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The map label for this gene is yjgH [H]

Identifier: 77458601

GI number: 77458601

Start: 2732911

End: 2733306

Strand: Reverse

Name: yjgH [H]

Synonym: Pfl01_2374

Alternate gene names: 77458601

Gene position: 2733306-2732911 (Counterclockwise)

Preceding gene: 77458602

Following gene: 77458596

Centisome position: 42.45

GC content: 60.61

Gene sequence:

>396_bases
ATGCCCGATCGCGAAATCATCATCCCCGACTCCATGAAACCCATCGTCGAACGCGCCGGTTACGCCCCGGCGGTTCTGGT
CGGCGATACGCTTTACTGCGCCGGTCAGGTGGGCCGGACGGCTGATTTGAAGGTCATCGAAGACCCCGAGCAGCAATTCA
TCCGCGCCTGGGAAAACCTCGACGAGGTGCTGAAGGCCGGTGGCTGCACCTTCAACGATGTGGTGGAGATGACCACCTAT
CACGTCGACATGAGCCAACACATGCCGGTGTTTCGTGACGTGAAAAACCGCGTGTTCCCCAAAGGCTTCTGCGCCTGGAC
CTGCATCGGTGTCAGCGAGCTGGCCCATCCGGGGCTGCTGGTGGAAATCAAATGCGTGGCGGTGCGCAGACGCTGA

Upstream 100 bases:

>100_bases
GCTGACGGCGGTGGGCGATTCGGTGTTTGTGCGAGTGGATACCGAGCAGTTGGCAGCGGCCGCGCACGGTCGCTGAAATC
CGTCACTGAAGGAAAACTCG

Downstream 100 bases:

>100_bases
GCCTTACGCCGGCTGGTGACTGGTCACGCAGTGAATCCCGCCACCACCGGCCGCGATGGCGTCGATGTTGATCTGCACCA
CGTCGCGGTTCGGGTAGAGC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MPDREIIIPDSMKPIVERAGYAPAVLVGDTLYCAGQVGRTADLKVIEDPEQQFIRAWENLDEVLKAGGCTFNDVVEMTTY
HVDMSQHMPVFRDVKNRVFPKGFCAWTCIGVSELAHPGLLVEIKCVAVRRR

Sequences:

>Translated_131_residues
MPDREIIIPDSMKPIVERAGYAPAVLVGDTLYCAGQVGRTADLKVIEDPEQQFIRAWENLDEVLKAGGCTFNDVVEMTTY
HVDMSQHMPVFRDVKNRVFPKGFCAWTCIGVSELAHPGLLVEIKCVAVRRR
>Mature_130_residues
PDREIIIPDSMKPIVERAGYAPAVLVGDTLYCAGQVGRTADLKVIEDPEQQFIRAWENLDEVLKAGGCTFNDVVEMTTYH
VDMSQHMPVFRDVKNRVFPKGFCAWTCIGVSELAHPGLLVEIKCVAVRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=128, Percent_Identity=34.375, Blast_Score=80, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14692; Mature: 14561

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDREIIIPDSMKPIVERAGYAPAVLVGDTLYCAGQVGRTADLKVIEDPEQQFIRAWENL
CCCCCEECCCCCHHHHHHCCCCCEEEECCCEEECCCCCCCCCCEEEECHHHHHHHHHHHH
DEVLKAGGCTFNDVVEMTTYHVDMSQHMPVFRDVKNRVFPKGFCAWTCIGVSELAHPGLL
HHHHHHCCCCHHHHHHHHHEEECHHHCCCHHHHHHHHCCCCCCHHEEEECHHHHCCCCEE
VEIKCVAVRRR
EEEEEEEEECC
>Mature Secondary Structure 
PDREIIIPDSMKPIVERAGYAPAVLVGDTLYCAGQVGRTADLKVIEDPEQQFIRAWENL
CCCCEECCCCCHHHHHHCCCCCEEEECCCEEECCCCCCCCCCEEEECHHHHHHHHHHHH
DEVLKAGGCTFNDVVEMTTYHVDMSQHMPVFRDVKNRVFPKGFCAWTCIGVSELAHPGLL
HHHHHHCCCCHHHHHHHHHEEECHHHCCCHHHHHHHHCCCCCCHHEEEECHHHHCCCCEE
VEIKCVAVRRR
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]