSLTLMQHDISFHEVRPHARL
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHC
GTHGARIKGDRVQLQQVIINLIINACQAMANVLDRARTLRITTSILHNEAVLEIADSGVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCC
IAEDILPSLFDPFFTTKPTGLGMGLSICRSIIEFHGGRIWVNSTEGVGTQFVFAIPLAAL
HHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHH
EHDQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]