| Definition | Pseudomonas fluorescens Pf0-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007492 |
| Length | 6,438,405 |
Click here to switch to the map view.
The map label for this gene is 77458390
Identifier: 77458390
GI number: 77458390
Start: 2445985
End: 2446740
Strand: Reverse
Name: 77458390
Synonym: Pfl01_2163
Alternate gene names: NA
Gene position: 2446740-2445985 (Counterclockwise)
Preceding gene: 77458392
Following gene: 77458387
Centisome position: 38.0
GC content: 62.04
Gene sequence:
>756_bases ATGATTCTGATTCTGCTGCCCAGCGCCGATTACGACCCGACCGAAAGCAGCGTGCCCTGGCAGGCGATGCGTAACGCGGG CATCGAAGTTCGTTTTGCCACCCCGCAAGGTTTGCCCGCCCACGCCGACCCACGGTTGGTGGACATCGGTTTCGGCCTGT TGAATTCGATGCTGATGACACGCAAGGCCGATCTGGACAGTTACACGCAGATGATCGAGTCCGAAGCGTTCAGGCAGCCG CTGGCGTATGCCGATGTCGACACGAACCGCTTCGATGGTCTGCTGATCCCCGGCGGGCATGCCAAAGGAATGCGCACGCT GTTGGAATCCACGCAGGCCCAGCAGATTGCCCTGCAATTTTTCAAGGCCGAAAAACCCGTGGCGGCGGTCTGTCATGGCG TGCTGTTGCTGGCGAGGACGCTCGACCCCGACACCGGGCGTTCGGTGTTGTTCGGGCGCAAGGTCACGGCGTTGCTCGCG GCAACCATGGAATTGCCGGCGTGGCTGATGACAGCTGCGTGGCTGGGGCGCTACTACCGCACCTACAAGCAGACCGTTGA AGCGGAGGTGAAAACCGCGCTGGCCCACAAAGCCGACTTCAAACGCGGACCGCTGATCGCCAAACGCGATTGTGCGCAGA AACTGCAATCAGGATTTGTGGTGCGCGACGGCCAACTGCTGACGGCGCGCTGGCCCGGCGACTGCCATCGATTCGCCGCA GAATGGGTGGCCATGTTGCAGGCCCCCCAACGCTGA
Upstream 100 bases:
>100_bases CCGGCGCACGGCAGGCGGTATTGAAGGAAATTACCCCCGCTCGCGCAGACCCACTACGCTCTGGCTATGCGATCACTTTT GACTAGGAAGTCTGCCCTTG
Downstream 100 bases:
>100_bases TCGGTTTTTTCAGTCCAGACGCGGCACGGTGAAGCGGAATTCGCTGCCCTGCCCCGGCTCACTCTCGGCAACGATCTGCC CGCCATGGGCCTCGACGATG
Product: ThiJ/PfpI
Products: NA
Alternate protein names: ThiJ/PfpI; Hsp31/PfpI Family Protein; ThiJ/PfpI-Family Protein
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MILILLPSADYDPTESSVPWQAMRNAGIEVRFATPQGLPAHADPRLVDIGFGLLNSMLMTRKADLDSYTQMIESEAFRQP LAYADVDTNRFDGLLIPGGHAKGMRTLLESTQAQQIALQFFKAEKPVAAVCHGVLLLARTLDPDTGRSVLFGRKVTALLA ATMELPAWLMTAAWLGRYYRTYKQTVEAEVKTALAHKADFKRGPLIAKRDCAQKLQSGFVVRDGQLLTARWPGDCHRFAA EWVAMLQAPQR
Sequences:
>Translated_251_residues MILILLPSADYDPTESSVPWQAMRNAGIEVRFATPQGLPAHADPRLVDIGFGLLNSMLMTRKADLDSYTQMIESEAFRQP LAYADVDTNRFDGLLIPGGHAKGMRTLLESTQAQQIALQFFKAEKPVAAVCHGVLLLARTLDPDTGRSVLFGRKVTALLA ATMELPAWLMTAAWLGRYYRTYKQTVEAEVKTALAHKADFKRGPLIAKRDCAQKLQSGFVVRDGQLLTARWPGDCHRFAA EWVAMLQAPQR >Mature_251_residues MILILLPSADYDPTESSVPWQAMRNAGIEVRFATPQGLPAHADPRLVDIGFGLLNSMLMTRKADLDSYTQMIESEAFRQP LAYADVDTNRFDGLLIPGGHAKGMRTLLESTQAQQIALQFFKAEKPVAAVCHGVLLLARTLDPDTGRSVLFGRKVTALLA ATMELPAWLMTAAWLGRYYRTYKQTVEAEVKTALAHKADFKRGPLIAKRDCAQKLQSGFVVRDGQLLTARWPGDCHRFAA EWVAMLQAPQR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27843; Mature: 27843
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILILLPSADYDPTESSVPWQAMRNAGIEVRFATPQGLPAHADPRLVDIGFGLLNSMLMT CEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH RKADLDSYTQMIESEAFRQPLAYADVDTNRFDGLLIPGGHAKGMRTLLESTQAQQIALQF HHCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH FKAEKPVAAVCHGVLLLARTLDPDTGRSVLFGRKVTALLAATMELPAWLMTAAWLGRYYR HHCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYKQTVEAEVKTALAHKADFKRGPLIAKRDCAQKLQSGFVVRDGQLLTARWPGDCHRFAA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHH EWVAMLQAPQR HHHHHHHCCCC >Mature Secondary Structure MILILLPSADYDPTESSVPWQAMRNAGIEVRFATPQGLPAHADPRLVDIGFGLLNSMLMT CEEEEECCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH RKADLDSYTQMIESEAFRQPLAYADVDTNRFDGLLIPGGHAKGMRTLLESTQAQQIALQF HHCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHH FKAEKPVAAVCHGVLLLARTLDPDTGRSVLFGRKVTALLAATMELPAWLMTAAWLGRYYR HHCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYKQTVEAEVKTALAHKADFKRGPLIAKRDCAQKLQSGFVVRDGQLLTARWPGDCHRFAA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCEEEEEECCCHHHHHHH EWVAMLQAPQR HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA