| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
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The map label for this gene is 77458398
Identifier: 77458398
GI number: 77458398
Start: 2452607
End: 2452999
Strand: Direct
Name: 77458398
Synonym: Pfl01_2171
Alternate gene names: NA
Gene position: 2452607-2452999 (Clockwise)
Preceding gene: 77458395
Following gene: 77458400
Centisome position: 38.09
GC content: 62.09
Gene sequence:
>393_bases ATGGATCGATTGACCGGCGGTTGTCTCTGCGGCGAAGTGCGCATCGAGGCGTCAGGGCGACCCTACAGGGTTGGCGTTTG TCACTGTCTGGATTGCCGCAAACACCAGGGCGCGCTGTTTGCCGCGTCGGCGATCTTTCCCGAGGACGCGGTGACGATCA GCGGCGAAACCCATGACTATGCGGGGCGACATTTCTGCCCGCGCTGTGGTTCGTCGGTGTTCGGCCGCAGTGGCGATGAA GTGGAGGTGAATCTGGGGGCGCTGGATGCACCGGATCAATTCCAGCCCACCTACGAGCTGTGGACCCTGCGTCGCGAGTC GTGGTTACCGGCTTTTCCATTGGCCAGACACTACGTGCGCGATCGCGAGAGAACGGGGCGAACCGAAGAATAG
Upstream 100 bases:
>100_bases GGTCTGCCTGAGTAGTATTAATGGGCCACGATTGTAAGCGTTCCCCCTTTGGGCTGCTATTTTCACTCACCGGATATTCC ATTTTCAGACGAGGTGTCCC
Downstream 100 bases:
>100_bases CCGGGGTCAGGCAGGGCGCCTGACCCCGGCCACTATCAGCCGCGAATGAACGCCAGCAGATCCGCGTTGATCGTCGGCGC CTCGGTGGTCGGCATCCCGT
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein; Lipoprotein
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDRLTGGCLCGEVRIEASGRPYRVGVCHCLDCRKHQGALFAASAIFPEDAVTISGETHDYAGRHFCPRCGSSVFGRSGDE VEVNLGALDAPDQFQPTYELWTLRRESWLPAFPLARHYVRDRERTGRTEE
Sequences:
>Translated_130_residues MDRLTGGCLCGEVRIEASGRPYRVGVCHCLDCRKHQGALFAASAIFPEDAVTISGETHDYAGRHFCPRCGSSVFGRSGDE VEVNLGALDAPDQFQPTYELWTLRRESWLPAFPLARHYVRDRERTGRTEE >Mature_130_residues MDRLTGGCLCGEVRIEASGRPYRVGVCHCLDCRKHQGALFAASAIFPEDAVTISGETHDYAGRHFCPRCGSSVFGRSGDE VEVNLGALDAPDQFQPTYELWTLRRESWLPAFPLARHYVRDRERTGRTEE
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14560; Mature: 14560
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLTGGCLCGEVRIEASGRPYRVGVCHCLDCRKHQGALFAASAIFPEDAVTISGETHDY CCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEECCCCCCC AGRHFCPRCGSSVFGRSGDEVEVNLGALDAPDQFQPTYELWTLRRESWLPAFPLARHYVR CCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHHHEEHHCCCCCCCHHHHHHHH DRERTGRTEE HHHHCCCCCC >Mature Secondary Structure MDRLTGGCLCGEVRIEASGRPYRVGVCHCLDCRKHQGALFAASAIFPEDAVTISGETHDY CCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEECCCCCCC AGRHFCPRCGSSVFGRSGDEVEVNLGALDAPDQFQPTYELWTLRRESWLPAFPLARHYVR CCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCCHHHHEEHHCCCCCCCHHHHHHHH DRERTGRTEE HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA