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The map label for this gene is xylA

Identifier: 77458530

GI number: 77458530

Start: 2655445

End: 2656761

Strand: Reverse

Name: xylA

Synonym: Pfl01_2303

Alternate gene names: 77458530

Gene position: 2656761-2655445 (Counterclockwise)

Preceding gene: 77458532

Following gene: 77458529

Centisome position: 41.26

GC content: 60.36

Gene sequence:

>1317_bases
ATGCCGTACTTCCCCGATATCGAGCGGATCCGCTACGAAGGTCCTGCCAGCGATTCTCCACTTGCCTTCCGCCACTACGA
CGCCGACAAGATCATCCTCGGCAAGCCCATGCGCGAACATCTGCGCATGGCCGCCTGTTATTGGCACACCTTTGTCTGGC
CGGGCTCCGACGTGTTCGGCGCCGGGACGTTCAAGCGCCCGTGGCAACACGCCGGTGACCCGATGGAGCTGGCCATCGGC
AAGGCGCAGGCCGCGTTCGAGTTTTTCTCCAAGCTGGGTATCGATTACTACTGCTTTCATGACACGGATGTCGCCCCCGA
AGGCAATTCGCTGAAGGAGTACCGCAACCACTTCGCACAGATGATCGATCACCTGGAACGCCATCAGGAAGAAAGCGGGA
TCAAGCTGCTGTGGGGCACCGCCAACTGCTTCAGCAATCCGCGCTTTGCCGCCGGTGCCGCCAGCAACCCGGATCCTGAA
GTGTTCGCCTGCGCTGCCGCCCAGGTCTTCAGCGCCATGAACGCCACTCAACGCCTCAAGGGCGCCAACTATGTGTTGTG
GGGCGGTCGCGAGGGCTACGAAACCCTGCTCAACACCGACTTGAAACGCGAGCGCGAACAACTGGGCCGCTTCATGCGCA
TGGTGGTCGAGCACAAATACAAGATCGGCTTCAAAGGTGACCTGCTGATCGAGCCCAAACCGCAGGAACCGACCAAGCAC
CAGTACGATTACGACAGCGCCACCGTGTTCGGTTTTCTCCAGCAGTTCGGTCTGGAAAAGGAAATCAAGGTCAACATCGA
GGCCAACCACGCCACTCTGGCCGGTCATAGTTTTCATCACGAAGTGGCGACGGCCGTCTCGCTGGGGATTTTCGGCAGCA
TCGACGCCAACCGGGGCGACCCGCAAAACGGCTGGGACACCGATCAATTCCCCAACAGCGTCGAGGAAATGACCCTCGTC
ACTTATGAAATCCTCAAGGCCGGCGGGTTCGGCAATGGCGGGTTCAACTTCGATTCCAAGGTGCGCCGCCAGAGCCTCGA
TGAGACCGATCTGTTCCACGGTCACGTCGGTGCCATGGACGTCCTCGCCCTGTCGCTCGAGCGGGCCGCCGCCATGGTCC
AGAACGATCAGCTGCAACGGCTCAAGGACCAACGCTATGCCGGCTGGCAGCAGCCCTTCGGCCAGTCGGTGCTGGCAGGC
GACTTCAATCTCCAGTCCCTGGCCGAGCACGCCTTTGCCAACGAATTGAACCCACAGGCCGTCAGCGGTCGGCAGGAAAT
GCTCGAAAACGTCGTCAACCGGTTTATCTATCGCTGA

Upstream 100 bases:

>100_bases
CACTGCGTGTTGGTGATTTTCGTAATCGGCAGGCACAGGGCCGTTGCTAGTATCGGGACACGCCCAAGAACAACAACCAA
GAACAACAAGGACATTGCCA

Downstream 100 bases:

>100_bases
TCGCCAATGGGGACCGCGGGCGCTGTGACATTTGCGCGACAAATCTGTAGTCCGTTTCGCCTACTGATTCTCTACAGTTC
CACCAGCCCGATATTCATCG

Product: xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MPYFPDIERIRYEGPASDSPLAFRHYDADKIILGKPMREHLRMAACYWHTFVWPGSDVFGAGTFKRPWQHAGDPMELAIG
KAQAAFEFFSKLGIDYYCFHDTDVAPEGNSLKEYRNHFAQMIDHLERHQEESGIKLLWGTANCFSNPRFAAGAASNPDPE
VFACAAAQVFSAMNATQRLKGANYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKYKIGFKGDLLIEPKPQEPTKH
QYDYDSATVFGFLQQFGLEKEIKVNIEANHATLAGHSFHHEVATAVSLGIFGSIDANRGDPQNGWDTDQFPNSVEEMTLV
TYEILKAGGFGNGGFNFDSKVRRQSLDETDLFHGHVGAMDVLALSLERAAAMVQNDQLQRLKDQRYAGWQQPFGQSVLAG
DFNLQSLAEHAFANELNPQAVSGRQEMLENVVNRFIYR

Sequences:

>Translated_438_residues
MPYFPDIERIRYEGPASDSPLAFRHYDADKIILGKPMREHLRMAACYWHTFVWPGSDVFGAGTFKRPWQHAGDPMELAIG
KAQAAFEFFSKLGIDYYCFHDTDVAPEGNSLKEYRNHFAQMIDHLERHQEESGIKLLWGTANCFSNPRFAAGAASNPDPE
VFACAAAQVFSAMNATQRLKGANYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKYKIGFKGDLLIEPKPQEPTKH
QYDYDSATVFGFLQQFGLEKEIKVNIEANHATLAGHSFHHEVATAVSLGIFGSIDANRGDPQNGWDTDQFPNSVEEMTLV
TYEILKAGGFGNGGFNFDSKVRRQSLDETDLFHGHVGAMDVLALSLERAAAMVQNDQLQRLKDQRYAGWQQPFGQSVLAG
DFNLQSLAEHAFANELNPQAVSGRQEMLENVVNRFIYR
>Mature_437_residues
PYFPDIERIRYEGPASDSPLAFRHYDADKIILGKPMREHLRMAACYWHTFVWPGSDVFGAGTFKRPWQHAGDPMELAIGK
AQAAFEFFSKLGIDYYCFHDTDVAPEGNSLKEYRNHFAQMIDHLERHQEESGIKLLWGTANCFSNPRFAAGAASNPDPEV
FACAAAQVFSAMNATQRLKGANYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKYKIGFKGDLLIEPKPQEPTKHQ
YDYDSATVFGFLQQFGLEKEIKVNIEANHATLAGHSFHHEVATAVSLGIFGSIDANRGDPQNGWDTDQFPNSVEEMTLVT
YEILKAGGFGNGGFNFDSKVRRQSLDETDLFHGHVGAMDVLALSLERAAAMVQNDQLQRLKDQRYAGWQQPFGQSVLAGD
FNLQSLAEHAFANELNPQAVSGRQEMLENVVNRFIYR

Specific function: Unknown

COG id: COG2115

COG function: function code G; Xylose isomerase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family

Homologues:

Organism=Escherichia coli, GI1789988, Length=435, Percent_Identity=68.2758620689655, Blast_Score=645, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): XYLA_PSEPF (Q3KDW0)

Other databases:

- EMBL:   CP000094
- RefSeq:   YP_348035.1
- ProteinModelPortal:   Q3KDW0
- SMR:   Q3KDW0
- STRING:   Q3KDW0
- GeneID:   3715586
- GenomeReviews:   CP000094_GR
- KEGG:   pfo:Pfl01_2303
- eggNOG:   COG2115
- HOGENOM:   HBG297199
- OMA:   LLGWDTD
- ProtClustDB:   PRK05474
- BioCyc:   PFLU205922:PFL_2303-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00455
- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013452
- InterPro:   IPR001998
- Gene3D:   G3DSA:3.20.20.150
- PRINTS:   PR00688
- TIGRFAMs:   TIGR02630

Pfam domain/function: PF01261 AP_endonuc_2; SSF51658 Xyl_isomerase-like_TIM-brl

EC number: =5.3.1.5

Molecular weight: Translated: 49447; Mature: 49316

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS51415 XYLOSE_ISOMERASE; PS00172 XYLOSE_ISOMERASE_1 ; PS00173 XYLOSE_ISOMERASE_2

Important sites: ACT_SITE 100-100 ACT_SITE 103-103

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYFPDIERIRYEGPASDSPLAFRHYDADKIILGKPMREHLRMAACYWHTFVWPGSDVFG
CCCCCCHHHEEECCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCCC
AGTFKRPWQHAGDPMELAIGKAQAAFEFFSKLGIDYYCFHDTDVAPEGNSLKEYRNHFAQ
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHH
MIDHLERHQEESGIKLLWGTANCFSNPRFAAGAASNPDPEVFACAAAQVFSAMNATQRLK
HHHHHHHHHHCCCCEEEEECHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GANYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKYKIGFKGDLLIEPKPQEPTKH
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
QYDYDSATVFGFLQQFGLEKEIKVNIEANHATLAGHSFHHEVATAVSLGIFGSIDANRGD
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHEECCCCCCCC
PQNGWDTDQFPNSVEEMTLVTYEILKAGGFGNGGFNFDSKVRRQSLDETDLFHGHVGAMD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCHHHH
VLALSLERAAAMVQNDQLQRLKDQRYAGWQQPFGQSVLAGDFNLQSLAEHAFANELNPQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCHH
VSGRQEMLENVVNRFIYR
HCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PYFPDIERIRYEGPASDSPLAFRHYDADKIILGKPMREHLRMAACYWHTFVWPGSDVFG
CCCCCHHHEEECCCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCCC
AGTFKRPWQHAGDPMELAIGKAQAAFEFFSKLGIDYYCFHDTDVAPEGNSLKEYRNHFAQ
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHH
MIDHLERHQEESGIKLLWGTANCFSNPRFAAGAASNPDPEVFACAAAQVFSAMNATQRLK
HHHHHHHHHHCCCCEEEEECHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GANYVLWGGREGYETLLNTDLKREREQLGRFMRMVVEHKYKIGFKGDLLIEPKPQEPTKH
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC
QYDYDSATVFGFLQQFGLEKEIKVNIEANHATLAGHSFHHEVATAVSLGIFGSIDANRGD
CCCCCHHHHHHHHHHHCCCCEEEEEEEECCEEECCCHHHHHHHHHHHHHHEECCCCCCCC
PQNGWDTDQFPNSVEEMTLVTYEILKAGGFGNGGFNFDSKVRRQSLDETDLFHGHVGAMD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHCCCCHHHH
VLALSLERAAAMVQNDQLQRLKDQRYAGWQQPFGQSVLAGDFNLQSLAEHAFANELNPQA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHCCCCHH
VSGRQEMLENVVNRFIYR
HCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA