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The map label for this gene is dapA [H]

Identifier: 77458534

GI number: 77458534

Start: 2661057

End: 2662004

Strand: Reverse

Name: dapA [H]

Synonym: Pfl01_2307

Alternate gene names: 77458534

Gene position: 2662004-2661057 (Counterclockwise)

Preceding gene: 77458535

Following gene: 77458533

Centisome position: 41.35

GC content: 64.56

Gene sequence:

>948_bases
ATGAGCGACAACATCTTCACCGGCTGCATGCCCGCCCTGATGACCCCGTGCACCGCCGCGCGCAAACCGGACTTCGATGC
GCTGGTGGCCAAGGGTCGCGAGCTGATCGACATCGGCATGAGCGCCGTCGTGTACTGCGGCTCCATGGGCGACTGGCCGC
TTCTCACCGAAGCCGAGCGTCAGGAAGGCGTGGCGCGGCTGGTGGCCGCCGGGATTCCGACCATCGTCGGCACTGGCGCG
GTCAACACCCGTGAAGCGGTGTCCCACGCGGCCCATGCGGCGAAGGTCGGCGCGCAGGGTTTGATGGTGATTCCTCGGGT
GCTGTCCCGTGGTGCTTCGGCGGCTGCGCAAAAAGCCCACTTCGCGGCGATTCTGCAAGCCGCGCCGAACCTGCCGGCGG
TGATCTACAACAGCCCTTACTACGGCTTCGCCACCCGCGCCGACCTGTTCTTCGAACTGCGCCGTGAATACCCGAACCTG
ATCGGCTTCAAGGAGTTCGGCGGTGGCGCCGACCTGCGCTACGCCGCTGAAAACATCACCTCCAAGGACGATGCCGTGAC
CCTGATGGTGGGTGTCGACACCCAGGTCGTGCACGGCTTCGTCAACTGCAACGCCACCGGCGCCATCACCGGGATCGGCA
ACGCCCTGCCCCGCGAAGTGCTGCAACTGGTGGCCCTGAGCAAGCAGGCGGCCAAGGGTGACGCCAAGGCCCGACGTCAG
GCCCGTGAGCTGGAATCGGCGCTGGCGGTGCTGTCGTCCTTCGACGAAGGCACGGATCTGGTGCTGTATTACAAACACCT
GATGGTGCTCAACGGCGACAAGGAATACACCCTGCATTTCAACGAAACCGATGCCTTGAGCGACTCGCAACGCCGTTACG
CGGAAGCCCAGTACGCGCTGTTCCGTCACTGGTACGAAAACTGGTCGGCGCAGCAGAACTTCGCCTGA

Upstream 100 bases:

>100_bases
ACGCTGCTGATCGACGAAACCGATCCGTTCGCGTGGGGCATCTGAGCCGCTGCGCTGTTTTTTCAACCCCCTCTGAAAGA
CCGTTCCAAGGAGAACAATA

Downstream 100 bases:

>100_bases
CCTGCCGCCCCGCTCAAGCCCGCCGCCCCGCGGCGGCGGGCCTTATTCGTGACCTGCTTTATTGATAAGGAATGCGCCAT
GACTCTGACGGGCCAACTGC

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSDNIFTGCMPALMTPCTAARKPDFDALVAKGRELIDIGMSAVVYCGSMGDWPLLTEAERQEGVARLVAAGIPTIVGTGA
VNTREAVSHAAHAAKVGAQGLMVIPRVLSRGASAAAQKAHFAAILQAAPNLPAVIYNSPYYGFATRADLFFELRREYPNL
IGFKEFGGGADLRYAAENITSKDDAVTLMVGVDTQVVHGFVNCNATGAITGIGNALPREVLQLVALSKQAAKGDAKARRQ
ARELESALAVLSSFDEGTDLVLYYKHLMVLNGDKEYTLHFNETDALSDSQRRYAEAQYALFRHWYENWSAQQNFA

Sequences:

>Translated_315_residues
MSDNIFTGCMPALMTPCTAARKPDFDALVAKGRELIDIGMSAVVYCGSMGDWPLLTEAERQEGVARLVAAGIPTIVGTGA
VNTREAVSHAAHAAKVGAQGLMVIPRVLSRGASAAAQKAHFAAILQAAPNLPAVIYNSPYYGFATRADLFFELRREYPNL
IGFKEFGGGADLRYAAENITSKDDAVTLMVGVDTQVVHGFVNCNATGAITGIGNALPREVLQLVALSKQAAKGDAKARRQ
ARELESALAVLSSFDEGTDLVLYYKHLMVLNGDKEYTLHFNETDALSDSQRRYAEAQYALFRHWYENWSAQQNFA
>Mature_314_residues
SDNIFTGCMPALMTPCTAARKPDFDALVAKGRELIDIGMSAVVYCGSMGDWPLLTEAERQEGVARLVAAGIPTIVGTGAV
NTREAVSHAAHAAKVGAQGLMVIPRVLSRGASAAAQKAHFAAILQAAPNLPAVIYNSPYYGFATRADLFFELRREYPNLI
GFKEFGGGADLRYAAENITSKDDAVTLMVGVDTQVVHGFVNCNATGAITGIGNALPREVLQLVALSKQAAKGDAKARRQA
RELESALAVLSSFDEGTDLVLYYKHLMVLNGDKEYTLHFNETDALSDSQRRYAEAQYALFRHWYENWSAQQNFA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=253, Percent_Identity=28.8537549407115, Blast_Score=72, Evalue=4e-13,
Organism=Escherichia coli, GI1786463, Length=274, Percent_Identity=26.6423357664234, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 34041; Mature: 33910

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNIFTGCMPALMTPCTAARKPDFDALVAKGRELIDIGMSAVVYCGSMGDWPLLTEAER
CCCCCCHHHHHHHHCCCHHCCCCCHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCHHHH
QEGVARLVAAGIPTIVGTGAVNTREAVSHAAHAAKVGAQGLMVIPRVLSRGASAAAQKAH
HHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
FAAILQAAPNLPAVIYNSPYYGFATRADLFFELRREYPNLIGFKEFGGGADLRYAAENIT
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCC
SKDDAVTLMVGVDTQVVHGFVNCNATGAITGIGNALPREVLQLVALSKQAAKGDAKARRQ
CCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
ARELESALAVLSSFDEGTDLVLYYKHLMVLNGDKEYTLHFNETDALSDSQRRYAEAQYAL
HHHHHHHHHHHHHCCCCCCHHEEEEEHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH
FRHWYENWSAQQNFA
HHHHHHCCCCCCCCC
>Mature Secondary Structure 
SDNIFTGCMPALMTPCTAARKPDFDALVAKGRELIDIGMSAVVYCGSMGDWPLLTEAER
CCCCCHHHHHHHHCCCHHCCCCCHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCHHHH
QEGVARLVAAGIPTIVGTGAVNTREAVSHAAHAAKVGAQGLMVIPRVLSRGASAAAQKAH
HHHHHHHHHHCCCHHEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHH
FAAILQAAPNLPAVIYNSPYYGFATRADLFFELRREYPNLIGFKEFGGGADLRYAAENIT
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHCC
SKDDAVTLMVGVDTQVVHGFVNCNATGAITGIGNALPREVLQLVALSKQAAKGDAKARRQ
CCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
ARELESALAVLSSFDEGTDLVLYYKHLMVLNGDKEYTLHFNETDALSDSQRRYAEAQYAL
HHHHHHHHHHHHHCCCCCCHHEEEEEHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHHH
FRHWYENWSAQQNFA
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]