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The map label for this gene is glxA [H]

Identifier: 77458612

GI number: 77458612

Start: 2745510

End: 2746535

Strand: Direct

Name: glxA [H]

Synonym: Pfl01_2385

Alternate gene names: 77458612

Gene position: 2745510-2746535 (Clockwise)

Preceding gene: 77458610

Following gene: 77458614

Centisome position: 42.64

GC content: 62.18

Gene sequence:

>1026_bases
ATGGACCCCACCTTGATCGAACGACGCCAATTCAGCGGTGGCATGAAAGGCAAGAACCTTCGCTACCTGAACGAGCCCGC
CAGCGGGCCGGGACGCATGACCCGCACCGGGTTCGTGCTGCTGGAGCATTTTTCCCTGCCGGCCTTCACTCAGGCGCTGG
ACACTCTTGTCACCGCCAATCTGCTGCGCCCCGGTCTATTTTCCACGCGCACCTTTGGCCTGAGCGACGGCGAAGTGATC
AGCGATCTGGGGCTGGTGATCCGCCCGGACTCGCGTCTGGAAACCAGCGTGTTGCAGGAACTGGATCTGCTGGTGATCTG
CGGCGGTTACCGCACGGAATTGAAGGCGAGCGACGAGTTCATCAACCTGCTGAAAATGGCCGCCGAGGCCGGCGTGATAC
TGGCCGGGCTGTGGAACGGCGCGTGGTTCCTGGGTCGGGCAGGGGTGCTGGAAGGCTACCGCTGTGCGATTCACCCGGAG
CATCGGCCGGCGCTGGCGGAAATTTCCAAGGCGACCCAGGTCAGCAGCGAGCCCTACGTGATCGACCGCGACCGTTTGAC
GGCGTCGAGTCCGTCCGGCGCGTTCCACATGGCGCTGGACTGGATCAAGGGCCTGCACGACAAGGCGCTGGTCGAAGGCA
TCGAAGACATTCTGGCGTTCGAGGAATCGCGTTACCGGCGGATCAAGCCGACCGAGAACCTCTGCGTCAGCGCGCCGTTG
CGTGAGGTGGTGAAGCTGATGGACGCCAATCTCGAAGAACCGCTGGAGCTGGAGCAACTGGCGGTGTATGCCGGGCGTTC
CCGGCGTCAGCTGGAACGGCTGTTCAAAGAACAACTGGGCACCACGCCGCAGCGTTATTACATGGAGCTGCGCATCACCG
AGGCCCGGCGTCTGCTGCAACACACCGAACTGTCTCAGGTGGACGTGCTGGTGGCGTGCGGATTCGTGTCGCCGAGCCAT
TTCAGCAAGTGCTACAGCGCCTATTTCGGTTATCGCCCATCCAAAGAAAAACGGCTCGTCAAATGA

Upstream 100 bases:

>100_bases
GCAGGCAAATTCGTTCAGGCTGATCGTTCCCTGCAGTGCTTGCGTCGTTCGCGAGTAATTTGCTGCGGCGCCGGTTAGCA
TGGCGGCATAACAACGAACG

Downstream 100 bases:

>100_bases
CGAGCCGTTTGGCGTGCCGCTTCAGAGGTGATCGGCGTCGATGATCGCCTGAGCGAAGGCTTTCGGGTCTTCCTGCGGCA
GGTTGTGACCGATGCCACCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MDPTLIERRQFSGGMKGKNLRYLNEPASGPGRMTRTGFVLLEHFSLPAFTQALDTLVTANLLRPGLFSTRTFGLSDGEVI
SDLGLVIRPDSRLETSVLQELDLLVICGGYRTELKASDEFINLLKMAAEAGVILAGLWNGAWFLGRAGVLEGYRCAIHPE
HRPALAEISKATQVSSEPYVIDRDRLTASSPSGAFHMALDWIKGLHDKALVEGIEDILAFEESRYRRIKPTENLCVSAPL
REVVKLMDANLEEPLELEQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRITEARRLLQHTELSQVDVLVACGFVSPSH
FSKCYSAYFGYRPSKEKRLVK

Sequences:

>Translated_341_residues
MDPTLIERRQFSGGMKGKNLRYLNEPASGPGRMTRTGFVLLEHFSLPAFTQALDTLVTANLLRPGLFSTRTFGLSDGEVI
SDLGLVIRPDSRLETSVLQELDLLVICGGYRTELKASDEFINLLKMAAEAGVILAGLWNGAWFLGRAGVLEGYRCAIHPE
HRPALAEISKATQVSSEPYVIDRDRLTASSPSGAFHMALDWIKGLHDKALVEGIEDILAFEESRYRRIKPTENLCVSAPL
REVVKLMDANLEEPLELEQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRITEARRLLQHTELSQVDVLVACGFVSPSH
FSKCYSAYFGYRPSKEKRLVK
>Mature_341_residues
MDPTLIERRQFSGGMKGKNLRYLNEPASGPGRMTRTGFVLLEHFSLPAFTQALDTLVTANLLRPGLFSTRTFGLSDGEVI
SDLGLVIRPDSRLETSVLQELDLLVICGGYRTELKASDEFINLLKMAAEAGVILAGLWNGAWFLGRAGVLEGYRCAIHPE
HRPALAEISKATQVSSEPYVIDRDRLTASSPSGAFHMALDWIKGLHDKALVEGIEDILAFEESRYRRIKPTENLCVSAPL
REVVKLMDANLEEPLELEQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRITEARRLLQHTELSQVDVLVACGFVSPSH
FSKCYSAYFGYRPSKEKRLVK

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=109, Percent_Identity=34.8623853211009, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38293; Mature: 38293

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPTLIERRQFSGGMKGKNLRYLNEPASGPGRMTRTGFVLLEHFSLPAFTQALDTLVTAN
CCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLRPGLFSTRTFGLSDGEVISDLGLVIRPDSRLETSVLQELDLLVICGGYRTELKASDEF
HHCCCCCCCEECCCCCCHHHHHCCEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHH
INLLKMAAEAGVILAGLWNGAWFLGRAGVLEGYRCAIHPEHRPALAEISKATQVSSEPYV
HHHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEE
IDRDRLTASSPSGAFHMALDWIKGLHDKALVEGIEDILAFEESRYRRIKPTENLCVSAPL
EECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHH
REVVKLMDANLEEPLELEQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRITEARRLLQ
HHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEEEEHHHHHHHHH
HTELSQVDVLVACGFVSPSHFSKCYSAYFGYRPSKEKRLVK
HCCHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDPTLIERRQFSGGMKGKNLRYLNEPASGPGRMTRTGFVLLEHFSLPAFTQALDTLVTAN
CCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
LLRPGLFSTRTFGLSDGEVISDLGLVIRPDSRLETSVLQELDLLVICGGYRTELKASDEF
HHCCCCCCCEECCCCCCHHHHHCCEEECCCCHHHHHHHHHCCEEEEECCCCCCCCCHHHH
INLLKMAAEAGVILAGLWNGAWFLGRAGVLEGYRCAIHPEHRPALAEISKATQVSSEPYV
HHHHHHHHHCCEEEEEECCCHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEE
IDRDRLTASSPSGAFHMALDWIKGLHDKALVEGIEDILAFEESRYRRIKPTENLCVSAPL
EECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHH
REVVKLMDANLEEPLELEQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRITEARRLLQ
HHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHEEEEEHHHHHHHHH
HTELSQVDVLVACGFVSPSHFSKCYSAYFGYRPSKEKRLVK
HCCHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]