| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458426
Identifier: 77458426
GI number: 77458426
Start: 2481857
End: 2482654
Strand: Direct
Name: 77458426
Synonym: Pfl01_2199
Alternate gene names: NA
Gene position: 2481857-2482654 (Clockwise)
Preceding gene: 77458425
Following gene: 77458427
Centisome position: 38.55
GC content: 62.16
Gene sequence:
>798_bases ATGTCGGCGCGCCTGGACGGGCCGAACGTGCAATACGCGTTTCGTCTGGATGACGTCGAGGTGCCGGTCAACCCGTTGAT CGGCAGCACGGTGCGTCTGGAATACCTGGGGGCGATCCACTGCACCCATTGCGGGCGCAAGACCAAGACCAGTTTCAGTC AGGGTTACTGCTATCCGTGCATGACCAAACTCGCCCAGTGCGACATTTGCATCATGAGCCCGGAGCGCTGTCACTTCGAG GCCGGCACCTGCCGTGAGCCGGAGTGGGGCGAGAAATTCTGCATGACCGACCACATCGTCTACCTGGCCAATTCGTCGGG GATCAAGGTCGGCATCACCCGCGCCACCCAGTTGCCGACCCGCTGGCTCGATCAGGGCGCCAGTCAGGCGCTGCCGATCA TGCGCGTTTCGACGCGGCAGCAGTCGGGCTTCGTCGAAGACCTGTTCCGCAGCCAGGTGGCGGACAAGACCAACTGGCGC GCCTTGCTCAAGGGCGATGCGGCGGCGGTGGATCTGGCGCAGGTGCGCGATCAACTGTTCGAAAGCTGCGCCCCGGGCCT GCAAGGTTTGCAGGAGCGTTTCGGCCTCCAGGCCATTCAAACCATCGCCGATGTCGAGCCGCTGGAAATCCGCTACCCGG TCGAGCAGTACCCGGCCAAGATTGTCAGCTTCAACCTGGACAAGAACCCGATTGCCGAAGGCACGCTGCTGGGGATCAAG GGCCAGTACCTGATCTTCGACACCGGCGTGATCAACATTCGCAAGTACACGGCCTATCAGCTCGCCGTGCATCAATAA
Upstream 100 bases:
>100_bases GCCCGCAGGAATGTGCGTCGAAGTCGATCGAAGTGCCTAACATCCTGTTCAAGTCGGACGCCCTCCATTGATCGAGATCG GCCGCGGTGCAATCAGCAAA
Downstream 100 bases:
>100_bases GGACTTCAGCATGCGCACCGAACAACCGAAGATGATTTACCTGAAGGACTATCAGGCGCCCGAGTACCTGATCGATGAAA CACACCTGACCTTCGAGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSARLDGPNVQYAFRLDDVEVPVNPLIGSTVRLEYLGAIHCTHCGRKTKTSFSQGYCYPCMTKLAQCDICIMSPERCHFE AGTCREPEWGEKFCMTDHIVYLANSSGIKVGITRATQLPTRWLDQGASQALPIMRVSTRQQSGFVEDLFRSQVADKTNWR ALLKGDAAAVDLAQVRDQLFESCAPGLQGLQERFGLQAIQTIADVEPLEIRYPVEQYPAKIVSFNLDKNPIAEGTLLGIK GQYLIFDTGVINIRKYTAYQLAVHQ
Sequences:
>Translated_265_residues MSARLDGPNVQYAFRLDDVEVPVNPLIGSTVRLEYLGAIHCTHCGRKTKTSFSQGYCYPCMTKLAQCDICIMSPERCHFE AGTCREPEWGEKFCMTDHIVYLANSSGIKVGITRATQLPTRWLDQGASQALPIMRVSTRQQSGFVEDLFRSQVADKTNWR ALLKGDAAAVDLAQVRDQLFESCAPGLQGLQERFGLQAIQTIADVEPLEIRYPVEQYPAKIVSFNLDKNPIAEGTLLGIK GQYLIFDTGVINIRKYTAYQLAVHQ >Mature_264_residues SARLDGPNVQYAFRLDDVEVPVNPLIGSTVRLEYLGAIHCTHCGRKTKTSFSQGYCYPCMTKLAQCDICIMSPERCHFEA GTCREPEWGEKFCMTDHIVYLANSSGIKVGITRATQLPTRWLDQGASQALPIMRVSTRQQSGFVEDLFRSQVADKTNWRA LLKGDAAAVDLAQVRDQLFESCAPGLQGLQERFGLQAIQTIADVEPLEIRYPVEQYPAKIVSFNLDKNPIAEGTLLGIKG QYLIFDTGVINIRKYTAYQLAVHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29599; Mature: 29468
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARLDGPNVQYAFRLDDVEVPVNPLIGSTVRLEYLGAIHCTHCGRKTKTSFSQGYCYPC CCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHH MTKLAQCDICIMSPERCHFEAGTCREPEWGEKFCMTDHIVYLANSSGIKVGITRATQLPT HHHHHHCCEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECHHHCCH RWLDQGASQALPIMRVSTRQQSGFVEDLFRSQVADKTNWRALLKGDAAAVDLAQVRDQLF HHHHCCCCCCCCEEEECCCHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH ESCAPGLQGLQERFGLQAIQTIADVEPLEIRYPVEQYPAKIVSFNLDKNPIAEGTLLGIK HHHCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCEEEEEECCCCCCCCCEEEEEC GQYLIFDTGVINIRKYTAYQLAVHQ CCEEEEECCEEEEEEEEEEEEEECC >Mature Secondary Structure SARLDGPNVQYAFRLDDVEVPVNPLIGSTVRLEYLGAIHCTHCGRKTKTSFSQGYCYPC CCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCHHH MTKLAQCDICIMSPERCHFEAGTCREPEWGEKFCMTDHIVYLANSSGIKVGITRATQLPT HHHHHHCCEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECHHHCCH RWLDQGASQALPIMRVSTRQQSGFVEDLFRSQVADKTNWRALLKGDAAAVDLAQVRDQLF HHHHCCCCCCCCEEEECCCHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHH ESCAPGLQGLQERFGLQAIQTIADVEPLEIRYPVEQYPAKIVSFNLDKNPIAEGTLLGIK HHHCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCCEEEEEECCCCCCCCCEEEEEC GQYLIFDTGVINIRKYTAYQLAVHQ CCEEEEECCEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA