| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458542
Identifier: 77458542
GI number: 77458542
Start: 2669105
End: 2670277
Strand: Reverse
Name: 77458542
Synonym: Pfl01_2315
Alternate gene names: NA
Gene position: 2670277-2669105 (Counterclockwise)
Preceding gene: 77458543
Following gene: 77458541
Centisome position: 41.47
GC content: 65.47
Gene sequence:
>1173_bases ATGACCGCCCGTTACGATTTCATTGTGGTGGGCGGCGGCATCGCCGGTGTCTCGGCCGCTTATGAGCTGGCCGCTCACGG CAGCGTCTGCCTGCTCGAACAGGAACAGCAACTGGCCTATCACACCACTGGCCGTTCGGCGGCGATCTCGATGGAAAGCT ACGGCAACCAGCAGATCCGCTCGCTGACCTGCGCGTCCCGACGCTTCTTCGAGAACCCGCCGGAAGGTCTGGCCGAGCAT CCGCTGTGGGCACCTCGGGGTGCCTTGATCGTGGCGCAGGCCGCGCGGGTGGACAAACTGGCGGCGCGGTTCAATGCGGT ATTGGCGCAAGTGCCAAGCGCAAAGTTCCTCGATGCCAAGCAGGTGCTGGAACTGGTGCCCTACCTTGCCGAAGGCGCCT GGAGCGCCGGGATCTATGAGCCCAGCGCTTTCGATCTGGATGTGCATGGAATCCACGGCGCCTACCTCGGCGGCCTGCGT GCCCGGGGCGGCGTGGTCAAACGCGAGAGCGAAGTGCTGCGCGGCGAACGGCGCGCCGGGCACTGGACCTTGCATACTGC TGACGGCCAGCAACTGCAAGCCGCCATCGTGGTCAACGCGGCCGGCGCCTGGGCCGATGAACTGGCCGAGCGCTGCGGCG TGCCCAAGGTCGGCGTGCGACCGTTGCGGCGCACCGTGCTGGCAGTCGATCCGCAGTGCGACGTGCACCACACGCCGTAT CTGGGCACGGTCGACGAAGACATTTTCATCAAGCCCGAGGCCGGTCGGCTGATCGTTTCTCCCTGCGACGAAAGCCCTTC GCTGCCCTGCGATGCGTTGCCGGAAGAACTTGATCTGGCGATCACCATGGATCGCCTGCAGAACACCACACGCCTGCGCC CACGCTCGATCATCAATAAATGGGCCGGCCTGCGCACGTTTGTCGCCGACCGCTCGCCGGTGCTCGGACAGGATCCCGAA GAGGAAAGCTTCATCTGGCTGGCCGCTCTCGGTGGCTACGGCATTCAGGCCGCGCCGGCCATCGCCCGGCTGTGCGCCCA CGCCGCGCTGGGTGTTGCCATGCCGAAGGATCTGGCGGCGCTGCAACTCAATTACCAGCACTTTTCCCCGGCTCGCTGCC GCGACGAGGCATTTGCCCGTCTGGCCGTGAAACAGGTTGCCGATTTGCACTAA
Upstream 100 bases:
>100_bases CCGCCGCGTTCTGGGGCTTGATCTTCGGCCTTGTCGCCCACTTCGTGCTGACCTGGACCCGGGAAAGCAAAGCCGCCGCC ATTGCCGAGGGCAGCCGTCC
Downstream 100 bases:
>100_bases CCCACCACCCACCCAACAAGGATCGTCACCATGCAAACCAACGCTCAAATCCAGTCCGCCGCCAAGCCATTCCTGGGCGA AGAAAACGTGATTTTCACCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Oxidoreductase; Glycine/D-Amino Acid Oxidase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Domain-Containing Protein; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTARYDFIVVGGGIAGVSAAYELAAHGSVCLLEQEQQLAYHTTGRSAAISMESYGNQQIRSLTCASRRFFENPPEGLAEH PLWAPRGALIVAQAARVDKLAARFNAVLAQVPSAKFLDAKQVLELVPYLAEGAWSAGIYEPSAFDLDVHGIHGAYLGGLR ARGGVVKRESEVLRGERRAGHWTLHTADGQQLQAAIVVNAAGAWADELAERCGVPKVGVRPLRRTVLAVDPQCDVHHTPY LGTVDEDIFIKPEAGRLIVSPCDESPSLPCDALPEELDLAITMDRLQNTTRLRPRSIINKWAGLRTFVADRSPVLGQDPE EESFIWLAALGGYGIQAAPAIARLCAHAALGVAMPKDLAALQLNYQHFSPARCRDEAFARLAVKQVADLH
Sequences:
>Translated_390_residues MTARYDFIVVGGGIAGVSAAYELAAHGSVCLLEQEQQLAYHTTGRSAAISMESYGNQQIRSLTCASRRFFENPPEGLAEH PLWAPRGALIVAQAARVDKLAARFNAVLAQVPSAKFLDAKQVLELVPYLAEGAWSAGIYEPSAFDLDVHGIHGAYLGGLR ARGGVVKRESEVLRGERRAGHWTLHTADGQQLQAAIVVNAAGAWADELAERCGVPKVGVRPLRRTVLAVDPQCDVHHTPY LGTVDEDIFIKPEAGRLIVSPCDESPSLPCDALPEELDLAITMDRLQNTTRLRPRSIINKWAGLRTFVADRSPVLGQDPE EESFIWLAALGGYGIQAAPAIARLCAHAALGVAMPKDLAALQLNYQHFSPARCRDEAFARLAVKQVADLH >Mature_389_residues TARYDFIVVGGGIAGVSAAYELAAHGSVCLLEQEQQLAYHTTGRSAAISMESYGNQQIRSLTCASRRFFENPPEGLAEHP LWAPRGALIVAQAARVDKLAARFNAVLAQVPSAKFLDAKQVLELVPYLAEGAWSAGIYEPSAFDLDVHGIHGAYLGGLRA RGGVVKRESEVLRGERRAGHWTLHTADGQQLQAAIVVNAAGAWADELAERCGVPKVGVRPLRRTVLAVDPQCDVHHTPYL GTVDEDIFIKPEAGRLIVSPCDESPSLPCDALPEELDLAITMDRLQNTTRLRPRSIINKWAGLRTFVADRSPVLGQDPEE ESFIWLAALGGYGIQAAPAIARLCAHAALGVAMPKDLAALQLNYQHFSPARCRDEAFARLAVKQVADLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24797151, Length=386, Percent_Identity=23.3160621761658, Blast_Score=82, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42174; Mature: 42042
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARYDFIVVGGGIAGVSAAYELAAHGSVCLLEQEQQLAYHTTGRSAAISMESYGNQQIR CCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHEEECCCCEEEEHHHCCCHHHH SLTCASRRFFENPPEGLAEHPLWAPRGALIVAQAARVDKLAARFNAVLAQVPSAKFLDAK HHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHCCHH QVLELVPYLAEGAWSAGIYEPSAFDLDVHGIHGAYLGGLRARGGVVKRESEVLRGERRAG HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHCCHHHCCCCCCCHHHHHHCCCCCC HWTLHTADGQQLQAAIVVNAAGAWADELAERCGVPKVGVRPLRRTVLAVDPQCDVHHTPY CEEEECCCCCEEEEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCCCC LGTVDEDIFIKPEAGRLIVSPCDESPSLPCDALPEELDLAITMDRLQNTTRLRPRSIINK CCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHEEEHHHHCCHHCCCHHHHHHH WAGLRTFVADRSPVLGQDPEEESFIWLAALGGYGIQAAPAIARLCAHAALGVAMPKDLAA HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEE LQLNYQHFSPARCRDEAFARLAVKQVADLH EEECCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TARYDFIVVGGGIAGVSAAYELAAHGSVCLLEQEQQLAYHTTGRSAAISMESYGNQQIR CCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCHHHEEECCCCEEEEHHHCCCHHHH SLTCASRRFFENPPEGLAEHPLWAPRGALIVAQAARVDKLAARFNAVLAQVPSAKFLDAK HHHHHHHHHCCCCCCHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHCCHH QVLELVPYLAEGAWSAGIYEPSAFDLDVHGIHGAYLGGLRARGGVVKRESEVLRGERRAG HHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHCCHHHCCCCCCCHHHHHHCCCCCC HWTLHTADGQQLQAAIVVNAAGAWADELAERCGVPKVGVRPLRRTVLAVDPQCDVHHTPY CEEEECCCCCEEEEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCCCC LGTVDEDIFIKPEAGRLIVSPCDESPSLPCDALPEELDLAITMDRLQNTTRLRPRSIINK CCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHEEEHHHHCCHHCCCHHHHHHH WAGLRTFVADRSPVLGQDPEEESFIWLAALGGYGIQAAPAIARLCAHAALGVAMPKDLAA HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEE LQLNYQHFSPARCRDEAFARLAVKQVADLH EEECCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA