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The map label for this gene is bphB [H]

Identifier: 77458389

GI number: 77458389

Start: 2443738

End: 2445975

Strand: Direct

Name: bphB [H]

Synonym: Pfl01_2162

Alternate gene names: 77458389

Gene position: 2443738-2445975 (Clockwise)

Preceding gene: 77458388

Following gene: 77458391

Centisome position: 37.96

GC content: 62.2

Gene sequence:

>2238_bases
ATGAACCCGCAAGACAAAGAAGCCTTTGAAGAGTTGCTGGCCAACTGCGCCGACGAGCCGATCCGCTTTCCCGGCGCGAT
CCAGCCGCACGGTTTGCTGCTGACCCTGAGCGAGCCGGACCTTTCGATCATTCAGATCAGCGCCAACGTCGAGACCTTGC
TCGCGCGCCCGGCGCAAGAGCTGATCGGCCAGCCACTGCAAAGCCTGATCGGCGATGCCCATGCCGCGCAGGTTCGCGAA
GCCTTGCAGCAAGCAGCCTTGTCCGATGCGCCGCCGCTGCACTTTCGCCTTAATGGCACGGCGTTCGAAGGCTTGCTGCA
CCGGCATCAGGATGTGCTGATTCTGGAGCTGGAAATCCACGTCGAAAATTTCCAGCCACGCAACGTCGCCGGCACCGAAA
CCCACCTGGGACGGATGCTCGCGCGCCTGCAAAAGGCCCAGAGCCTGCAAGCGCTGTACGACATCAGCGTCAAGGAAATC
CAGGCCATGACCGGTTACGACCGGGTGCTGATTTATCGCTTCGAAGAGGAGGGCCACGGTCAGGTCATCGCCGAAGCGTC
CGATCCGTCGATGGAAGTCTTCAACGGTCTGTTTTTCCCTGCCTCCGACATCCCCGAGCAAGCCCGCGAGCTGTACCGCA
CCAACTGGCTGCGGATCATTCCGAACGCGGACTACCAACCGGTGCCGCTGGTGCCCAAGTTGCGTCCGGACACCCAGACC
CCGCTGGACCTGAGCTTCGCCACGTTGCGCAGCGTGTCGCCGATCCACTGCCAGTACATGAAAAACATGGGCGTGCTGTC
CTCGATGAGCATTTCCCTGCTCAAGGGCGACAAGCTCTGGGGCCTGATCAGTTGCGGCAATCGCCAGCCGCTGCATGTAC
CGCATGAATTGCGCACCGCGTGCCAAACCATCGGCCAGGTGCTGTCGTTGCAGATCAGCGCGATGGAAGCGCTGGAGGTC
AGCCGTCAACGGGAAGAAAAGCTCGAGGCGCTGGCGCTGCTCAATCAGGCGATGATCGACTCGCCACAGAACGTCTTCGA
TGGCCTGGCCAACCAGCCACAAGTCTTGATGGCGCTGGCCAATGCCGGCGGCATTGCGATCATCGAAGACAAGCAATTGC
ACCGTTACGGCAACTGCCCGGAGCCGGAAGAAATCCGCGCCCTGCACAAATGGCTGCAGGAGCGTGGCGAGCCGGTGTTT
GCCAGTCATCACCTGGCCAGCGTCTACCCGCCGGCCGCGCACTACCAGCAGGTCGCCAGCGGCGTGCTCGCCATGAGCCT
GCCCAAACCGGTGGACAACGGCGTGCTGTGGTTCCGCCCCGAAGTCAAAGAGAACATCAACTGGAGCGGCGACCCGCGCA
AGCCGCTGGACCTGGAAAACTCCGACGCCGGCCTGCGCCTGCGGCCGCGTACTTCGTTCGAAATCTGGAAGGTCGAGATG
GCCGGGATTTCCACCAAGTGGAGCCACGGTGATCTGTTCGCCGCCAACGACTTGCGTCGCTCGGCGCTGGAAAATGATCT
GGCCCGCCAAGTACGCCGCGAGCAAGAAGCGGTGCGCGCCCGTGATGAACTGGTGGCGGTGGTTTCCCACGATCTGCGCA
ACCCGATGACCGTGATCTCGATGCTCTGCGGCATGATGCAGAAGGCGTTCAGCTCGGACGGGCCGCACACTTCGCGGCGC
ATCTCGACTGCGATCGACACCATGCAACAAGCCGCCGGGCGCATGAACACGCTGCTGGAAGACTTGCTCGACACCTCGAA
AATAGATGCCGGGCGCTACACCATCGCGCCGCAGAAACTCGATGTCGCGCAGATGTTCGAAGAGGCGCAATCGCTGCTCG
CGCCGCTGGCGCTGGACAAGGACATCAGCATCTCGTTCGAGGCCGATCCTGACCTGAGCATCCATGCCGACCCCGAGCGG
TTGTTTCAGGTGCTGTCGAATCTGGTCGGCAACGCGATCAAGTTCACTCCGCGCCTGGGCACGGTCGACGTGTATGCCAA
ATCGGTCGGTGATGACATCGTCTTCACGGTGCGTGACAGCGGCGAAGGCATTCCCAAGGATCACTTGCCGCACGTATTTG
ACCGTTACTGGACGGTGAAGGAAGGCAATCCGACCGGCACCGGGCTGGGTCTGTACATCACGCAGGGCATCGTCGAGGCC
CATGGCGGGCAGATCGTTGCCGAGAGTGAGCCGGGGCAGGGCAGCGAATTCCGCTTCACCGTGCCGCGTCTGGACTGA

Upstream 100 bases:

>100_bases
GCCGCCCGATGGACGCCGACGAGCGTAAAGCCGTCGTGGCGGCCGCCCACACTACATTCAGTTGTTTCGAGCAGTGGCTC
GAAAGTCAGGAGGTTCTGGT

Downstream 100 bases:

>100_bases
AAAAACCGATCAGCGTTGGGGGGCCTGCAACATGGCCACCCATTCTGCGGCGAATCGATGGCAGTCGCCGGGCCAGCGCG
CCGTCAGCAGTTGGCCGTCG

Product: multi-sensor Signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 745; Mature: 745

Protein sequence:

>745_residues
MNPQDKEAFEELLANCADEPIRFPGAIQPHGLLLTLSEPDLSIIQISANVETLLARPAQELIGQPLQSLIGDAHAAQVRE
ALQQAALSDAPPLHFRLNGTAFEGLLHRHQDVLILELEIHVENFQPRNVAGTETHLGRMLARLQKAQSLQALYDISVKEI
QAMTGYDRVLIYRFEEEGHGQVIAEASDPSMEVFNGLFFPASDIPEQARELYRTNWLRIIPNADYQPVPLVPKLRPDTQT
PLDLSFATLRSVSPIHCQYMKNMGVLSSMSISLLKGDKLWGLISCGNRQPLHVPHELRTACQTIGQVLSLQISAMEALEV
SRQREEKLEALALLNQAMIDSPQNVFDGLANQPQVLMALANAGGIAIIEDKQLHRYGNCPEPEEIRALHKWLQERGEPVF
ASHHLASVYPPAAHYQQVASGVLAMSLPKPVDNGVLWFRPEVKENINWSGDPRKPLDLENSDAGLRLRPRTSFEIWKVEM
AGISTKWSHGDLFAANDLRRSALENDLARQVRREQEAVRARDELVAVVSHDLRNPMTVISMLCGMMQKAFSSDGPHTSRR
ISTAIDTMQQAAGRMNTLLEDLLDTSKIDAGRYTIAPQKLDVAQMFEEAQSLLAPLALDKDISISFEADPDLSIHADPER
LFQVLSNLVGNAIKFTPRLGTVDVYAKSVGDDIVFTVRDSGEGIPKDHLPHVFDRYWTVKEGNPTGTGLGLYITQGIVEA
HGGQIVAESEPGQGSEFRFTVPRLD

Sequences:

>Translated_745_residues
MNPQDKEAFEELLANCADEPIRFPGAIQPHGLLLTLSEPDLSIIQISANVETLLARPAQELIGQPLQSLIGDAHAAQVRE
ALQQAALSDAPPLHFRLNGTAFEGLLHRHQDVLILELEIHVENFQPRNVAGTETHLGRMLARLQKAQSLQALYDISVKEI
QAMTGYDRVLIYRFEEEGHGQVIAEASDPSMEVFNGLFFPASDIPEQARELYRTNWLRIIPNADYQPVPLVPKLRPDTQT
PLDLSFATLRSVSPIHCQYMKNMGVLSSMSISLLKGDKLWGLISCGNRQPLHVPHELRTACQTIGQVLSLQISAMEALEV
SRQREEKLEALALLNQAMIDSPQNVFDGLANQPQVLMALANAGGIAIIEDKQLHRYGNCPEPEEIRALHKWLQERGEPVF
ASHHLASVYPPAAHYQQVASGVLAMSLPKPVDNGVLWFRPEVKENINWSGDPRKPLDLENSDAGLRLRPRTSFEIWKVEM
AGISTKWSHGDLFAANDLRRSALENDLARQVRREQEAVRARDELVAVVSHDLRNPMTVISMLCGMMQKAFSSDGPHTSRR
ISTAIDTMQQAAGRMNTLLEDLLDTSKIDAGRYTIAPQKLDVAQMFEEAQSLLAPLALDKDISISFEADPDLSIHADPER
LFQVLSNLVGNAIKFTPRLGTVDVYAKSVGDDIVFTVRDSGEGIPKDHLPHVFDRYWTVKEGNPTGTGLGLYITQGIVEA
HGGQIVAESEPGQGSEFRFTVPRLD
>Mature_745_residues
MNPQDKEAFEELLANCADEPIRFPGAIQPHGLLLTLSEPDLSIIQISANVETLLARPAQELIGQPLQSLIGDAHAAQVRE
ALQQAALSDAPPLHFRLNGTAFEGLLHRHQDVLILELEIHVENFQPRNVAGTETHLGRMLARLQKAQSLQALYDISVKEI
QAMTGYDRVLIYRFEEEGHGQVIAEASDPSMEVFNGLFFPASDIPEQARELYRTNWLRIIPNADYQPVPLVPKLRPDTQT
PLDLSFATLRSVSPIHCQYMKNMGVLSSMSISLLKGDKLWGLISCGNRQPLHVPHELRTACQTIGQVLSLQISAMEALEV
SRQREEKLEALALLNQAMIDSPQNVFDGLANQPQVLMALANAGGIAIIEDKQLHRYGNCPEPEEIRALHKWLQERGEPVF
ASHHLASVYPPAAHYQQVASGVLAMSLPKPVDNGVLWFRPEVKENINWSGDPRKPLDLENSDAGLRLRPRTSFEIWKVEM
AGISTKWSHGDLFAANDLRRSALENDLARQVRREQEAVRARDELVAVVSHDLRNPMTVISMLCGMMQKAFSSDGPHTSRR
ISTAIDTMQQAAGRMNTLLEDLLDTSKIDAGRYTIAPQKLDVAQMFEEAQSLLAPLALDKDISISFEADPDLSIHADPER
LFQVLSNLVGNAIKFTPRLGTVDVYAKSVGDDIVFTVRDSGEGIPKDHLPHVFDRYWTVKEGNPTGTGLGLYITQGIVEA
HGGQIVAESEPGQGSEFRFTVPRLD

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=248, Percent_Identity=31.4516129032258, Blast_Score=126, Evalue=6e-30,
Organism=Escherichia coli, GI1789149, Length=284, Percent_Identity=30.6338028169014, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=33.8775510204082, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1786600, Length=243, Percent_Identity=32.0987654320988, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1786912, Length=253, Percent_Identity=31.2252964426877, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1788713, Length=252, Percent_Identity=32.5396825396825, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI48994928, Length=282, Percent_Identity=30.4964539007092, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1788393, Length=242, Percent_Identity=26.4462809917355, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI87081816, Length=263, Percent_Identity=28.8973384030418, Blast_Score=92, Evalue=2e-19,
Organism=Escherichia coli, GI1786783, Length=235, Percent_Identity=24.6808510638298, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788549, Length=257, Percent_Identity=26.4591439688716, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1790861, Length=205, Percent_Identity=24.8780487804878, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1790346, Length=228, Percent_Identity=21.9298245614035, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787374, Length=229, Percent_Identity=25.3275109170306, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1790300, Length=254, Percent_Identity=27.9527559055118, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 82648; Mature: 82648

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS50109 HIS_KIN ; PS50046 PHYTOCHROME_2 ; PS00539 PYROKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQDKEAFEELLANCADEPIRFPGAIQPHGLLLTLSEPDLSIIQISANVETLLARPAQE
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHCHHHH
LIGQPLQSLIGDAHAAQVREALQQAALSDAPPLHFRLNGTAFEGLLHRHQDVLILELEIH
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEEEEE
VENFQPRNVAGTETHLGRMLARLQKAQSLQALYDISVKEIQAMTGYDRVLIYRFEEEGHG
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCC
QVIAEASDPSMEVFNGLFFPASDIPEQARELYRTNWLRIIPNADYQPVPLVPKLRPDTQT
EEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC
PLDLSFATLRSVSPIHCQYMKNMGVLSSMSISLLKGDKLWGLISCGNRQPLHVPHELRTA
CCCCHHHHHHCCCHHHHHHHHCCCCHHHCEEEEEECCCEEEEEECCCCCCCCCCHHHHHH
CQTIGQVLSLQISAMEALEVSRQREEKLEALALLNQAMIDSPQNVFDGLANQPQVLMALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEE
NAGGIAIIEDKQLHRYGNCPEPEEIRALHKWLQERGEPVFASHHLASVYPPAAHYQQVAS
CCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHCCCCHHHHHHHHC
GVLAMSLPKPVDNGVLWFRPEVKENINWSGDPRKPLDLENSDAGLRLRPRTSFEIWKVEM
CHHEEECCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEE
AGISTKWSHGDLFAANDLRRSALENDLARQVRREQEAVRARDELVAVVSHDLRNPMTVIS
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MLCGMMQKAFSSDGPHTSRRISTAIDTMQQAAGRMNTLLEDLLDTSKIDAGRYTIAPQKL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
DVAQMFEEAQSLLAPLALDKDISISFEADPDLSIHADPERLFQVLSNLVGNAIKFTPRLG
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHCCCEEECCCCC
TVDVYAKSVGDDIVFTVRDSGEGIPKDHLPHVFDRYWTVKEGNPTGTGLGLYITQGIVEA
CHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCEEEECCCCCCCCCHHHHHHHHHHH
HGGQIVAESEPGQGSEFRFTVPRLD
CCCEEEECCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MNPQDKEAFEELLANCADEPIRFPGAIQPHGLLLTLSEPDLSIIQISANVETLLARPAQE
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCHHHHHHCHHHH
LIGQPLQSLIGDAHAAQVREALQQAALSDAPPLHFRLNGTAFEGLLHRHQDVLILELEIH
HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEEEEE
VENFQPRNVAGTETHLGRMLARLQKAQSLQALYDISVKEIQAMTGYDRVLIYRFEEEGHG
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCCCC
QVIAEASDPSMEVFNGLFFPASDIPEQARELYRTNWLRIIPNADYQPVPLVPKLRPDTQT
EEEEECCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC
PLDLSFATLRSVSPIHCQYMKNMGVLSSMSISLLKGDKLWGLISCGNRQPLHVPHELRTA
CCCCHHHHHHCCCHHHHHHHHCCCCHHHCEEEEEECCCEEEEEECCCCCCCCCCHHHHHH
CQTIGQVLSLQISAMEALEVSRQREEKLEALALLNQAMIDSPQNVFDGLANQPQVLMALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEE
NAGGIAIIEDKQLHRYGNCPEPEEIRALHKWLQERGEPVFASHHLASVYPPAAHYQQVAS
CCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHCCCCHHHHHHHHC
GVLAMSLPKPVDNGVLWFRPEVKENINWSGDPRKPLDLENSDAGLRLRPRTSFEIWKVEM
CHHEEECCCCCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEE
AGISTKWSHGDLFAANDLRRSALENDLARQVRREQEAVRARDELVAVVSHDLRNPMTVIS
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MLCGMMQKAFSSDGPHTSRRISTAIDTMQQAAGRMNTLLEDLLDTSKIDAGRYTIAPQKL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
DVAQMFEEAQSLLAPLALDKDISISFEADPDLSIHADPERLFQVLSNLVGNAIKFTPRLG
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHCCCEEECCCCC
TVDVYAKSVGDDIVFTVRDSGEGIPKDHLPHVFDRYWTVKEGNPTGTGLGLYITQGIVEA
CHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCEEEECCCCCCCCCHHHHHHHHHHH
HGGQIVAESEPGQGSEFRFTVPRLD
CCCEEEECCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]