| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is cya3 [H]
Identifier: 77458503
GI number: 77458503
Start: 2626724
End: 2628292
Strand: Direct
Name: cya3 [H]
Synonym: Pfl01_2276
Alternate gene names: 77458503
Gene position: 2626724-2628292 (Clockwise)
Preceding gene: 77458497
Following gene: 77458508
Centisome position: 40.8
GC content: 64.12
Gene sequence:
>1569_bases GTGCAATTCGTGTTTGAAGACTACGTGCTCGACCAGCAGCGCCGGGAACTGACCTGGCGCGGGCAAGTCGTGACTGTCGG GCCGCAGGTCTTCGACTTGCTGCTGCTATTGGTCAGCAACCGCGAGCGGGTGGTGAGCAAGGACGAACTGTTGAGCGCCG TATGGAGTGGCCGGATCGTTTCCGAATCGACCATCACCAGCCACATCAACGCTGTGCGCAAGGCCATCGGCGACACCGGT GAGCAGCAGCGCCTGGTGCGTACGGTGCCGCGCAAGGGCTATCGCTTCGTCGGCGAAATCAGCCCGTGCGACAGCCCCGT CAATGCACCGGAAGCGCCTGCGAAACTCGAAGTGGCCACGACACTTGTCCTGCCGGAAAAACCTTCGATCACCGTCCTGC CGTTCCAGAACCTCAGTGGAGACCCCGAGCAGGACTATTTCGCCGACGGCATCGTCGAAGACATCATCACTGCGTTGTCG CGCCTGCGCTGGCTGTTCGTCATCGCCCGCAACTCCAGTTTCACCTACAAGGGCAGGGCGGTGGATGCGCGGGGCGTCGG GCAGGAACTGGGCGTGCGTTACGTGCTGGAAGGCAGCGTGCGCAAGTGCGGCAACAAGATCCGCATCACCGGCCAGTTGA TTGATGCGTGCAGCGGCACGCACCTGTGGGCCGAGCGCTTCGAAGGCCTGCTCGATGATATTTTCGAACTTCAGGATCAA GTGGCCGAGAGCGTTGTGGGCGCCATCGCGCCGCAGCTGGAGCGCGCGGAAATCGAGCGGGCCAAACGCAAGCCCACCGA CAGCCTCGATGCCTACGATTACTATCTGCGAGGGACGGCCAAGCTGCACATCGGCACCCGTGAGTCGATCGAACAGGCGC TGGCGCTGTTCTACCGGGCAATCGAGCTGGATCCGGAATTCGCCTCGGCATACGGCATGGCCGCGTGGTGCCACTTCTGG CGCAAGCTCAACGGCTGGATGACCGACCGGCCCCGGGACGTCGCCGAAGGTGCGCGGCTGGCGCGCATGGGCGTGGAACT GGGGCGCGATGACGCCGTGGCGCTGACCCGCTGCGGTCATGCCCTGGCCCATCTGACCGGGGATGTCGATTGTGGCATTG CTTTGCTGGATCGGGCTCGAGTGCTCAACCCCAATCTGGCGCCGGCCTGGTATCTCGGCGGTATCCTGCGCGCCTTGGAT GGCGAAACCGAAGCCGCCATTGCCAACCTCGAGCATGCCGTGCGCCTGAGCCCTGTGGACCCGGAAATGTTCCGCATGCA GGTCGGGATGGCGTTGGCGCACTTCTTCGCCGGTCGCTTCGAATGTTCGGTTTCCTGGGCCGAGAAAGCGCAGGGAAACC TGCCCAGTCTGCTGGTAGCGGCGGCCCTGATCGCCGCCAGCCACGCGCTCAATGGGCGAACCGACAAAGCCAAGCAGGCC ATGGAACGGCTGCGTCAGCTGGACCCGACGTTGCGGGTGTCCAGCCTGGGCGCGTGGCTGCCCATTCAACGGCCTGAAGA CGTTGCCCGGTTTGCCGAAGGTTTGCGGTTGGCGGGGTTGCCGGAGTAA
Upstream 100 bases:
>100_bases GACCGGTGCGACCGCCCGAGGTCTGCCGTATGATCGAGCGCAAAACAATCGCCTGCCCGGACACGGCGTCGGGGGGGCGC CAGACCAGAGAACAGCCACC
Downstream 100 bases:
>100_bases GGGCTCAGTCAGCCAATCAATCCATCGAAAAATGCATTCGCATGTTCATCGCGGCATCGTACTGATTGCTGGCTACCCGG CGTTCGATCAGGCGATCTGA
Product: transcriptional regulatory protein-like
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MQFVFEDYVLDQQRRELTWRGQVVTVGPQVFDLLLLLVSNRERVVSKDELLSAVWSGRIVSESTITSHINAVRKAIGDTG EQQRLVRTVPRKGYRFVGEISPCDSPVNAPEAPAKLEVATTLVLPEKPSITVLPFQNLSGDPEQDYFADGIVEDIITALS RLRWLFVIARNSSFTYKGRAVDARGVGQELGVRYVLEGSVRKCGNKIRITGQLIDACSGTHLWAERFEGLLDDIFELQDQ VAESVVGAIAPQLERAEIERAKRKPTDSLDAYDYYLRGTAKLHIGTRESIEQALALFYRAIELDPEFASAYGMAAWCHFW RKLNGWMTDRPRDVAEGARLARMGVELGRDDAVALTRCGHALAHLTGDVDCGIALLDRARVLNPNLAPAWYLGGILRALD GETEAAIANLEHAVRLSPVDPEMFRMQVGMALAHFFAGRFECSVSWAEKAQGNLPSLLVAAALIAASHALNGRTDKAKQA MERLRQLDPTLRVSSLGAWLPIQRPEDVARFAEGLRLAGLPE
Sequences:
>Translated_522_residues MQFVFEDYVLDQQRRELTWRGQVVTVGPQVFDLLLLLVSNRERVVSKDELLSAVWSGRIVSESTITSHINAVRKAIGDTG EQQRLVRTVPRKGYRFVGEISPCDSPVNAPEAPAKLEVATTLVLPEKPSITVLPFQNLSGDPEQDYFADGIVEDIITALS RLRWLFVIARNSSFTYKGRAVDARGVGQELGVRYVLEGSVRKCGNKIRITGQLIDACSGTHLWAERFEGLLDDIFELQDQ VAESVVGAIAPQLERAEIERAKRKPTDSLDAYDYYLRGTAKLHIGTRESIEQALALFYRAIELDPEFASAYGMAAWCHFW RKLNGWMTDRPRDVAEGARLARMGVELGRDDAVALTRCGHALAHLTGDVDCGIALLDRARVLNPNLAPAWYLGGILRALD GETEAAIANLEHAVRLSPVDPEMFRMQVGMALAHFFAGRFECSVSWAEKAQGNLPSLLVAAALIAASHALNGRTDKAKQA MERLRQLDPTLRVSSLGAWLPIQRPEDVARFAEGLRLAGLPE >Mature_522_residues MQFVFEDYVLDQQRRELTWRGQVVTVGPQVFDLLLLLVSNRERVVSKDELLSAVWSGRIVSESTITSHINAVRKAIGDTG EQQRLVRTVPRKGYRFVGEISPCDSPVNAPEAPAKLEVATTLVLPEKPSITVLPFQNLSGDPEQDYFADGIVEDIITALS RLRWLFVIARNSSFTYKGRAVDARGVGQELGVRYVLEGSVRKCGNKIRITGQLIDACSGTHLWAERFEGLLDDIFELQDQ VAESVVGAIAPQLERAEIERAKRKPTDSLDAYDYYLRGTAKLHIGTRESIEQALALFYRAIELDPEFASAYGMAAWCHFW RKLNGWMTDRPRDVAEGARLARMGVELGRDDAVALTRCGHALAHLTGDVDCGIALLDRARVLNPNLAPAWYLGGILRALD GETEAAIANLEHAVRLSPVDPEMFRMQVGMALAHFFAGRFECSVSWAEKAQGNLPSLLVAAALIAASHALNGRTDKAKQA MERLRQLDPTLRVSSLGAWLPIQRPEDVARFAEGLRLAGLPE
Specific function: Required For Pcad Induction, A Promoter Upstream Of Cadb That Is Responsible For The Ph-Regulated Expression Of Cada. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 57768; Mature: 57768
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVFEDYVLDQQRRELTWRGQVVTVGPQVFDLLLLLVSNRERVVSKDELLSAVWSGRIV CCCCHHHHHHHHHHHHHEECCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC SESTITSHINAVRKAIGDTGEQQRLVRTVPRKGYRFVGEISPCDSPVNAPEAPAKLEVAT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEE TLVLPEKPSITVLPFQNLSGDPEQDYFADGIVEDIITALSRLRWLFVIARNSSFTYKGRA EEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEECCCE VDARGVGQELGVRYVLEGSVRKCGNKIRITGQLIDACSGTHLWAERFEGLLDDIFELQDQ ECCCCCCHHHCEEEEEECCHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VAESVVGAIAPQLERAEIERAKRKPTDSLDAYDYYLRGTAKLHIGTRESIEQALALFYRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECEEEEECCCHHHHHHHHHHHHHH IELDPEFASAYGMAAWCHFWRKLNGWMTDRPRDVAEGARLARMGVELGRDDAVALTRCGH HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ALAHLTGDVDCGIALLDRARVLNPNLAPAWYLGGILRALDGETEAAIANLEHAVRLSPVD HHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCC PEMFRMQVGMALAHFFAGRFECSVSWAEKAQGNLPSLLVAAALIAASHALNGRTDKAKQA HHHHHHHHHHHHHHHHHCHHEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH MERLRQLDPTLRVSSLGAWLPIQRPEDVARFAEGLRLAGLPE HHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQFVFEDYVLDQQRRELTWRGQVVTVGPQVFDLLLLLVSNRERVVSKDELLSAVWSGRIV CCCCHHHHHHHHHHHHHEECCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC SESTITSHINAVRKAIGDTGEQQRLVRTVPRKGYRFVGEISPCDSPVNAPEAPAKLEVAT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEE TLVLPEKPSITVLPFQNLSGDPEQDYFADGIVEDIITALSRLRWLFVIARNSSFTYKGRA EEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCEEECCCE VDARGVGQELGVRYVLEGSVRKCGNKIRITGQLIDACSGTHLWAERFEGLLDDIFELQDQ ECCCCCCHHHCEEEEEECCHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VAESVVGAIAPQLERAEIERAKRKPTDSLDAYDYYLRGTAKLHIGTRESIEQALALFYRA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECEEEEECCCHHHHHHHHHHHHHH IELDPEFASAYGMAAWCHFWRKLNGWMTDRPRDVAEGARLARMGVELGRDDAVALTRCGH HHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ALAHLTGDVDCGIALLDRARVLNPNLAPAWYLGGILRALDGETEAAIANLEHAVRLSPVD HHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCC PEMFRMQVGMALAHFFAGRFECSVSWAEKAQGNLPSLLVAAALIAASHALNGRTDKAKQA HHHHHHHHHHHHHHHHHCHHEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH MERLRQLDPTLRVSSLGAWLPIQRPEDVARFAEGLRLAGLPE HHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]