| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458593
Identifier: 77458593
GI number: 77458593
Start: 2725799
End: 2726152
Strand: Reverse
Name: 77458593
Synonym: Pfl01_2366
Alternate gene names: NA
Gene position: 2726152-2725799 (Counterclockwise)
Preceding gene: 77458594
Following gene: 77458588
Centisome position: 42.34
GC content: 62.71
Gene sequence:
>354_bases ATGTCCGACACCTTGTTGAAGCCCAGTCTGCCCGGCATCGCCCTGCGTCGCTGGCGAGTGCTGCACCGCGTCAAGCAGAG CCATGCCGCCGAGTTGTTCAAGGTCACCCAGTCGACGATTTCCCGCTGGGAAAGCGGCGTGCAGGCGATGGATCCGGACG CCCATCTTCAGCTCGAACGGCTGCTCGCAGCACGACTCGAAAGCGCCGCCGATCAGGCCCTCGCGCGACTCAAGGCTCAT GCAGGCCTGGAGTTGCCGGGGATTCCGGCGGAATACTTTCAGGCGTTGGCGTTTGACGGAGAATTGCCGGTCGGAGTCGT CAGCTACCACGAGGCTTTTGACACCACCGAGTAA
Upstream 100 bases:
>100_bases GATTGCCAAGCTGCCGGAATGACCTGATATCGCGTCGATTTGCAGCACGGGCCGACAGTCTTCAGACTGTCGGCCCGCAT TCCTTTTGCGATCCATCGCC
Downstream 100 bases:
>100_bases GGCCCGAAACACTTAGCGCACCCACCACCGCGCCATCAACCGCGAACTCTGCGGCATCAGCCAATACACCATGTTGAACG AGATCAACCCGGCGACCAGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MSDTLLKPSLPGIALRRWRVLHRVKQSHAAELFKVTQSTISRWESGVQAMDPDAHLQLERLLAARLESAADQALARLKAH AGLELPGIPAEYFQALAFDGELPVGVVSYHEAFDTTE
Sequences:
>Translated_117_residues MSDTLLKPSLPGIALRRWRVLHRVKQSHAAELFKVTQSTISRWESGVQAMDPDAHLQLERLLAARLESAADQALARLKAH AGLELPGIPAEYFQALAFDGELPVGVVSYHEAFDTTE >Mature_116_residues SDTLLKPSLPGIALRRWRVLHRVKQSHAAELFKVTQSTISRWESGVQAMDPDAHLQLERLLAARLESAADQALARLKAHA GLELPGIPAEYFQALAFDGELPVGVVSYHEAFDTTE
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12930; Mature: 12799
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLLKPSLPGIALRRWRVLHRVKQSHAAELFKVTQSTISRWESGVQAMDPDAHLQLER CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LLAARLESAADQALARLKAHAGLELPGIPAEYFQALAFDGELPVGVVSYHEAFDTTE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SDTLLKPSLPGIALRRWRVLHRVKQSHAAELFKVTQSTISRWESGVQAMDPDAHLQLER CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH LLAARLESAADQALARLKAHAGLELPGIPAEYFQALAFDGELPVGVVSYHEAFDTTE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA